ID: uc010rnn.1_intron_7_0_chr11_64537082_r
GENE: (5)
chr11:64537032-64537485-


(16)
B-CELL 		(3)
BRAIN 		(5)
BREAST 		(22)
CELL-LINE 		(2)
CERVIX 		(3)
FIBROBLAST 		(4)
HEART 		(1)
HELA 		(4)
LIVER 		(1)
OTHER 		(20)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
CAAGATGAGTACCCAGAAATCAACTTTGTGGGGCTGCTCATCGGGCCCAGGTGAGTAACTGCTGGTCTATAGGATATAGAATTCCTTTAGAGCCTGTGAGATGTGTCCGTTTTGTGCCTAATTGGGGACTGTTGGCTTACTTTTCCCCTTTTTGGTAGGACATTTCATTTTGGCTGAATTAATGCCTTTCTGTGAGAAGGTGTCTTAACTTCCCCACTAGTGCGGAGAAGTCAAATCCTCAGGTTTACTGTGGCTGACCATAATATAGAGTTCATGGAGCTCTTGGTGGGAAAATCCAATTCTCTGCGCTTGTGGTTTCCCACCAATGCCAAATTGGTCCAGCCTCTCTTCCCTCTTGAGTGTGAATTTGTCAGGTATAAACTTAGTCATTTCTGCCTCTCTAGAGGGAACACCCTGAAGAACATAGAGAAGGAGTGCAATGCCAAGATTATGA
..................................................(((((((((.((.((((((.((((........)))).)))).)).))................((.(((....))).)).)))).)))))..........................................................................................................................................................................................................................................................................................................................
..................................................51..................................................................................................151.............................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR040039(GSM532924)
G531T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577745(Rovira)
total RNA. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR040036(GSM532921)
G243N. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR343337SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
....................CAACTTTGTGGGGCTGCTCATCGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2517.007.00--6.00----------------1.00-----------------------------------------------------------------
...................TCAACTTTGTGGGGCTGCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................2017.007.00----7.00--------------------------------------------------------------------------------
................................................................................................................................CTGTTGGCTTACTTTT......................................................................................................................................................................................................................................................................................................................1654.804.80------------------------------------------------------0.200.80--0.400.600.60------0.400.40--0.200.20-0.200.200.200.20-0.20-----
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAAGAACATAGAGAAGGAGTG.................2613.003.00---3.00---------------------------------------------------------------------------------
................................................................................................................................CTGTTGGCTTACTTTATTT...................................................................................................................................................................................................................................................................................................................193.000.002.00-------------------1.00----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAAGAACATAGAGAAGGAGT..................2513.003.00---3.00---------------------------------------------------------------------------------
...............................GGCTGCTCATCGGGCCCAGA...................................................................................................................................................................................................................................................................................................................................................................................................................2013.002.00--------3.00----------------------------------------------------------------------------
.....................AACTTTGTGGGGCTGCTCATCGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2413.003.00----------3.00--------------------------------------------------------------------------
......................ACTTTGTGGGGCTGCTCATC............................................................................................................................................................................................................................................................................................................................................................................................................................2013.003.00-----3.00-------------------------------------------------------------------------------
...............................................................................................................................ACTGTTGGCTTACTTTTA.....................................................................................................................................................................................................................................................................................................................1822.501.000.50------------------------------------------------------------0.500.50-0.50-0.50------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGGGAACACCCTGAAGAACATAG...........................2612.002.00-----------------2.00-------------------------------------------------------------------
..................................................GTGAGTAACTGCTGGTCTATAGGA............................................................................................................................................................................................................................................................................................................................................................................................2412.002.00--------------------------1.00--------------1.00-------------------------------------------
................................................................................................................................CTGTTGGCTTACTTTTTT....................................................................................................................................................................................................................................................................................................................1852.004.800.20-----------0.20-------0.40-----------------------------------0.60-------------0.20--0.20----0.20------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACATAGAGAAGGAGTGCAATG............2112.002.00-----------2.00-------------------------------------------------------------------------
..................................................................................................................TGCCTAATTGGGGACTGTTGGC..............................................................................................................................................................................................................................................................................................................................2212.002.00---------------2.00---------------------------------------------------------------------
................................................................................................................................CTGTTGGCTTACTTTTCT....................................................................................................................................................................................................................................................................................................................182.000.002.00------------------------------------------------------------------------------------
...............................GGCTGCTCATCGGGCCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00------------2.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAACATAGAGAAGGAGTGCA...............2512.002.00-1.00-------------------------------------------1.00---------------------------------------
........................................................................................................................................................................................................................................................................................................CAATTCTCTGCGCTTGTGGT..........................................................................................................................................2012.002.00--------------2.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAACATAGAGAAGGAGTGCAAT.............2612.002.00------------------2.00------------------------------------------------------------------
...................................................................................CCTTTAGAGCCTGTGAGATG...............................................................................................................................................................................................................................................................................................................................................................2012.002.00----------------2.00--------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGAACATAGAGAAGGAGTGCA...............2711.001.00----------------------------------------------1.00--------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACATAGAGAAGGAG...................1911.001.00--------------------------------------------1.00----------------------------------------
