ID: uc010umh.1_intron_7_0_chr15_75632562_f.3p
GENE: (8)
chr15:75632970-75633219+


(2)
AGO2.ip
(1)
AGO3.ip
(2)
B-CELL
(2)
BRAIN
(2)
BREAST
(25)
CELL-LINE
(3)
CERVIX
(1)
HELA
(3)
LIVER
(1)
OTHER
(5)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
AGTTTCGCTCCTCTTGCCCAGGTTTCACTGCCATCTTGTTATTTATTTATTTTGAGATGGTACAGTGGCGTGATCTTGGCTCACCACAACCTCTGCCTCCTGGGTTCAAGCAATTCTTCTGCCTCAGCTGCCCGAGTAGGTGGGATTACAGGCATGCCCCACTACTCCCGGCTAATTTTGTTTTTTTTTTTTTTTTTCAGTAGAGATGAGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACC
..........................................................((...(((((((((..((((..((.((((...(((.((...((((((..(((.....)))..))).)))..))..)))...))))))...))))))))))..)))...))..................................................................................
........................................................57.............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189784SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040029(GSM532914)
G026T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
GSM532874(GSM532874)
G699T. (cervix)
SRR189782SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040015(GSM532900)
G623T. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
................................................................................................................................................................................TTTGTTTTTTTTTTTTTTTTTCAAAG................................................2611.000.00--4.00--3.004.00------------------------------------------
................................................................................................................................................................................TTTGTTTTTTTTTTTTTTTTTCCCC.................................................253.000.003.00------------------------------------------------
.............................................................ACAGTGGCGTGATCTTGGCTTT.......................................................................................................................................................................222.000.00-----------2.00-------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCGAG.................................................262.000.002.00------------------------------------------------
.................................................................................................................................................................................TTGTTTTTTTTTTTTTTTTTCATTCT...............................................262.000.002.00------------------------------------------------
..............................................................................................................................................................................ATTTTGTTTTTTTTTTTTTTTTTCTT..................................................262.000.00--2.00----------------------------------------------
.............................................TTTATTTTGAGATGGTAGGTT........................................................................................................................................................................................212.000.00--------------------2.00----------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCCTT.................................................262.000.001.00-1.00----------------------------------------------
..............................................................................................................................................................................ATTTTGTTTTTTTTTTTTTTTTGGGG..................................................261.000.001.00------------------------------------------------
.............................................................ACAGTGGCGTGATCTTGGCTCGG......................................................................................................................................................................231.000.00---------1.00---------------------------------------
....................................................TGAGATGGTACAGTGGCGTGATCTTGGCCC........................................................................................................................................................................301.000.00-1.00-----------------------------------------------
........................................................................ATCTTGGCTCACCACGACA...............................................................................................................................................................191.000.00---------------------1.00---------------------------
....................................................................................................................................................................................TTTTTTTTTTTTTTTTTCAGTAGAT.............................................251.000.001.00------------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCGGAG................................................271.000.00--1.00----------------------------------------------
.................................................................................................................................................................................TTGTTTTTTTTTTTTTTTTTCAGTAG...............................................2611.001.00--1.00----------------------------------------------
..............................................................................................................................................................................ATTTTGTTTTTTTTTTTTTTTTTCTACC................................................281.000.00--1.00----------------------------------------------
....................................................................................................................................................................................................TCAGTAGAGATGAGGAGGA...................................191.000.00---------------------------1.00---------------------
..................................................................................................................................................................................TGTTTTTTTTTTTTTTTTTCAGGG................................................241.000.001.00------------------------------------------------
................................................................................................................................................................................................................AGGTTTCTCCATGTTGGTCAGGCTGCCTC.............291.000.00-1.00-----------------------------------------------
.......................................................................................................................................................................................TTTTTTTTTTTTTTCAGTAGAGGGG..........................................251.000.001.00------------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCAACT................................................271.000.00-1.00-----------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCGG..................................................251.000.001.00------------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCAGTT................................................271.000.001.00------------------------------------------------
................................................................................................................................................................................TTTGTTTTTTTTTTTTTTTTTCCCCG................................................261.000.00--1.00----------------------------------------------
......................................................................................................................................................................CCCGGCTAATTTTGTTTTTTTCT.............................................................231.000.00--1.00----------------------------------------------
.................................................................................................................................................................................................TTTTCAGTAGAGATGAGGAC.....................................201.000.00-1.00-----------------------------------------------
.............................................................ACAGTGGCGTGATCTTGGCTCACAGT...................................................................................................................................................................2601.001.00-1.00-----------------------------------------------
