ID: uc010ows.1_intron_12_0_chr1_114968346_r.3p
GENE: (6)
chr1:114968296-114968545-


(1)
AGO3.ip 		(1)
BRAIN 		(2)
BREAST 		(7)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(2)
LIVER 		(1)
OTHER 		(5)
SKIN

Sense strand
AAACGTCATTTATTCAGCTTTGGAATGTATTAAGTTTCTGATCATCATCATCATCTTTAAACTGACTCCATTCCCTGCTGTACTGTTGGAGCTTTGAGGTGCTGATAGTTGTCAGAGGAAAGAGGAAAACATGGTGATTACTCAACAAAGTAGATGATTTAGTTGATTATATGCAAATTCTCATTTTTTAAATTTTTCAGGTAATCTAGTAATAGAGAGTAAACCAGCTCCTGGTTATACTCCTAATGTT
.....................................................................................................(((((....)))))......(((................)))...........................................................................................................
.....................................................................................................102..........................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189785SRR343334SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
.............................................................................................................................................TCAACAAAGTAGATGGTG...........................................................................................181892.000.001451.00227.00202.0012.00---------------------
.............................................................................................................................................TCAACAAAGTAGATGGTGT..........................................................................................1981.000.0061.0012.005.003.00---------------------
.............................................................................................................................................TCAACAAAGTAGATGGTGA..........................................................................................1918.000.0016.002.00-----------------------
.............................................................................................................................................TCAACAAAGTAGATGGTA...........................................................................................1814.000.007.001.004.002.00---------------------
.............................................................................................................................................TCAACAAAGTAGATGGGG...........................................................................................187.000.004.003.00-----------------------
..............................................................................................................................................................................................................................ACCAGCTCCTGGTTATACTCCTAA....2416.006.00----6.00--------------------
........................................ATCATCATCATCATCT..................................................................................................................................................................................................1604.004.00-----4.00-------------------
.............................................................................................................................................TCAACAAAGTAGATGGTAT..........................................................................................192.000.001.00--1.00---------------------
.............................................................................................................................................TCAACAAAGTAGATGATG...........................................................................................182.000.00--2.00----------------------
..........................................................................................................AGTTGTCAGAGGAAACTGC.............................................................................................................................192.000.00--------1.00--------1.00-------
.....................................................................................TTGGAGCTTTGAGGTGCTGATAGTTGTCAG.......................................................................................................................................3012.002.00------2.00------------------
........................................................................................................................................................................ATATGCAAATTCTCATTTTTTAA...........................................................2311.001.00-----------1.00-------------
.......................................................................................................................................GATTACTCAACAAAGTAGATGATTTAGTTG.....................................................................................3011.001.00----------------1.00--------
...............................................................................................GAGGTGCTGATAGTTGA..........................................................................................................................................171.000.00---------------1.00---------
..................................................................................................................................................AAAGTAGATGATTTATATT.....................................................................................191.000.00-------1.00-----------------
............................................................................................................................................CTCAACAAAGTAGATGGTG...........................................................................................191.000.001.00------------------------
.............................................................................................................................................TCAACAAAGTAGATGGCG...........................................................................................181.000.00-1.00-----------------------
.......................................................................TCCCTGCTGTACTGTTGGAGCTTTGAGGT......................................................................................................................................................2911.001.00--------------1.00----------
..........................................................................................................................AGGAAAACATGGTGATTACTCAA.........................................................................................................2311.001.00---------------------1.00---
......................................................................TTCCCTGCTGTACTGTTGA.................................................................................................................................................................191.000.00------------------1.00------
....................................................................CATTCCCTGCTGTACTGTTGGAGCTTTG..........................................................................................................................................................2811.001.00-------------------1.00-----
..........................................................................CTGCTGTACTGTTGGAGCTTTGAGGTGCTCTG................................................................................................................................................321.000.00------------1.00------------
...............................................................................GTACTGTTGGAGCTTTGAGGTGC....................................................................................................................................................2311.001.00----------1.00--------------
......................................................................TTCCCTGCTGTACTGTTGGAGC..............................................................................................................................................................2211.001.00------1.00------------------
.............................................................................................................................AAAACATGGTGATTATTG...........................................................................................................181.000.00----------------------1.00--
.............................................................................................................................................TCAACAAAGTAGATGATGTAT........................................................................................211.000.00---1.00---------------------
.........................................................................................................................................................................TATGCAAATTCTCATTTTTT.............................................................2011.001.00--------------------1.00----
.............................................................................................................................................TCAACAAAGTAGATGGTTT..........................................................................................191.000.001.00------------------------
.....................................................................................................CTGATAGTTGTCAGAGGAAAGAGGAAAAC........................................................................................................................2911.001.00------1.00------------------
.............................................................................................................................................TCAACAAAGTAGATGGAG...........................................................................................181.000.001.00------------------------
.............................................................................................................................................TCAACAAAGTAGATGTGTA..........................................................................................191.000.001.00------------------------
......................................................................................TGGAGCTTTGAGGTGC....................................................................................................................................................1620.500.50-----------------------0.50-
.......................................................................................................GATAGTTGTCAGAGGA...................................................................................................................................1640.250.25------------------------0.25

Antisense strand
AAACGTCATTTATTCAGCTTTGGAATGTATTAAGTTTCTGATCATCATCATCATCTTTAAACTGACTCCATTCCCTGCTGTACTGTTGGAGCTTTGAGGTGCTGATAGTTGTCAGAGGAAAGAGGAAAACATGGTGATTACTCAACAAAGTAGATGATTTAGTTGATTATATGCAAATTCTCATTTTTTAAATTTTTCAGGTAATCTAGTAATAGAGAGTAAACCAGCTCCTGGTTATACTCCTAATGTT
.....................................................................................................(((((....)))))......(((................)))...........................................................................................................
.....................................................................................................102..........................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189785SRR343334SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
............................................................................................TTTGAGGTGCTGATACTCG........................................................................................................................................... 191.000.00-------------1.00-----------
..............CAGCTTTGGAATGTATCAG......................................................................................................................................................................................................................... 191.000.00---------1.00---------------
......................................................................................................................................................................................................AGGTAATCTAGTAATTT................................... 171.000.00-------1.00-----------------
......................................................................................................................................................................................................AGGTAATCTAGTAATAGAT................................. 191.000.00-------1.00-----------------