.....................AACTTTGTGGGGCTGCTCATCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----1.00-------------------------------------------------------------------------------
.....................................................................................................................CTAATTGGGGACTGTTGG...............................................................................................................................................................................................................................................................................................................................1811.001.00--1.00----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................GTCCAGCCTCTCTTCACTG...................................................................................................191.000.00----------------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAAGGAGTGCAATGCCAAGA......2411.001.00---1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACATAGAGAAGGAGTGCAA..............2311.001.00-1.00-----------------------------------------------------------------------------------
...............................................................................AATTCCTTTAGAGCCTGTGAGATGTGTC...........................................................................................................................................................................................................................................................................................................................................................2811.001.00------1.00------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAACATAGAGAAGGA....................2011.001.00---------------------1.00---------------------------------------------------------------
......................ACTTTGTGGGGCTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------1.00-----------------------------------
.....................................................................................TTTAGAGCCTGTGAGATGTGTC...........................................................................................................................................................................................................................................................................................................................................................2211.001.00-1.00-----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACATAGAGAAGGAGTGCAATGCCAA........3011.001.00----------------------------------------1.00--------------------------------------------
............................................................................TAGAATTCCTTTAGAGCCTGTGAGATG...............................................................................................................................................................................................................................................................................................................................................................2711.001.00------------------------------------------------1.00------------------------------------
..........................TGTGGGGCTGCTCATCGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------1.00--------------------------------
...........................................................................................................................................................................................................................................................................GAGTTCATGGAGCTCTTGGTGGGAA..................................................................................................................................................................2511.001.00---1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................TCATGGAGCTCTTGGTGGG....................................................................................................................................................................1911.001.00-------------1.00-----------------------------------------------------------------------
..................................................GTGAGTAACTGCTGGTC...................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00--------------------------------------------------1.00----------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGAACATAGAGAAGG.....................2111.001.00-1.00-----------------------------------------------------------------------------------
..............AGAAATCAACTTTGTGGGGCTGCTCATCGGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................3311.001.00-----1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAGAACATAGAGAAGGAGTGCAATGCC..........3111.001.00-------------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAAGGAGTGCAATGCCA.........2111.001.00------1.00------------------------------------------------------------------------------
......................ACTTTGTGGGGCTGCTCATCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------------------------1.00-------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAGAACATAGAGAAGGAGTGCAATGCCA.........3211.001.00----------------------------------1.00--------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................TTAGTCATTTCTGCCTCTCTAA..................................................221.000.00-------1.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCAATGCCAAGATTAT..1911.001.00---------1.00---------------------------------------------------------------------------
...............................................................................................................................ACTGTTGGCTTACTTTT......................................................................................................................................................................................................................................................................................................................1721.001.00------------------------------------------------------0.50----------0.50-------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAACATAGAGAAGGAGTGCAATG............2711.001.00-1.00-----------------------------------------------------------------------------------
...................................................................................CCTTTAGAGCCTGTGAGATGTGTC...........................................................................................................................................................................................................................................................................................................................................................2411.001.00-1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACACCCTGAAGAACATAGAGAAG......................2311.001.00--1.00----------------------------------------------------------------------------------
.........................TTGTGGGGCTGCTCATCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------------------1.00-----------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACACCCTGAAGAACATAG...........................1811.001.00-------------------------------------------1.00-----------------------------------------
................................................................................................................................CTGTTGGCTTACTTTAAA....................................................................................................................................................................................................................................................................................................................181.000.001.00------------------------------------------------------------------------------------
.....................................................................................................................CTAATTGGGGACTGTTGGCTTA...........................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------1.00-------------------------------------------------
..................................TGCTCATCGGGCCCAGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................191.000.001.00------------------------------------------------------------------------------------
..................ATCAACTTTGTGGGGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------1.00--------------------------------------------------------------
................AAATCAACTTTGTGGGGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------1.00---------------------------------------------------------------------------