.........................................................................................................................................................................................................................CATGTTGGTCAGGCTGGTCTCGACC........251.000.00----------------------------1.00--------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCGGTG................................................271.000.001.00------------------------------------------------
.............................................................................................................................................................................................................................TTGGTCAGGCTGGTCTCGAACTCGAG...261.000.00---------1.00---------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCGGGT................................................271.000.001.00------------------------------------------------
.................................................................................................................................................................................................................................TCAGGCTGGTCTCGAACGCCC....211.000.00-------1.00-----------------------------------------
....................................................................................................................................................................................TTTTTTTTTTTTTTTTTCAGTACCC.............................................251.000.00----1.00--------------------------------------------
..................................................................................................................................................................................TGTTTTTTTTTTTTTTTTTCCGG.................................................231.000.001.00------------------------------------------------
...................................................................................................CTGGGTTCAAGCAATTCTTCTGCCTCCGCT.........................................................................................................................301.000.00--------------------------------1.00----------------
...............GCCCAGGTTTCACTGCCATCCA.....................................................................................................................................................................................................................221.000.00----------------------------------------1.00--------
................................................................................................................................................................................TTTGTTTTTTTTTTTTTTTTTCCTTG................................................261.000.00--1.00----------------------------------------------
.............................................................................................................................................................................AATTTTGTTTTTTTTTTTTTTTTTTTTC.................................................281.000.00-1.00-----------------------------------------------
..............................................................................................................................................................................................................TGAGGTTTCTCCATGTATAG........................201.000.00------------------------------1.00------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCAAAGG...............................................281.000.001.00------------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCATT.................................................261.000.00-1.00-----------------------------------------------
..............................................................................................................................................................................ATTTTGTTTTTTTTTTTTTGCCC.....................................................231.000.00-1.00-----------------------------------------------
...........................................................................TTGGCTCACCACAACCTCTGCCTCCTGTT..................................................................................................................................................291.000.00-------------------------1.00-----------------------
..................................................................................ACCACAACCTCTGCCTCCTGGTCTC...............................................................................................................................................251.000.00-1.00-----------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCGGGC................................................271.000.001.00------------------------------------------------
..............................................................................................................................................................................ATTTTGTTTTTTTTTTTTTTTGAGC...................................................251.000.00-1.00-----------------------------------------------
...................................................................................................................................................................................GTTTTTTTTTTTTTTTTTCACTTG...............................................241.000.00----------1.00--------------------------------------
................................................................................................................................................................................TTTGTTTTTTTTTTTTTTTTTCACGCC...............................................271.000.001.00------------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCCCCG................................................271.000.001.00------------------------------------------------
...........................................................................TTGGCTCACCACAACCTCTGCCTCCTGTTTC................................................................................................................................................311.000.00-1.00-----------------------------------------------
......................................................................................................................................................................................TTTTTTTTTTTTTTTCAGTAGCTTG...........................................251.000.00--1.00----------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCGGTT................................................271.000.001.00------------------------------------------------
..................................................................................................................................................................................TGTTTTTTTTTTTTTTTTTCAGAGG...............................................251.000.001.00------------------------------------------------
..............................................................................................................................................................................ATTTTGTTTTTTTTTTTTTTTTGGAC..................................................261.000.00-1.00-----------------------------------------------
......................................................................................................................................AGTAGGTGGGATTACAGGCAGGAA............................................................................................241.000.00-----------------------------------------1.00-------
...........................................................................................................................................................................CTAATTTTGTTTTTTTTTTTTCTA.......................................................241.000.00--1.00----------------------------------------------
...................................................................................................................................................................................................TTCAGTAGAGATGAGCGG.....................................181.000.00-------------------------------------------1.00-----
