ID: uc010fhm.2_intron_29_0_chr2_90260251_f.3p
GENE: (30)
chr2:90458415-90458664+


(5)
B-CELL
(1)
BRAIN
(3)
BREAST
(4)
CELL-LINE
(3)
CERVIX
(5)
LIVER
(1)
OTHER
(4)
SKIN
(1)
TESTES

Sense strand
CTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATAATTTAAATTGGTATCAGCAGAAACCAGGGAAAACTCCTAAGCTCCTGATCTATGCTGCATCCAGTCTGCAAAGTGGGATTCCCTCTCGGTTCAGTGACAGTGGATCTGGGGCAGATTACACTCTCACCATCCGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGAGTGACAGTA
........................................................................................................(((((.(((((..(((((((.....(((...((.(((...))).)))))....))).))))))))).)))))..........................................................................
....................................................................................................101..................................................................................186..............................................................
SizePerfect hitTotal NormPerfect NormSRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040025(GSM532910)
G613T. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189784GSM532874(GSM532874)
G699T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR189787SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040020(GSM532905)
G699N_2. (cervix)
TAX577743(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
...................................................................................................................................................................GTGGATCTGGGGCAGAATT....................................................................1930.000.0028.001.00---------1.00-----------------
..................................................................................................................................................................AGTGGATCTGGGGCAGAATT....................................................................2018.000.0016.001.00---------1.00-----------------
..................................................................................................................................................................AGTGGATCTGGGGCAGAA......................................................................1814.000.0014.00----------------------------
...................................................................................................................................................................GTGGATCTGGGGCAGAAT.....................................................................187.000.007.00----------------------------
............................................................................................................................................................................................................CAGCCTGAAGATTTTGCT............................184.000.00----1.00-3.00----------------------
........ATCTGTAGGAGACAGAGTA...............................................................................................................................................................................................................................193.000.002.00--1.00-------------------------
...................................................................................................................................................................GTGGATCTGGGGCAGATA.....................................................................183.000.003.00----------------------------
.................................................................................................................................................................CAGTGGATCTGGGGCAGAA......................................................................193.000.003.00----------------------------
......................................................................................................................................................................................................AGCCTGCAGCCTGAAGATTTTGCAACTTT.......................293.000.00---3.00-------------------------
........ATCTGTAGGAGACAGAGACA..............................................................................................................................................................................................................................203.000.00-2.001.00--------------------------
....................................................................................................................................................................TGGATCTGGGGCAGAATTC...................................................................193.000.003.00----------------------------
...........TGTAGGAGACAGAGTCAGC............................................................................................................................................................................................................................193.000.00-----3.00-----------------------
...TCTGCATCTGTAGGAGACAGAGTT...............................................................................................................................................................................................................................242.000.00-1.001.00--------------------------
...........................................................................................................................................................................................................GCAGCCTGAAGATTTTTCA............................192.000.00--1.00------1.00-------------------
.............................................................................................................................................................................................................AGCCTGAAGATTTTGCACTTT........................212.000.00----2.00------------------------
.................................................................................................................................................................CAGTGGATCTGGGGCAGAATT....................................................................212.000.002.00----------------------------
.....................................GCCGGGCGAGTCAGGGCATTAA...............................................................................................................................................................................................222.000.00-1.00-1.00-------------------------
....................................................................................................................................................................................................GCAGCCTGCAGCCTGAAGATAA................................222.000.00---2.00-------------------------
...................................................................................................................................................................GTGGATCTGGGGCAGAATTA...................................................................202.000.002.00----------------------------
............GTAGGAGACAGAGTCATCAT..........................................................................................................................................................................................................................202.000.00-2.00---------------------------
.....................................GCCGGGCGAGTCAGGGCATCAG...............................................................................................................................................................................................222.000.00---2.00-------------------------
........ATCTGTAGGAGACAGACTC...............................................................................................................................................................................................................................192.000.00---2.00-------------------------
......................................................................................................................................................................................................AGCCTGCAGCCTGAAGATGC................................201.000.00-1.00---------------------------
..................................................................................................................................................................AGTGGATCTGGGGCAGAAT.....................................................................191.000.001.00----------------------------
........................................................................................................................................................................................................CCTGCAGCCTGAAGATTTTGGAA...........................231.000.00-1.00---------------------------
........ATCTGTAGGAGACAGAGTT...............................................................................................................................................................................................................................191.000.00-1.00---------------------------
...................................................................................................................................................................GTGGATCTGGGGCAGAATTC...................................................................201.000.001.00----------------------------
.......................................................................................................................................................................................................GCCTGCAGCCTGAAGACTTT...............................201.000.00----1.00------------------------
.........................................................................................................CTCCTGATCTATGCTGCACCC............................................................................................................................211.000.00--------1.00--------------------
