ID: uc010ezu.2_intron_25_0_chr2_32690233_f.5p
GENE: (26)
chr2:32690183-32690432+


(2)
BRAIN
(1)
BREAST
(10)
CELL-LINE
(1)
CERVIX
(3)
HEART
(1)
LIVER
(1)
OTHER
(7)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
TCTTCAACCTCCGCCTCACCAGTCCATTATTATAGAGCGAATGCATTCAGGTAATCTTTTACTTTCTTAAATTTTTTTTTTTTTTTTTTTGCTTAGTCTGCCGGCCTTTTAAAGACTCATTATTCTTCAGTTCGATTTTTTTTTTTTTTTTTTTTGCAAATCGCGTTTCCTCTTGGGTTAAGTACATTTTATCAAGAATAAGCACTTACATGTTCAAGCTTTGTGCTCACCAAATTGCATAAAGAGTGCT
..............................................................................................(((((.............))))).....................................................................................................................................
.............................................................62.............................................................................141...........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR189784SRR189782SRR343336SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR189785TAX577741(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR343337
..................................................................TTAAATTTTTTTTTTTTTTTTTTTCAAG............................................................................................................................................................2817.000.001.009.003.003.00--1.00-------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTCAAG..............................................................................................................................................................2612.000.00-8.002.002.00----------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTCAG..............................................................................................................................................................267.000.00-1.00--4.00-2.00-------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTCAAG...............................................................................................................................................................257.000.00-3.002.00-1.00-1.00-------------------------
...................................................................TAAATTTTTTTTTTTTTTTTTTTCAAG............................................................................................................................................................275.000.001.001.001.002.00----------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTTCAG.............................................................................................................................................................275.000.00--2.00-2.00-1.00-------------------------
..................................................................TTAAATTTTTTTTTTTTTTCAAG.................................................................................................................................................................235.000.001.00-1.002.00--1.00-------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTACG...............................................................................................................................................................254.000.00---2.00--2.00-------------------------
......................................................................................................................ATTATTCTTCAGTTCTCAG.................................................................................................................193.000.00----------2.00--------------------1.00
.................................................................CTTAAATTTTTTTTTTTTTTTTTTAAG..............................................................................................................................................................273.000.00----3.00---------------------------
....................................................................AAATTTTTTTTTTTTTTTTTCAAG..............................................................................................................................................................243.000.00---2.00--1.00-------------------------
....................................................................AAATTTTTTTTTTTTTTTTTTTCAAG............................................................................................................................................................263.000.00-1.00-2.00----------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTTCTTG............................................................................................................................................................282.000.00----1.00-1.00-------------------------
.................................................................CTTAAATTTTTTTTTTTTTTTTCTTG...............................................................................................................................................................262.000.00-1.001.00-----------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCCCCA..........................................................................................................................................................262.000.00--------1.001.00----------------------
...............................................................TTCTTAAATTTTTTTTTTTTTTTTTTTG...............................................................................................................................................................2812.002.00--1.00---1.00-------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTTGAAG............................................................................................................................................................282.000.00-2.00------------------------------
........................CATTATTATAGAGCGAATGCATTCAGG.......................................................................................................................................................................................................2712.002.00-----------2.00--------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTAAGG..............................................................................................................................................................262.000.00----1.00-1.00-------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTAACG..............................................................................................................................................................262.000.00----2.00---------------------------
.................................................................CTTAAATTTTTTTTTTTTTTTTTTTCTTG............................................................................................................................................................292.000.00--2.00-----------------------------
...................................................................TAAATTTTTTTTTTTTTTTTTTTCTTG............................................................................................................................................................272.000.00--1.00-1.00---------------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTTTTTTTTTTGC............................................................................................302.000.002.00-------------------------------
.................................................................CTTAAATTTTTTTTTTTTTTCTG..................................................................................................................................................................232.000.00--2.00-----------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTTTTA...........................................................................................282.000.002.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTCTAG.............................................................................................................................................................272.000.00-2.00------------------------------
...................................................................TAAATTTTTTTTTTTTTTTTTACG...............................................................................................................................................................242.000.00---2.00----------------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTTTTTTTTTG..............................................................................................2812.002.002.00-------------------------------
............................................................................TTTTTTTTTTTTTTGCTTAGGGG.......................................................................................................................................................231.000.001.00-------------------------------
............................................................................................................................CTTCAGTTCGATTTTTTTTTAG........................................................................................................221.000.00---------1.00----------------------