...........................................................................................................................................GTGGGATTACAGGCATGT.............................................................................................181.000.00-------1.00-----------------------------------------
.................................................................................................................................................................................TTGTTTTTTTTTTTTTTTTTCAGTACTAG............................................291.000.00--1.00----------------------------------------------
...................................................................................................................................................................................GTTTTTTTTTTTTTTTTTCACCG................................................231.000.001.00------------------------------------------------
........................................................................ATCTTGGCTCACCACAACCTCTGCCGGG......................................................................................................................................................281.000.001.00------------------------------------------------
.......................................................................................................................................................................................................................TCCATGTTGGTCAGGGTAA................191.000.00---------------------------------------------1.00---
.................................................................................................................................................................................TTGTTTTTTTTTTTTTTTTTCAGTTCAG.............................................281.000.001.00------------------------------------------------
.............................................................ACAGTGGCGTGATCTTGGCTCAC......................................................................................................................................................................2301.001.00--------1.00----------------------------------------
.......................................................................................................................................................................................................................TCCATGTTGGTCAGGGAAC................191.000.00---------------------1.00---------------------------
.............................................................................................................................................................................................................................TTGGTCAGGCTGGTCTCGCAA........211.000.00--------------------------------------------1.00----
......................................................................TGATCTTGGCTCACCACAACCTCTGCCTTG......................................................................................................................................................301.000.001.00------------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCCGCG................................................271.000.001.00------------------------------------------------
..................................................................................................................................................................................................................GTTTCTCCATGTTGGTCAGGCTGGAAG.............271.000.00----------------------------------------------1.00--
................................................................................................................................................................................TTTGTTTTTTTTTTTTTTTTTCCGGC................................................261.000.001.00------------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCGGC.................................................261.000.00-1.00-----------------------------------------------
...............GCCCAGGTTTCACTGGCAT........................................................................................................................................................................................................................191.000.00--------------------------1.00----------------------
..................................................................................................................................................................................TGTTTTTTTTTTTTTTTTTCAAAG................................................241.000.001.00------------------------------------------------
.............................................................................................................................................................................AATTTTGTTTTTTTTTTTTTTTTTACTT.................................................281.000.001.00------------------------------------------------
.....................................................................................................................................................................................TTTTTTTTTTTTTTTTCAGTAGTCTG...........................................261.000.001.00------------------------------------------------
.....................................................................................................................................GAGTAGGTGGGATTAAAGT..................................................................................................191.000.00---------------------------------------1.00---------
...........................................................................................................................................................................CTAATTTTGTTTTTTTTTTGG..........................................................211.000.00----------1.00--------------------------------------
......................................................................................................................................................................CCCGGCTAATTTTGTTTTCTC...............................................................211.000.00--1.00----------------------------------------------
....................................................................................................................................................................................TTTTTTTTTTTTTTTTTCAGTAACTG............................................261.000.00----------1.00--------------------------------------
.................................................................................................................................................................................TTGTTTTTTTTTTTTTTTTTCAGGG................................................251.000.001.00------------------------------------------------
..............................................................................................................................................................................ATTTTGTTTTTTTTTTTTTTTTTCAGTG................................................281.000.00-1.00-----------------------------------------------
..............................................................................................................................................................................................................................TGGTCAGGCTGGTCTCGCCA........201.000.00------------------------------------------1.00------
................................................................................................................................................................................TTTGTTTTTTTTTTTTTTTTTCCGC.................................................251.000.001.00------------------------------------------------
.............................................................................................................................................................................AATTTTGTTTTTTTTTTTTTCTTA.....................................................241.000.00--1.00----------------------------------------------
..................................................................................ACCACAACCTCTGCCTCCTTTC..................................................................................................................................................221.000.00-1.00-----------------------------------------------
.................................................................................................................................................................................TTGTTTTTTTTTTTTTTTTTCAGGGG...............................................261.000.001.00------------------------------------------------