........ATCTGTAGGAGACAGAGTCGC.............................................................................................................................................................................................................................211.000.00-1.00---------------------------
......GCATCTGTAGGAGACAGAGTT...............................................................................................................................................................................................................................211.000.00-1.00---------------------------
...........TGTAGGAGACAGAGTCACAA...........................................................................................................................................................................................................................201.000.00----1.00------------------------
.....................................................................................................................................................................GGATCTGGGGCAGATGGAG..................................................................191.000.00-------------------------1.00---
........ATCTGTAGGAGACAGAGTCACCATT.........................................................................................................................................................................................................................251.000.00--1.00--------------------------
........................................................................................................................................................................................................CCTGCAGCCTGAAGATTTTGCAACTTC.......................271.000.00--1.00--------------------------
......GCATCTGTAGGAGACAGAGTCT..............................................................................................................................................................................................................................221.000.00-1.00---------------------------
..........CTGTAGGAGACAGAGTCAGC............................................................................................................................................................................................................................201.000.00-----1.00-----------------------
........ATCTGTAGGAGACAGCGTC...............................................................................................................................................................................................................................191.000.00-1.00---------------------------
..........................................................................................................................................................................................................TGCAGCCTGAAGATTTTGCAACTG........................241.000.00-1.00---------------------------
....CTGCATCTGTAGGAGACAGCGTC...............................................................................................................................................................................................................................231.000.00--1.00--------------------------
.......CATCTGTAGGAGACAGAGTT...............................................................................................................................................................................................................................201.000.00--1.00--------------------------
.....TGCATCTGTAGGAGACAGAGTT...............................................................................................................................................................................................................................221.000.00---1.00-------------------------
.........TCTGTAGGAGACAGAGTCACCATT.........................................................................................................................................................................................................................241.000.00--1.00--------------------------
........ATCTGTAGGAGACAGAGTCACCAC..........................................................................................................................................................................................................................241.000.00--1.00--------------------------
...TCTGCATCTGTAGGAGACAGAGTA...............................................................................................................................................................................................................................241.000.00--1.00--------------------------
..GTCTGCATCTGTAGGAGACAGAAT................................................................................................................................................................................................................................241.000.00--1.00--------------------------
..GTCTGCATCTGTAGGAGACAGGG.................................................................................................................................................................................................................................231.000.00-1.00---------------------------
.........TCTGTAGGAGACAGAGTCACCCTCA........................................................................................................................................................................................................................251.000.00---1.00-------------------------
......GCATCTGTAGGAGACAGAGGC...............................................................................................................................................................................................................................211.000.00-1.00---------------------------
..GTCTGCATCTGTAGGAGAA.....................................................................................................................................................................................................................................191.000.00-1.00---------------------------
.....TGCATCTGTAGGAGACAGAGGC...............................................................................................................................................................................................................................221.000.00-1.00---------------------------
.........................................GGCGAGTCAGGGCATTGC...............................................................................................................................................................................................181.000.00--------------------1.00--------
......GCATCTGTAGGAGACAGCGTT...............................................................................................................................................................................................................................211.000.00--1.00--------------------------
..............AGGAGACAGAGTCACCATT.........................................................................................................................................................................................................................191.000.00--1.00--------------------------
.............................................................................................................................................................................................................AGCCTGAAGATTTTGGAAC..........................191.000.00---------1.00-------------------
............GTAGGAGACAGAGTCACGA...........................................................................................................................................................................................................................191.000.00-1.00---------------------------
.....TGCATCTGTAGGAGACAGAGGCA..............................................................................................................................................................................................................................231.000.00-1.00---------------------------
.....TGCATCTGTAGGAGACAGAGG................................................................................................................................................................................................................................211.000.00-1.00---------------------------
.......................................................................................................................................................................................................GCCTGCAGCCTGAAGATTTTGCAACA.........................261.000.00--1.00--------------------------
........ATCTGTAGGAGACAGAGTAT..............................................................................................................................................................................................................................201.000.00-1.00---------------------------
........ATCTGTAGGAGACAGAGTCACCAACA........................................................................................................................................................................................................................261.000.00-1.00---------------------------
.................................ACTTGCCGGGCGAGTCAGGGGATT.................................................................................................................................................................................................241.000.00-1.00---------------------------
...........TGTAGGAGACAGAGTCAGCA...........................................................................................................................................................................................................................201.000.00-1.00---------------------------
.......................................CGGGCGAGTCAGGGCATTAGCCATC..........................................................................................................................................................................................251.000.00--1.00--------------------------
