ID: uc010soh.1_intron_5_0_chr12_53849278_f
GENE: PCBP2(6)
chr12:53849228-53849718+


(1)
AGO2.ip 		(1)
AGO3.ip 		(2)
B-CELL 		(2)
BRAIN 		(14)
BREAST 		(23)
CELL-LINE 		(6)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(4)
HELA 		(7)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(27)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGACTTTTCCTTTACAGAAAGGAGAATCAGTTAAGAAGATGCGCGAGGAGGTAAGTTATGAAAGACTGAGATTGTTAACTTTGGGAAGTAAAAAACCTTTAAAACAAGTGAAAATTCTTTTTCAGAAATTAGGAAGGTCTCAATAAGGGAAATATGTATTTTTTTTCGGCTTGGTTATTTGTAGTGATAATCTGGGGAGTGTATTTTTTTTTTCCCCTTTTTGGGAAGTGTGGTTTTGACAAGTCAGAATTCTTTCAAGACTTAAGGCAGCTGCTGTAGGCTATCTTTGAGGATAGTCATGGAGCAGTAGTGTTTGGAATGATGCTGACTTTGCTTTGCATCAGGATCATGTACATTGGCAGTCTTATAAGGGACTGTAGATCCTGTACATACTCAGATCTTCTTTGTTTTAACTTCTTTTGGATCTTGTTTCCTATCTAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTCCTGAGAGAATTAT
..................................................................................................................................................................................................................((((((......))))))...((((((((.(((........)))))))))))...(((....)))........................................................................................................................................................................................................................
......................................................................................................................................................................................................199............................................................................278...................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189782SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037936(GSM510474)
293cand1. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR040008(GSM532893)
G727N. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		TAX577746(Rovira)
total RNA. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577741(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR040043(GSM532928)
G428T. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR029128(GSM416757)
H520. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189784
................................................................................................................................................................................................................................................................AAGACTTAAGGCAGCGGC.........................................................................................................................................................................................................................187.000.00-7.00---------------------------------------------------------------------------------------------
.................................AGAAGATGCGCGAGGAGGTAAGTTATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003.00----------2.00---------------------------------1.00--------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAATTGTCCTGAGAGA.....1923.003.00------------------1.00-----------------------------0.50--0.50------------------0.50---------------0.50--------
........................................................................................................................................................TATGTATTTTTTTTCGGCTTGGTTATTCG......................................................................................................................................................................................................................................................................................................................293.000.003.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................TTTTCGGCTTGGTTATTTGTAGTGATAATC...........................................................................................................................................................................................................................................................................................................3013.003.00-------3.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTAACTTCTTTTGGATCTTGTTTCCTAT......................................................3212.002.00--------------------------1.00-----------------------1.00--------------------------------------------
..............................TTAAGAAGATGCGCGAGGAGGTAAGTTACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................302.000.00---2.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................AGGGACTGTAGATCCTGTACATACTCGATC............................................................................................302.000.00---------1.00-----------------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................................................GGAAGTGTGGTTTTGACAAGTCAGAATTCTTT............................................................................................................................................................................................................................................3212.002.00-------------2.00---------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAATTGTCCTGAGAGA.....1822.002.00------------------0.50---------------------------------------------0.50-------0.50----0.50-----------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTTTGGATCTTGTTTCCTATCTAG..................................................2812.002.00--------2.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAATTGTCCTGAGAGAATT..2121.501.50--1.50--------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTCCTGAGAGAATT..1821.501.50-----------------1.00--0.50--------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCTCAGAAGGGAATTGTC.............2221.501.50--1.50--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTATCAACATCTCATAA.......................191.000.00----1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................GGGACTGTAGATCCTGTACATACTCGATC............................................................................................291.000.00---------1.00-------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................AGGCAGCTGCTGTAGGCTATCCTTG..........................................................................................................................................................................................................251.000.00---1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTATCAACATCTCAGAAGG.....................2211.001.00--------------------------------------1.00--------------------------------------------------------
...........................................................................................................................................................................................................TTTTTTTTTTCCCCTTTTTGGTG.........................................................................................................................................................................................................................................................................231.000.00---1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAATTGTCCTGAGAGAATT..2221.001.00-----------------------------------------------------0.50-------------------0.50---------------------
......................................................................................................................................................................................................................................................................................................................................................................................CTGTAGATCCTGTACATACTCAGATC...........................................................................................2611.001.00-----------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................ATTTTTTTTCGGCTTGGTTATTTGCAG...................................................................................................................................................................................................................................................................................................................271.000.00---1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGGAATTGTCCTGAGAGA.....2221.001.00----------------------------------------------------0.50------------0.50-----------------------------
...............................................................................................................................................................................................................................................................................................................................................TTGCATCAGGATCATG............................................................................................................................................1611.001.00---------------1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAATTGTCCTGAGAGAA....1921.001.00--1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................AGGGACTGTAGATCCTGTACATACTCAGATC...........................................................................................3111.001.00--------------1.00--------------------------------------------------------------------------------
..............................................................AGACTGAGATTGTTAACTTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------------1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GCAGCTGCTGTAGGCTATCTCTG..........................................................................................................................................................................................................231.000.001.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GGGAAGTGTGGTTTTTTTA..........................................................................................................................................................................................................................................................191.000.00-------------------------------------------------1.00---------------------------------------------
..............................TTAAGAAGATGCGCGAGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------1.00-------------------------------------------------
.........................................................................................................................................................................................................TATTTTTTTTTTCCCCGTC...............................................................................................................................................................................................................................................................................191.000.001.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................ATGTATTTTTTTTCGGCTTGGTTACTTG......................................................................................................................................................................................................................................................................................................................281.000.001.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TGTAGTGATAATCTGGGGAG....................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------1.00----------------------------------------------------------
...........................................................................................................................................................................................................TTTTTTTTTTCCCCTTTTTGGAC.........................................................................................................................................................................................................................................................................231.000.00---1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................CAAGACTTAAGGCAGCTGAA........................................................................................................................................................................................................................201.000.00-----------------------------------------1.00-----------------------------------------------------
.............................................................AAGACTGAGATTGTTAACTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------1.00-------------------------------------------------------------
.............................................................AAGACTGAGATTGTTAACTTTGGGAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00--------------1.00--------------------------------------------------------------------------------
...........................CAGTTAAGAAGATGCGCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.001.00------------1.00----------------------------------------------------------------------------------
............................................................................................................................................................................................................................TTGGGAAGTGTGGTTTTGACAAGT.......................................................................................................................................................................................................................................................2411.001.00-------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTCCTGAGAGAAT...1821.001.00------------------------------------------------------------0.50------------------0.50---------------
..............................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTTGTTTTAACTTCTTTT......................................................................2311.001.00---------------------------1.00-------------------------------------------------------------------
..........................................................................................................................................................................................................ATTTTTTTTTTCCCCTTTTAC............................................................................................................................................................................................................................................................................211.000.00-----------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................TATAAGGGACTGTAGATCCTGTACATACTCAGATCTTCTTTGTTTTAACTTCTTTTGGATCTTGTTTCCTATCTAG..................................................7611.001.00------------------------------------------1.00----------------------------------------------------
...................AGGAGAATCAGTTAAGAAGATGCGCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.001.00-----------------------------------------------1.00-----------------------------------------------
..................AAGGAGAATCAGTTAAGAAGATGCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.001.00------------------------------------------------0.50--------------------------0.50-------------------
..........................................................................................................................................................................................................ATTTTTTTTTTCCCCTTTTTT............................................................................................................................................................................................................................................................................211.000.00-----------1.00-----------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCACGTATCAACATCTCAGAAGG.....................2611.001.00------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAACATCTCAGAAG......................1821.001.00----------------0.50-------0.50----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................AGGATCATGTACATTGGCAGT................................................................................................................................2111.001.00----------------------------------------------1.00------------------------------------------------
.................................................................................................................................................................................................................TTTTCCCCTTTTTGGGGGGT......................................................................................................................................................................................................................................................................201.000.001.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................TGTATTTTTTTTCGGCTTGGTTATTT.......................................................................................................................................................................................................................................................................................................................2611.001.00--1.00--------------------------------------------------------------------------------------------
..................................................................TGAGATTGTTAACTTTGGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------1.00------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................GCTGCTGTAGGCTATCTTTGAG........................................................................................................................................................................................................2211.001.00-------------------------1.00---------------------------------------------------------------------
................GAAAGGAGAATCAGTTAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.001.00-------------------1.00---------------------------------------------------------------------------
..................................................GTAAGTTATGAAAGACTGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------1.00-------------------------------------------------------------------------
...................................AAGATGCGCGAGGAGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------1.00-----------------------------------------------------------------
........................................................TATGAAAGACTGAGATTGTTAACTTTGGGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................3211.001.00----------------------------------1.00------------------------------------------------------------
..................................................GTAAGTTATGAAAGACTGAGATTGTTAACT...........................................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00----------------------------------------1.00------------------------------------------------------