..............................................................................................................................................................................................................TGAGGTTTCTCCATGTTGGTCAGGCTAGCC..............301.000.00-1.00-----------------------------------------------
..................................................................................................................................................................................TGTTTTTTTTTTTTTTTTTCACCC................................................241.000.001.00------------------------------------------------
..................................................................................................................................................................................................TTTCAGTAGAGATGAGGTTTCAGG................................241.000.001.00------------------------------------------------
.............................................................................................................................................................................AATTTTGTTTTTTTTTTTTTTTTACTT..................................................271.000.001.00------------------------------------------------
.............................................................................................................................................................................AATTTTGTTTTTTTTTTTTTTTCT.....................................................241.000.00--1.00----------------------------------------------
.......................................................................................................................................................................................TTTTTTTTTTTTTTCAGTACGG.............................................221.000.00-----1.00-------------------------------------------
...................................................................................................................................................ACAGGCATGCCCCACTACTCCCGGCC.............................................................................261.000.00-1.00-----------------------------------------------
..........................................................................................................................................................................GCTAATTTTGTTTTTTTTTTTTTTTTTTTTG.................................................311.000.00-----1.00-------------------------------------------
..........................................................................................................................................................................................TTTTTTTTTTTCAGTAGA..............................................1801.001.00---1.00---------------------------------------------
.......................................................................................................................................GTAGGTGGGATTACAG...................................................................................................1601.001.00---------------1.00---------------------------------
..................................................................................................................................................................................TGTTTTTTTTTTTTTTTTTCCCTC................................................241.000.00-1.00-----------------------------------------------
......................................................................................................................................AGTAGGTGGGATTACAGGCCCT..............................................................................................221.000.00-1.00-----------------------------------------------
..............................................................................................................................................................................................................................TGGTCAGGCTGGTCTCGAACGC......221.000.00-----------------------1.00-------------------------
............................................................TACAGTGGCGTGATCTTGGCTCACGC....................................................................................................................................................................261.000.001.00------------------------------------------------
..............................................................................................................................................................................ATTTTGTTTTTTTTTTTTTTTTTCCC..................................................261.000.001.00------------------------------------------------
...........................................................................................................................................................................CTAATTTTGTTTTTTTTTTTTTTTTTCAGTAG...............................................3211.001.00-1.00-----------------------------------------------
...............GCCCAGGTTTCACTGTAGT........................................................................................................................................................................................................................191.000.00-----------------------------------------------1.00-
...........................................................................................................................................GTGGGATTACAGGCATGC.............................................................................................1801.001.00---1.00---------------------------------------------
......................................................................................................................................................................CCCGGCTAATTTTGTTTTTTTTTTCG..........................................................261.000.00--1.00----------------------------------------------
.................................................................................................................................................................................TTGTTTTTTTTTTTTTTTTTCATTA................................................251.000.00--1.00----------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCAG..................................................2540.500.50--0.25---0.25------------------------------------------
.............................................................................................................................................................................AATTTTGTTTTTTTTTTTTTTTTTC....................................................2520.500.500.50------------------------------------------------
.............................................................................................................................................................................AATTTTGTTTTTTTTTTTTTTTTTCGCT.................................................2820.500.50-0.50-----------------------------------------------
...................................................................................................................................................................................GTTTTTTTTTTTTTTTTTCAGTAG...............................................2430.330.33-0.33-----------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCAGGG................................................2740.250.500.25------------------------------------------------
................................................................................................................................................................................TTTGTTTTTTTTTTTTTTTTTCAG..................................................2470.140.14-0.14-----------------------------------------------

Antisense strand
AGTTTCGCTCCTCTTGCCCAGGTTTCACTGCCATCTTGTTATTTATTTATTTTGAGATGGTACAGTGGCGTGATCTTGGCTCACCACAACCTCTGCCTCCTGGGTTCAAGCAATTCTTCTGCCTCAGCTGCCCGAGTAGGTGGGATTACAGGCATGCCCCACTACTCCCGGCTAATTTTGTTTTTTTTTTTTTTTTTCAGTAGAGATGAGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACC
..........................................................((...(((((((((..((((..((.((((...(((.((...((((((..(((.....)))..))).)))..))..)))...))))))...))))))))))..)))...))..................................................................................