..GTCTGCATCTGTAGGAGACAGAGTAAA.............................................................................................................................................................................................................................271.000.00--1.00--------------------------
......GCATCTGTAGGAGACAGAGTCACCATA.........................................................................................................................................................................................................................271.000.00-------1.00---------------------
................................................................................................................................................................................................................CTGAAGATTTTGCAACTTACTTC...................231.000.00------1.00----------------------
............GTAGGAGACAGAGTCACCATT.........................................................................................................................................................................................................................211.000.00--1.00--------------------------
....CTGCATCTGTAGGAGACAGAGTT...............................................................................................................................................................................................................................231.000.00---1.00-------------------------
.....................................GCCGGGCGAGTCAGGGCAA..................................................................................................................................................................................................191.000.00---1.00-------------------------
.....................................................................................................................................................................................................CAGCCTGCAGCCTGAAGATTTTTT.............................241.000.00-1.00---------------------------
..................................................................TTAAATTGGTATCAGCACA.....................................................................................................................................................................191.000.00------------------1.00----------
.................................................................................................CTCCTAAGCTCCTGATTTAC.....................................................................................................................................201.000.00---------------------1.00-------
........ATCTGTAGGAGACAGAGTCACCCTCA........................................................................................................................................................................................................................261.000.00--------------1.00--------------
........ATCTGTAGGAGACAGAGTCACCAA..........................................................................................................................................................................................................................241.000.00-1.00---------------------------
.......................................CGGGCGAGTCAGGGCATTAGCATT...........................................................................................................................................................................................241.000.00---------------1.00-------------
.....TGCATCTGTAGGAGACAGAGTCACCATA.........................................................................................................................................................................................................................281.000.00-------1.00---------------------
............GTAGGAGACAGAGTCATCA...........................................................................................................................................................................................................................191.000.00-1.00---------------------------
...........................................................................TATCAGCAGAAACCAGGGAAAGTC.......................................................................................................................................................241.000.00---1.00-------------------------
..GTCTGCATCTGTAGGAGACAGAGTCACCC...........................................................................................................................................................................................................................291.000.00--1.00--------------------------
......GCATCTGTAGGAGACAGAGTCAT.............................................................................................................................................................................................................................231.000.00-1.00---------------------------
...TCTGCATCTGTAGGAGACAAAAT................................................................................................................................................................................................................................231.000.00-------1.00---------------------
............GTAGGAGACAGAGTCACCATA.........................................................................................................................................................................................................................211.000.00-1.00---------------------------
....CTGCATCTGTAGGAGACAGCG.................................................................................................................................................................................................................................211.000.00--1.00--------------------------
.....................................GCCGGGCGAGTCAGGTTAG..................................................................................................................................................................................................191.000.00--------------------------1.00--
................................CACTTGCCGGGCGAGTCAGGTTT...................................................................................................................................................................................................231.000.00--1.00--------------------------
.............................................................................................................................................................................................................AGCCTGAAGATTTTGCAACG.........................201.000.00-----------------1.00-----------
.......................................CGGGCGAGTCAGGGCATTGT...............................................................................................................................................................................................201.000.00-1.00---------------------------
..GTCTGCATCTGTAGGAGACAGTTT................................................................................................................................................................................................................................241.000.00-1.00---------------------------
..........................................................................................................................................................................................................TGCAGCCTGAAGATTTTGCGACA.........................231.000.00-1.00---------------------------
..........CTGTAGGAGACAGAGTCAGCA...........................................................................................................................................................................................................................211.000.00-----1.00-----------------------
............GTAGGAGACAGAGTCACCCT..........................................................................................................................................................................................................................201.000.00-1.00---------------------------
......GCATCTGTAGGAGACAGAA.................................................................................................................................................................................................................................191.000.00------------------------1.00----
........ATCTGTAGGAGACAGAGTCATCA...........................................................................................................................................................................................................................231.000.00-1.00---------------------------
.....TGCATCTGTAGGAGACAGGGT................................................................................................................................................................................................................................211.000.00-------------1.00---------------
......GCATCTGTAGGAGACCG...................................................................................................................................................................................................................................171.000.00---1.00-------------------------
............GTAGGAGACAGAGTCAGCA...........................................................................................................................................................................................................................191.000.00-1.00---------------------------
........ATCTGTAGGAGACAGAGTCGCCA...........................................................................................................................................................................................................................231.000.00-1.00---------------------------
