ID: uc010kjl.2_intron_1_0_chr6_157488320_f.3p
GENE: (2)
chr6:157494942-157495191+


(6)
B-CELL
(1)
BRAIN
(6)
BREAST
(11)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(1)
LIVER
(4)
OTHER
(6)
SKIN
(1)
UTERUS

Sense strand
GATAAAAAAGGATTTTGCCAGAATGCGGTGCTGTTTGCATTTCAGAAATTAATATGCTCCCCATTACAATTTCTTTTTTCTTTTCTTCCTTCAAGGGAAATGCAAGGGCCTCCTGCTTCACTCTGTAACTTGTGTTGGCAGGAGTACAGTCTGACGAATCACACATATAATCCTAAACTCTTTCTCCTGTTTTCGATTAGCATCTGTGGGTCTTGCAGATATGATGTCTCCTGGTGAATCCAAACTGCCC
......................................................................(((............(((((....)))))......((((((((((((.(((..........)))..))))))))....))))...)))............................................................................................
..............................................................63..................................................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR189784SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR189782SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR040016(GSM532901)
G645N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532874(GSM532874)
G699T. (cervix)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................................................GAGTACAGTCTGACGATC...........................................................................................1848.000.0018.0019.00-1.002.002.00------2.00----1.001.00-----------1.00-1.00-------
..............................................................................................................................................AGTACAGTCTGACGATC...........................................................................................1719.000.009.003.00--2.00-----3.00----------------1.00-------1.00----
................................................................................................................................................TACAGTCTGACGAATC..........................................................................................1616.006.00---5.00-----------1.00------------------------
......................................................................................................................................................................................................................GCAGATATGATGTCTCCTGG................2013.003.00-----3.00----------------------------------
.............................................................................................................................................GAGTACAGTCTGACGATA...........................................................................................183.000.001.002.00--------------------------------------
........AGGATTTTGCCAGAATGC................................................................................................................................................................................................................................1812.002.00---------------------------------1.00--1.00---
...................................................................AATTTCTTTTTTCTTTTCG....................................................................................................................................................................192.000.00--2.00-------------------------------------
.................................................................ACAATTTCTTTTTTCTTTTTTTG..................................................................................................................................................................232.000.00--2.00-------------------------------------
.............................................................................................................................................GAGTACAGTCTGACGAT............................................................................................172.000.00----1.00----------------1.00------------------
........................................................................................................................................................................................TCCTGTTTTCGATTAGCATCTGTGGGTC......................................2811.001.00----------------------------1.00-----------
............................................................................TTTCTTTTCTTCCTTCAAC...........................................................................................................................................................191.000.00------1.00---------------------------------
..................................................................CAATTTCTTTTTTCTTTTCTGAG.................................................................................................................................................................231.000.00-------------------------------1.00--------
.........................................................................................................................................................................................................ATCTGTGGGTCTTGCGT................................171.000.00--1.00-------------------------------------
....................................................................................................................TTCACTCTGTAACTTGTGTTGGC...............................................................................................................2311.001.00--------------------1.00-------------------
.................................................................ACAATTTCTTTTTTCTTAAT.....................................................................................................................................................................201.000.00------1.00---------------------------------
.......................................................................................................................................................................................CTCCTGTTTTCGATTAG..................................................1711.001.00----------------------------------1.00-----
...................................................................AATTTCTTTTTTCTTTTATAT..................................................................................................................................................................211.000.00------1.00---------------------------------
.....................................................................TTTCTTTTTTCTTTTCGGTC.................................................................................................................................................................201.000.00--------1.00-------------------------------
.......................................................................TCTTTTTTCTTTTCTTCCAT...............................................................................................................................................................201.000.00--1.00-------------------------------------
..................................................................................................................................................................................................................................TCTCCTGGTGAATCCAAACT....2011.001.00----------------------1.00-----------------
.......................................................................TCTTTTTTCTTTTCTTCCTTCAAG...........................................................................................................................................................2411.001.00--1.00-------------------------------------
..................................................................CAATTTCTTTTTTCTAAG......................................................................................................................................................................181.000.00----------------1.00-----------------------
.................................................................ACAATTTCTTTTTTCTTTTTTTA..................................................................................................................................................................231.000.00----------------1.00-----------------------
...............................................................................................................................................................................................................................ATGTCTCCTGGTGAATCCATG......211.000.00-----------------------1.00----------------
..................................................................................................................................................CAGTCTGACGAATCACACATATAAT...............................................................................2511.001.00-----------------------------1.00----------
.............................................................................................................................................GAGTACAGTCTGACGAGC...........................................................................................181.000.00----1.00-----------------------------------
................................................................................................................................................................................................TCGATTAGCATCTGTAGTA.......................................191.000.00-------------1.00--------------------------
.....................................................................................................................................GTTGGCAGGAGTACATGT...................................................................................................181.000.00-------------1.00--------------------------
.........................................................................TTTTTTCTTTTCTTCCTTCAGC...........................................................................................................................................................221.000.00--------1.00-------------------------------
.........................................................................................................................................................................................................ATCTGTGGGTCTTGCAGAT..............................1911.001.00-------------------------1.00--------------
............................................................................................................................................GGAGTACAGTCTGACGAT............................................................................................181.000.00--------------------------1.00-------------
................................................................................................................................................TACAGTCTGACGAATA..........................................................................................161.000.00---------------1.00------------------------
..................................................................CAATTTCTTTTTTCTTTACG....................................................................................................................................................................201.000.00-------------------1.00--------------------
..........................................................................TTTTTCTTTTCTTCCTTCTGAG..........................................................................................................................................................221.000.00--------1.00-------------------------------
......................................................................TTCTTTTTTCTTTTCTTCACCC..............................................................................................................................................................221.000.00------1.00---------------------------------
....................................................................ATTTCTTTTTTCTTTTCTTCC.................................................................................................................................................................2170.430.43--------------------------------------0.43-
.........................................................................................................GGGCCTCCTGCTTCAC.................................................................................................................................1660.170.17---------------------------------------0.17

Antisense strand
GATAAAAAAGGATTTTGCCAGAATGCGGTGCTGTTTGCATTTCAGAAATTAATATGCTCCCCATTACAATTTCTTTTTTCTTTTCTTCCTTCAAGGGAAATGCAAGGGCCTCCTGCTTCACTCTGTAACTTGTGTTGGCAGGAGTACAGTCTGACGAATCACACATATAATCCTAAACTCTTTCTCCTGTTTTCGATTAGCATCTGTGGGTCTTGCAGATATGATGTCTCCTGGTGAATCCAAACTGCCC
......................................................................(((............(((((....)))))......((((((((((((.(((..........)))..))))))))....))))...)))............................................................................................
..............................................................63..................................................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR189784SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR189782SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR040016(GSM532901)
G645N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532874(GSM532874)
G699T. (cervix)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................................................................................................................................TTGCAGATATGATGTTAAA................... 195.000.00-------1.00-2.00-2.00----------------------------
....................................................................................................................................................................................................................TTGCAGATATGATGTTAA.................... 183.000.00-------2.00-1.00------------------------------
...........................................................................................................CAGAGTGAAGCAGGAGGC............................................................................................................................. 1812.002.00--------------2.00-------------------------
..........................GGTGCTGTTTGCATTTAA.............................................................................................................................................................................................................. 181.000.00------------------------1.00---------------
......................................................................................................TGAAGCAGGAGGCCCTTG.................................................................................................................................. 1820.500.50-------------------------------------0.50--