........................................................57.............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189784SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040029(GSM532914)
G026T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
GSM532874(GSM532874)
G699T. (cervix)
SRR189782SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040015(GSM532900)
G623T. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
..............................................................................................................................................................................................................TGAGGTTTCTCCATGTTGGTCACT.................... 244.000.00----3.00---------1.00----------------------------------
.....................................................................................................................................................................................................................TCTCCATGTTGGTCAGGCTGGTCTCGAACGAG..... 322.000.00-------------2.00-----------------------------------
.........................................................................................CCTCTGCCTCCTGGGTTCAAGCAAGCG...................................................................................................................................... 272.000.001.001.00-----------------------------------------------
.........................................................................................CCTCTGCCTCCTGGGTTCAAGCAAAC....................................................................................................................................... 262.000.00-2.00-----------------------------------------------
.........................................................................................CCTCTGCCTCCTGGGTTCAAGCAGCG....................................................................................................................................... 262.000.001.001.00-----------------------------------------------
..........................................................................................................................................................................................................................ATGTTGGTCAGGCTGGTCTCGAACTCGC.... 282.000.00-2.00-----------------------------------------------
..........................................................................................CTCTGCCTCCTGGGTTCAAGCAATCG...................................................................................................................................... 261.000.00-1.00-----------------------------------------------
.................................................................................................TCCTGGGTTCAAGCAATTCTTCAGC................................................................................................................................ 251.000.00------------------------1.00------------------------
.........................................................................................CCTCTGCCTCCTGGGTTCAAGCAATTCTGCG.................................................................................................................................. 311.000.00-1.00-----------------------------------------------
.........................................................................................CCTCTGCCTCCTGGGTTCAAGCAG......................................................................................................................................... 241.000.00--------1.00----------------------------------------
.................................................................................................AAGAATTGCTTGAACCCAGGA.................................................................................................................................... 2101.001.00---1.00---------------------------------------------
......................................................................................................................................................................................TTTTTTTTTTTTTTTCAGTTGT.............................................. 221.000.00-------------------1.00-----------------------------
..............................................................................................................CAATTCTTCTGCCTCAGCTAA....................................................................................................................... 211.000.00--------------------------------------1.00----------
.........................................................................................CCTCTGCCTCCTGGGTTCAAGCAATACG..................................................................................................................................... 281.000.001.00------------------------------------------------
....................................................................................CACAACCTCTGCCTCCTCGA.................................................................................................................................................. 201.000.00-1.00-----------------------------------------------
.........................................................................................AGAAGAATTGCTTGAACCCAGGAGGCAGAGG.................................................................................................................................. 3101.001.00---1.00---------------------------------------------
..............................................................................................................................................................CCACTACTCCCGGCTAATGCG....................................................................... 211.000.00-------------------------------------1.00-----------
.............................................................................................................................AGCTGCCCGAGTAGGTGGAAGT....................................................................................................... 221.000.00----1.00--------------------------------------------
...................................................................................................................................................ACAGGCATGCCCCACTCC..................................................................................... 181.000.00-------------------------------1.00-----------------
....................................................................................CACAACCTCTGCCTCCTGAACC................................................................................................................................................ 221.000.00------------1.00------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTCACAT................................................ 271.000.00-----------------------------1.00-------------------
.........................................................................................................AGCTGAGGCAGAAGAATTGCTTGA......................................................................................................................... 2401.001.00-------1.00-----------------------------------------
...............................................................AGTGGCGTGATCTTGGCCG........................................................................................................................................................................ 191.000.00----------------------1.00--------------------------
...............................................................................................AAGAATTGCTTGAACCCAGGAGG.................................................................................................................................... 2301.001.00------------------1.00------------------------------
.......................................................................................................................................................................................TTTTTTTTTTTTTTCAGTTTTT............................................. 221.000.00-----------------1.00-------------------------------
.........................................................................................................................................................................................................................CATGTTGGTCAGGCTGGTCTCGAACTCGA.... 291.000.001.00------------------------------------------------
...................................................................................................CTGGGTTCAAGCAATTCTTAATG................................................................................................................................ 231.000.00------------1.00------------------------------------