.......................................CGGGCGAGTCAGGGCATTACC..............................................................................................................................................................................................211.000.00-1.00---------------------------
...........................................................................................................................................................................................................GCAGCCTGAAGATTTTGCGACT.........................221.000.00----1.00------------------------
........ATCTGTAGGAGACAGAGTCAAA............................................................................................................................................................................................................................221.000.00-1.00---------------------------
...TCTGCATCTGTAGGAGACACA..................................................................................................................................................................................................................................211.000.00----1.00------------------------
......GCATCTGTAGGAGACAGCGCC...............................................................................................................................................................................................................................211.000.00---1.00-------------------------
..GTCTGCATCTGTAGGAGACAGAGTT...............................................................................................................................................................................................................................251.000.00-1.00---------------------------
...........................................................................................................................................................CAGTGACAGTGGATCTGGGGCAGAC......................................................................251.000.00------------1.00----------------
...........TGTAGGAGACAGAGTCATCA...........................................................................................................................................................................................................................201.000.00--1.00--------------------------
...................................................................TAAATTGGTATCAGCAGGTAT..................................................................................................................................................................211.000.00-------------------1.00---------
.....TGCATCTGTAGGAGACAGAGTCT..............................................................................................................................................................................................................................231.000.00-1.00---------------------------
....................................................................................................................................................................TGGATCTGGGGCAGAAAA....................................................................181.000.001.00----------------------------
.......CATCTGTAGGAGACAGGGT................................................................................................................................................................................................................................191.000.00--1.00--------------------------
..................................................................................................................................................................AGTGGATCTGGGGCAGAAAA....................................................................201.000.001.00----------------------------
.....................................................................................................................................................................................................CAGCCTGCAGCCTGAAGATTTTGCG............................251.000.00-1.00---------------------------
........ATCTGTAGGAGACAGAGTCATT............................................................................................................................................................................................................................221.000.00--1.00--------------------------
..............................................................................................................................................................................................................................ACTTATTACTGTCAAGAC..........181.000.00----------------------1.00------
...........................................CGAGTCAGGGCATTAAGAA............................................................................................................................................................................................191.000.00-1.00---------------------------
........ATCTGTAGGAGACAGAGTCACCATTA........................................................................................................................................................................................................................261.000.00-1.00---------------------------
......................................................................................................................................................................................................AGCCTGCAGCCTGAAGTT..................................181.000.00----------------1.00------------
............GTAGGAGACAGAGTCACGAT..........................................................................................................................................................................................................................201.000.00-1.00---------------------------
.......CATCTGTAGGAGACAGAGTTT..............................................................................................................................................................................................................................211.000.00--1.00--------------------------
......................................................................................................................................................................................................AGCCTGCAGCCTGAAGATGTAA..............................221.000.00--1.00--------------------------
.............................................................................TCAGCAGAAACCAGGGAAAACT.......................................................................................................................................................2260.170.17----------------------------0.17

Antisense strand
CTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATAATTTAAATTGGTATCAGCAGAAACCAGGGAAAACTCCTAAGCTCCTGATCTATGCTGCATCCAGTCTGCAAAGTGGGATTCCCTCTCGGTTCAGTGACAGTGGATCTGGGGCAGATTACACTCTCACCATCCGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGAGTGACAGTA
........................................................................................................(((((.(((((..(((((((.....(((...((.(((...))).)))))....))).))))))))).)))))..........................................................................
....................................................................................................101..................................................................................186..............................................................
SizePerfect hitTotal NormPerfect NormSRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040025(GSM532910)
G613T. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189784GSM532874(GSM532874)
G699T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR189787SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040020(GSM532905)
G699N_2. (cervix)
TAX577743(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
.................................................................................................................................................................................................TCCGCAGCCTGCAGCCTGAGGCA.................................. 232.000.00----------2.00------------------
...............................................................................AGCAGAAACCAGGGAAAACTAGC.................................................................................................................................................... 231.000.00-----------------------1.00-----
................................................................................................................TCTATGCTGCATCCAGGC........................................................................................................................ 181.000.00--------1.00--------------------
......................................................................................................................................ACTGTCACTGAACCGAGAGGGAATCCCACTT..................................................................................... 3190.330.33---------------------------0.33-
........................................................................................TAGATCAGGAGCTTAGGAGTTTTCCCTG...................................................................................................................................... 2870.140.14------------0.14----------------
................................................................................................................................................GATCCACTGTCACTGAACCGAGAGGG................................................................................ 2690.110.11------------0.11----------------
...................................................................................................................................TGAACCGAGAGGGAATCCCACTTTGC............................................................................................. 2690.110.11------------0.11----------------