.........................ATCAGTTAAGAAGATGCGCGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.001.00----------0.50------0.50-----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................TGCTGTAGGCTATCTTCTC.........................................................................................................................................................................................................191.000.00------------------------------1.00----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................AGTCATGGAGCAGTAGTGTTTGGAATGATGC......................................................................................................................................................................3111.001.00-------------------------------1.00---------------------------------------------------------------
..........................................................................................................................................................................................................ATTTTTTTTTTCCCCTTTGGAG...........................................................................................................................................................................................................................................................................221.000.001.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCTCAGAAGGGAATTGTCCGAG.........251.000.001.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCTCAGAAGGGAATTGTCC............2320.500.50-----------------------------------------------------------0.50-----------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAATTGTCCTGAGAGAAT...2020.500.50-----------------------------------------------------------------------0.50-----------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAGGGAATTGTCCTGAG........2120.500.50-------------------------------------------------------------------------------------0.50---------
................................AAGAAGATGCGCGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.500.50--------------------------------------------------------------------------0.50--------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGGAATTGTCCTGAGAGAAT...2520.500.50----------------0.50------------------------------------------------------------------------------
......................AGAATCAGTTAAGAAGATGCGCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.500.50---------------------------------------------------------------0.50-------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAATTGTCCTGAGAGAATTA.2220.500.50--0.50--------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAATTGTCCTGAGAGAAT...2120.500.50-------------------------------------------------------------------0.50---------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAGGGAATTGTCCTGAGAG......2320.500.50---------------------------------------------------------0.50-------------------------------------
.................AAAGGAGAATCAGTTAAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.500.50-------------------0.50---------------------------------------------------------------------------
...............AGAAAGGAGAATCAGTTAAGAAGATGCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................3020.500.50-------------------------------------------------------0.50---------------------------------------
.................AAAGGAGAATCAGTTAAGAAGATGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.500.50---------------------------------------------------------------------------------0.50-------------
...........................CAGTTAAGAAGATGCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.500.50--0.50--------------------------------------------------------------------------------------------
...........................CAGTTAAGAAGATGCGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.500.50--------------------------------------------------------0.50--------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGGAATTGTCCTGAGAGA.....2320.500.50----------------0.50------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATTGTCCTGAGAGAATTA.2120.500.50-------------------------------------------0.50---------------------------------------------------
..................AAGGAGAATCAGTTAAGAAGATGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.500.50---------0.50-------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGGAATTGTCCTGAGA.......2020.500.50--------------------------------------------------------------------------------0.50--------------
.................AAAGGAGAATCAGTTAAGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.500.50-------------------------------------------0.50---------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGGAATTGTCCTGA.........1820.500.50----------------------------------------------------------------------------------0.50------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAATTGTCCTGAGAG......1820.500.50-------------------------------------------------------------0.50---------------------------------
......................................................GTTATGAAAGACTGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................1720.500.50---------------------------------------------------------------------------------------0.50-------
.............................GTTAAGAAGATGCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.500.50----------------------0.50------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTCCTGAGAGAA....1720.500.50----------------------0.50------------------------------------------------------------------------
..................AAGGAGAATCAGTTAAGAAGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.500.50---------------------0.50-------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAATTGTCCTGAGAG......1720.500.50------------------------0.50----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACATCTCAGAAGGGAATTGTCCTG..........2720.500.500.50----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGGAATTGTCCTGAGAGAA....2320.500.50----------------------------------------------------------------------------0.50------------------
...................AGGAGAATCAGTTAAGAAGATGCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.500.50--0.50--------------------------------------------------------------------------------------------
.................AAAGGAGAATCAGTTAAGAAGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.500.50--------------------------------------------------------------------0.50--------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAGGGAATTGTCCTGAGA.......2220.500.50-----------------------0.50-----------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTCCTGAGAGAAT...1720.500.50----------------------0.50------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGAAGGGAATTGTCCTGAGA.......2420.500.50--------------------------------------------------------------0.50--------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTCCTGAGAGAATTA.1920.500.50---------------------------------------------------------------------0.50-------------------------
.................AAAGGAGAATCAGTTAAGAAGATGCGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.500.50------------------------------------------------------------------0.50----------------------------
..................AAGGAGAATCAGTTAAGAAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.500.50-----------------------------------------------------------------------------------0.50-----------
..................AAGGAGAATCAGTTAAGAAGATGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.500.50------------------------------------------------------------------------------0.50----------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCTCAGAAGGGAATTG...............2120.500.50------------------------------------------------------0.50----------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAGGGAATTGTCCTGAGAGA.....2420.500.50------------------------------------------------------------------------------------0.50----------
.............................GTTAAGAAGATGCGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1720.500.50--------0.50--------------------------------------------------------------------------------------
...................AGGAGAATCAGTTAAGAAGATGCGCGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.500.50----------------------------------------------------------0.50------------------------------------
........................AATCAGTTAAGAAGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1730.330.33-----0.33-----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTCCTGAGAGAA....1630.330.33-----------------------0.33-----------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGAATTGTCCTGAGA.......1830.330.33-----------------------------------------------------------------------------------------0.33-----
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACATCTCAGAAGGGAA..................1930.330.33-----------------0.33-----------------------------------------------------------------------------
............................AGTTAAGAAGATGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.330.33----------------0.33------------------------------------------------------------------------------
.................AAAGGAGAATCAGTTAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.330.33----------------------------------------------------------------------------------------0.33------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCTCAGAAGGGAATTG...............1930.330.33--0.33--------------------------------------------------------------------------------------------