..................................................GTGAGTAACTGCTGGTCTATAGG.............................................................................................................................................................................................................................................................................................................................................................................................2311.001.00--1.00----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACATAGAGAAGGAGTGCA...............2311.001.00-1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAACACCCTGAAGAACA..............................2011.001.00-------1.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................GTATAAACTTAGTCATTTCTGCC.........................................................2311.001.00-----------------------------1.00-------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAACATAGAGAAGGAGTGC................2411.001.00-1.00-----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGAGTGCAATGGGT.........181.000.00---------------------------1.00---------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGTGCAATGCCAAGTTA....201.000.00------------------------------------------1.00------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAACACCCTGAAGAACATAGAGAAGGA....................3011.001.00---------1.00---------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGAACATAGAGAAGGAGTGCAA..............2811.001.00------------------------1.00------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAAGGAGTGCAATGCC..........2011.001.00-1.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAACATAGAGAAGGAG...................2011.001.00------1.00------------------------------------------------------------------------------
.......................................................TAACTGCTGGTCTATTG..............................................................................................................................................................................................................................................................................................................................................................................................171.000.00------------------------------------1.00------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TAAACTTAGTCATTTCTGCCTCT......................................................2311.001.00-------------1.00-----------------------------------------------------------------------
................................................................................................................................CTGTTGGCTTACTTTGAA....................................................................................................................................................................................................................................................................................................................181.000.001.00------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACATAGAGAAGGAGTGCAATGTA..........2311.002.00-------------------1.00-----------------------------------------------------------------
.....................................................................................TTTAGAGCCTGTGAGATG...............................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------1.00-------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAGGAGTGCAATGCCA.........2011.001.00---------------------------------1.00---------------------------------------------------
......................ACTTTGTGGGGCTGCTCATCGGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-----1.00-------------------------------------------------------------------------------
....................................................................................CTTTAGAGCCTGTGAGATGTG.............................................................................................................................................................................................................................................................................................................................................................2111.001.00------1.00------------------------------------------------------------------------------
...............................................................................AATTCCTTTAGAGCCTG......................................................................................................................................................................................................................................................................................................................................................................1711.001.00---------------------------------------------------1.00---------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACATAGAGAAGGAGTGCAATG............2611.001.00------1.00------------------------------------------------------------------------------
.....................................................................TAGGATATAGAATTCTG................................................................................................................................................................................................................................................................................................................................................................................171.000.00-------1.00-----------------------------------------------------------------------------
..............................................................................................................................GACTGTTGGCTTACTTTTCCCCTTT...............................................................................................................................................................................................................................................................................................................2511.001.00-1.00-----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAAGAACATAGA..........................1730.670.67---------------------------------------------------------0.67---------------------------
................................................................................................................................CTGTTGGCTTACTTTTATA...................................................................................................................................................................................................................................................................................................................1950.604.800.40-------------------------------------------------------0.20----------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGAACATAGAGAA.......................1920.500.50---------------------------------------------------------------0.50---------------------
...............................................................................................................................ACTGTTGGCTTACTTTTATTT..................................................................................................................................................................................................................................................................................................................2120.501.000.50------------------------------------------------------------------------------------
...............................................................................................................................ACTGTTGGCTTACTTTTT.....................................................................................................................................................................................................................................................................................................................1820.501.000.50------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................AACATAGAGAAGGAGTG.................1720.500.50-----------0.50-------------------------------------------------------------------------
...............................................................................................................................ACTGTTGGCTTACTTTTTT....................................................................................................................................................................................................................................................................................................................1920.501.000.50------------------------------------------------------------------------------------
...............................................................................................................................ACTGTTGGCTTACTTTTAT....................................................................................................................................................................................................................................................................................................................1920.501.000.50------------------------------------------------------------------------------------
................................................................................................................................CTGTTGGCTTACTTTTTA....................................................................................................................................................................................................................................................................................................................1850.404.80--------------------0.200.20---------------------------------------------------------------