.....................................................................AATTTTTTTTTTTTTTTTTTTGCTCC...........................................................................................................................................................261.000.001.00-------------------------------
.....................................................................AATTTTTTTTTTTTTTTTTTTGCGAG...........................................................................................................................................................261.000.001.00-------------------------------
.......................................................................................................................TTATTCTTCAGTTCGATTTTTTTTTTTCT......................................................................................................291.000.001.00-------------------------------
.......................................................CTTTTACTTTCTTAAATTTTTTTTTTG........................................................................................................................................................................271.000.00------1.00-------------------------
............................ATTATAGAGCGAATGCATTCAGGAGC....................................................................................................................................................................................................261.000.00-------------1.00------------------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTTTACC............................................................................................261.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTAATG................................................................................................231.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTTGGA...........................................................................................281.000.001.00-------------------------------
....................................................................AAATTTTTTTTTTTTTTTTTCCAG..............................................................................................................................................................241.000.00--1.00-----------------------------
...................................................................TAAATTTTTTTTTTTTTTTTTTCAT..............................................................................................................................................................251.000.00--1.00-----------------------------
....................................................................AAATTTTTTTTTTTTTTTTTTTCTGG............................................................................................................................................................261.000.001.00-------------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCCGGG..........................................................................................................................................................261.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTCCC...............................................................................................241.000.00-----1.00--------------------------
.................................................................CTTAAATTTTTTTTTTTTTTTTTACG...............................................................................................................................................................261.000.00----1.00---------------------------
...........CGCCTCACCAGTCCATT..............................................................................................................................................................................................................................1711.001.00---------------1.00----------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTTTTTAT............................................................................................281.000.00----1.00---------------------------
.......................CCATTATTATAGAGCGAATGCATTCAG........................................................................................................................................................................................................2711.001.00-----------------------------1.00--
...................................................................TAAATTTTTTTTTTTTTTTTTATA...............................................................................................................................................................241.000.00------1.00-------------------------
.....................................................................AATTTTTTTTTTTTTTTTTTTGCTAG...........................................................................................................................................................261.000.001.00-------------------------------
.....................................................................................................................................GATTTTTTTTTTTTTTTTTTTTGCAACTGG.......................................................................................301.000.00-----1.00--------------------------
.CTTCAACCTCCGCCTTCAG......................................................................................................................................................................................................................................191.000.00--------------1.00-----------------
............................................................ACTTTCTTAAATTTTTTTTA..........................................................................................................................................................................201.000.00-1.00------------------------------
..............................................................TTTCTTAAATTTTTTTTTTTTTTTTTTTG...............................................................................................................................................................2911.001.00--1.00-----------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTCAAT...............................................................................................................................................................251.000.00------1.00-------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTATA...............................................................................................................................................................251.000.00---1.00----------------------------
...................................................................TAAATTTTTTTTTTTTTTTTCTTA...............................................................................................................................................................241.000.00------1.00-------------------------
...................................................................................................................................TCGATTTTTTTTTTTACC.....................................................................................................181.000.001.00-------------------------------
.................................................................................................................................GTTCGATTTTTTTTTTTTTTTGCAG................................................................................................251.000.00--1.00-----------------------------
.....................................................................................................................................................................TTTCCTCTTGGGTTAAGTACA................................................................2111.001.00-1.00------------------------------
..........................TTATTATAGAGCGAATGCATTCAG........................................................................................................................................................................................................2411.001.00-----------------1.00--------------
................................................................TCTTAAATTTTTTTTTTTTTTTTTTTTAG.............................................................................................................................................................291.000.00--1.00-----------------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTTTTTTGC................................................................................................261.000.00-----1.00--------------------------
....................................................................................................................................CGATTTTTTTTTTTTTTCACC.................................................................................................211.000.001.00-------------------------------
.............................................................................................................................TTCAGTTCGATTTTTTTTTTCGC......................................................................................................231.000.001.00-------------------------------