..............................................................................................................................................................TTTTTTTTCGGCTTGG.............................................................................................................................................................................................................................................................................................................................1640.250.250.25----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTCCTGAGAGA.....1640.250.25-----------------------0.25-----------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCTATCTAGAG................................................1540.250.25------------------------------------------------------------------------------------------0.25----
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTCCTGAGAGATGG..1940.250.25-------------------------------------------------------------------------------------------0.25---
..............................................................................................................................................................TTTTTTTTCGGCTTGACTC..........................................................................................................................................................................................................................................................................................................................1990.220.110.11---------------------------------------------------------------------------------------------0.11
.....................................................................................................................................................................................................................................................................................................................GTGTTTGGAATGATGC......................................................................................................................................................................1650.200.20-------0.20---------------------------------------------------------------------------------------
...............AGAAAGGAGAATCAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1780.120.12---------------------------------------------------------------------------------------------0.12-
..............................................................................................................................................................TTTTTTTTCGGCTTG..............................................................................................................................................................................................................................................................................................................................1590.110.110.11----------------------------------------------------------------------------------------------
..............................................................................................................................................................TTTTTTTTCGGCTTGACCC..........................................................................................................................................................................................................................................................................................................................1990.110.110.11----------------------------------------------------------------------------------------------

Antisense strand
TGACTTTTCCTTTACAGAAAGGAGAATCAGTTAAGAAGATGCGCGAGGAGGTAAGTTATGAAAGACTGAGATTGTTAACTTTGGGAAGTAAAAAACCTTTAAAACAAGTGAAAATTCTTTTTCAGAAATTAGGAAGGTCTCAATAAGGGAAATATGTATTTTTTTTCGGCTTGGTTATTTGTAGTGATAATCTGGGGAGTGTATTTTTTTTTTCCCCTTTTTGGGAAGTGTGGTTTTGACAAGTCAGAATTCTTTCAAGACTTAAGGCAGCTGCTGTAGGCTATCTTTGAGGATAGTCATGGAGCAGTAGTGTTTGGAATGATGCTGACTTTGCTTTGCATCAGGATCATGTACATTGGCAGTCTTATAAGGGACTGTAGATCCTGTACATACTCAGATCTTCTTTGTTTTAACTTCTTTTGGATCTTGTTTCCTATCTAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTCCTGAGAGAATTAT
..................................................................................................................................................................................................................((((((......))))))...((((((((.(((........)))))))))))...(((....)))........................................................................................................................................................................................................................
......................................................................................................................................................................................................199............................................................................278...................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189782SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037936(GSM510474)
293cand1. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR040008(GSM532893)
G727N. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		TAX577746(Rovira)
total RNA. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577741(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR040043(GSM532928)
G428T. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR029128(GSM416757)
H520. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189784
.................AAAGGAGAATCAGTTATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 183.000.00-----3.00-----------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................GGACTGTAGATCCTGGACG..................................................................................................... 192.000.00------2.00----------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................GGACTGTAGATCCTGGATC..................................................................................................... 191.000.00------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................AAGGGACTGTAGATCTCC......................................................................................................... 181.000.00--------------------------------1.00--------------------------------------------------------------
................................................................................................................................................................................................TGGGGAGTGTATTTTTTTACA...................................................................................................................................................................................................................................................................................... 211.000.00----1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................GGACTGTAGATCCTGGGAC..................................................................................................... 191.000.00------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................................TGGGGAGTGTATTTTTCCA........................................................................................................................................................................................................................................................................................ 191.000.00--------------------1.00--------------------------------------------------------------------------
..................AAGGAGAATCAGTTAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-----1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................................................................GGGAGTGTATTTTTTTAACA..................................................................................................................................................................................................................................................................................... 201.000.00----1.00------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TATTTTTTTTTTCCCCTTTTTGG........................................................................................................................................................................................................................................................................... 231.000.00----1.00------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGGGGAGTGTATTTTTCAAA....................................................................................................................................................................................................................................................................................... 201.000.00----1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CACTTCCCAAAAAGGG..................................................................................................................................................................................................................................................................... 1630.330.33-----------0.33-----------------------------------------------------------------------------------
.......................................................................................................................................................................................................AGGGGAAAAAAAAAATACA................................................................................................................................................................................................................................................................................. 1960.170.17--------------------------------------------------------------------------------------------0.17--