..............................................................................................GCCTCCTGGGTTCAAGCAATTCTTCTGCGGAG............................................................................................................................ 321.000.00---------------1.00---------------------------------
......................................................................................................................................................................................TTTTTTTTTTTTTTTCAGTTTTT............................................. 231.000.00-----------------1.00-------------------------------
..............................................................................................................................................................CCACTACTCCCGGCTAATTTTGCG.................................................................... 241.000.001.00------------------------------------------------
.........................................................................................CCTCTGCCTCCTGGGTTCAAGCAATGCAG.................................................................................................................................... 291.000.001.00------------------------------------------------
.....................................................................................................................................................................................................................TCTCCATGTTGGTCAGGCTGGTCTCGAACTCGG.... 331.000.00-----------------------------------1.00-------------
.....................................................................................................................................................................................TTTTTTTTTTTTTTTTCAGTAGATG............................................ 251.000.00-------------------1.00-----------------------------
................................................................................AACCCAGGAGGCAGAGGTTGTGGTGA................................................................................................................................................ 2601.001.00--------1.00----------------------------------------
.........................................................................................CCTCTGCCTCCTGGGTTCAAAT........................................................................................................................................... 221.000.00---1.00---------------------------------------------
........................................................................................ACCTCTGCCTCCTGGGTTCAAGCAATCGG..................................................................................................................................... 291.000.001.00------------------------------------------------
..............................................................................................................................................................CCACTACTCCCGGCTAATTGCG...................................................................... 221.000.00-1.00-----------------------------------------------
....................................................................................................................................................................................TTTTTTTTTTTTTTTTTCAGTAGGAA............................................ 261.000.00----------------------------------1.00--------------
...............................................................................................................................................................................................................GAGGTTTCTCCATGTTGGTCAGGCTGGTCTCCC.......... 331.000.001.00------------------------------------------------
.......................................................................................................................................................................................TCTACTGAAAAAAAAAAAAAA.............................................. 2101.001.00---------------------------------1.00---------------
.........................................................................................CCTCTGCCTCCTGGGTTCAAGCAAC........................................................................................................................................ 251.000.00-1.00-----------------------------------------------
.........................................................................................CCTCTGCCTCCTGGGTTCAAGAA.......................................................................................................................................... 231.000.00---------1.00---------------------------------------
............................................................................................CTGCCTCCTGGGTTCAAGCAAGCC...................................................................................................................................... 241.000.001.00------------------------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTGTGA................................................. 261.000.00----------------1.00--------------------------------
...........................................................................GAGGCAGAGGTTGTGGTGAGCCAA....................................................................................................................................................... 2401.001.00--------1.00----------------------------------------
..............................................................................................................................................................................................................TGAGGTTTCTCCATGTCTA......................... 191.000.00-1.00-----------------------------------------------
......................................................................................CAACCTCTGCCTCCTGGGTTCAAGCAAGCCG..................................................................................................................................... 311.000.001.00------------------------------------------------
...............................................................................CCAGGAGGCAGAGGTTGTGGTGAG................................................................................................................................................... 2401.001.00---1.00---------------------------------------------
...................................................................................................................................................ACAGGCATGCCCCACTCTA.................................................................................... 191.000.00-1.00-----------------------------------------------
......................................................................................................................................................................................................................CTCCATGTTGGTCAGGTGTC................ 201.000.00------------------------------------1.00------------
..............................................................................................CAGAAGAATTGCTTGAACCCAGGAGGC................................................................................................................................. 2701.001.00------------------1.00------------------------------
......................................................................................................................CTGCCTCAGCTGCCCGAGTGCAG............................................................................................................. 231.000.00--------------1.00----------------------------------
...............................................................................................................................................................................TTTTGTTTTTTTTTTTTTTTTTGCGA................................................. 261.000.00----------------1.00--------------------------------
.............................................................................................TGCCTCCTGGGTTCAAGCAATTCTC.................................................................................................................................... 251.000.00-------1.00-----------------------------------------
.....................ACAAGATGGCAGTGAAAC................................................................................................................................................................................................................... 1820.500.50------------------------------------------------0.50
..................................................................................................................TCGGGCAGCTGAGGCAGAAGA................................................................................................................... 2130.330.33-----------0.33-------------------------------------