...............................................................................................................................ACTGTTGGCTTACTTT.......................................................................................................................................................................................................................................................................................................................1650.400.40----------------------------------------------------------0.20---------------------0.20----
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACATAGAGAAGGAGTG.................1640.250.25---------------------------------------------------------------------0.25---------------
................................................................................................................................CTGTTGGCTTACTTTTTATT..................................................................................................................................................................................................................................................................................................................2050.204.800.20------------------------------------------------------------------------------------
...............................................................................................................................ACTGTTGGCTTACTTTAA.....................................................................................................................................................................................................................................................................................................................1850.200.400.20------------------------------------------------------------------------------------
................................................................................................................................CTGTTGGCTTACTTTTATAT..................................................................................................................................................................................................................................................................................................................2050.204.80---------------------0.20---------------------------------------------------------------
...............................................................................................................................ACTGTTGGCTTACTTTAAA....................................................................................................................................................................................................................................................................................................................1950.200.400.20------------------------------------------------------------------------------------
................................................................................................................................CTGTTGGCTTACTTTTG.....................................................................................................................................................................................................................................................................................................................1750.204.80------------------------------------------------------0.20------------------------------
................................................................................................................................CTGTTGGCTTACTTTTTCT...................................................................................................................................................................................................................................................................................................................1950.204.80----------------------0.20--------------------------------------------------------------
............................................................................................................................................................................................TCTGTGAGAAGGTGT...........................................................................................................................................................................................................................................................1590.110.11-----------------------------------------------------------------------------------0.11-

Antisense strand
CAAGATGAGTACCCAGAAATCAACTTTGTGGGGCTGCTCATCGGGCCCAGGTGAGTAACTGCTGGTCTATAGGATATAGAATTCCTTTAGAGCCTGTGAGATGTGTCCGTTTTGTGCCTAATTGGGGACTGTTGGCTTACTTTTCCCCTTTTTGGTAGGACATTTCATTTTGGCTGAATTAATGCCTTTCTGTGAGAAGGTGTCTTAACTTCCCCACTAGTGCGGAGAAGTCAAATCCTCAGGTTTACTGTGGCTGACCATAATATAGAGTTCATGGAGCTCTTGGTGGGAAAATCCAATTCTCTGCGCTTGTGGTTTCCCACCAATGCCAAATTGGTCCAGCCTCTCTTCCCTCTTGAGTGTGAATTTGTCAGGTATAAACTTAGTCATTTCTGCCTCTCTAGAGGGAACACCCTGAAGAACATAGAGAAGGAGTGCAATGCCAAGATTATGA
..................................................(((((((((.((.((((((.((((........)))).)))).)).))................((.(((....))).)).)))).)))))..........................................................................................................................................................................................................................................................................................................................
..................................................51..................................................................................................151.............................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR040039(GSM532924)
G531T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577745(Rovira)
total RNA. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR040036(GSM532921)
G243N. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR343337SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................................................................................................................................................................................................................................GTTTCCCACCAATGCACCA......................................................................................................................... 192.000.00------------------------------1.00-1.00----------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................CCAGCCTCTCTTCCCTGGG................................................................................................. 191.000.00-------------------------------------1.00-----------------------------------------------
..........................................................................................................................................................................................................................................................................AGAGTTCATGGAGCTCTTG......................................................................................................................................................................... 191.000.00-------1.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TCCAGCCTCTCTTCCCTCTGT................................................................................................ 211.000.00-----------------------------------------------1.00-------------------------------------
.........................................................................................................................................TACTTTTCCCCTTTTGATG.......................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------------------1.00----------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................CAAGAGGGAAGAGAGGC................................................................................................ 1711.001.00---------------------------------------1.00---------------------------------------------
......................................................................................................................................................................................................................................AAACCTGAGGATTTGA................................................................................................................................................................................................................ 1660.170.17---------------------------------------------------------------------------------0.17---
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCTCTATGTTCTT..................... 1680.120.12----------------------------------------------------------------------------------0.12--
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATGTTCTTCAGGGT............................ 1590.110.11------------------------------------------------------------------------------------0.11
.........................................................................................ACATCTCACAGGCTC.............................................................................................................................................................................................................................................................................................................................................................. 1590.110.11-----------------------0.11-------------------------------------------------------------