....................................................................AAATTTTTTTTTTTTTTTTTCGC...............................................................................................................................................................231.000.001.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTTCATT............................................................................................................................................................281.000.00---1.00----------------------------
....................................................................AAATTTTTTTTTTTTTTTTTCG................................................................................................................................................................221.000.00---1.00----------------------------
.........................ATTATTATAGAGCGAATG...............................................................................................................................................................................................................1811.001.00----------------------------1.00---
............................................................ACTTTCTTAAATTTTTTTTGT.........................................................................................................................................................................211.000.00-1.00------------------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTTTTTTTTTTC.............................................................................................291.000.001.00-------------------------------
.................................................................CTTAAATTTTTTTTTTTTTTTTTTCTTC.............................................................................................................................................................281.000.00--1.00-----------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCTCAGC.........................................................................................................................................................271.000.00-----1.00--------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTAAG...............................................................................................241.000.001.00-------------------------------
.........................................................................................................................ATTCTTCAGTTCGATTTTTTTTTTTTTT.....................................................................................................2811.001.001.00-------------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCGCCA..........................................................................................................................................................261.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTCTG................................................................................................231.000.00-----1.00--------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTCG...............................................................................................................................................................251.000.00----1.00---------------------------
..............................................................................................................................TCAGTTCGATTTTTTTTTTTTTGC....................................................................................................241.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTTAGG...........................................................................................281.000.001.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTCACC..............................................................................................................................................................261.000.001.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTCTTG...............................................................................................................................................................251.000.00--1.00-----------------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTTTTTTTTAA..............................................................................................281.000.001.00-------------------------------
.............................................................................................................................TTCAGTTCGATTTTTTTTTTTTTTTTTGC................................................................................................291.000.001.00-------------------------------
................................................................................................................................AGTTCGATTTTTTTTTTG........................................................................................................181.000.001.00-------------------------------
.............................................................................................................................TTCAGTTCGATTTTTTTTTTTTTTTTCTGC...............................................................................................301.000.001.00-------------------------------
..........................................................................................................................TTCTTCAGTTCGATTTTTTTTTTTTTTTTTTG................................................................................................321.000.001.00-------------------------------
.................................................................CTTAAATTTTTTTTTTTTTTCCG..................................................................................................................................................................231.000.00---1.00----------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTACTG..................................................................................................211.000.001.00-------------------------------
.................................................................CTTAAATTTTTTTTTTTTTTTTTTTGTTTG...........................................................................................................................................................301.000.00-1.00------------------------------
......................................................................................................................................ATTTTTTTTTTTTTTTTTTTTGCGCT..........................................................................................261.000.001.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTCCAG.............................................................................................................................................................271.000.00--1.00-----------------------------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTTTGCAGT..........................................................................................281.000.001.00-------------------------------
.......................................................................................................................TTATTCTTCAGTTCGATTTTTTTTTTTTTC.....................................................................................................301.000.00-----1.00--------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCGAGC..........................................................................................................................................................261.000.001.00-------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTTTGCAAATCG.......................................................................................2411.001.00--------------------------1.00-----
...................................................................TAAATTTTTTTTTTTTTTTTTCCAG..............................................................................................................................................................251.000.00--1.00-----------------------------
..............................................................TTTCTTAAATTTTTTTTTTTTTTCCAG.................................................................................................................................................................271.000.00---1.00----------------------------
..........................TTATTATAGAGCGAATGCATT...........................................................................................................................................................................................................2111.001.00------------1.00-------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTTTTTTTTGC..............................................................................................281.000.001.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTTCCAG............................................................................................................................................................281.000.00-1.00------------------------------
...............................................................TTCTTAAATTTTTTTTTTTTTTTTTAG................................................................................................................................................................271.000.00----1.00---------------------------
.................................................................CTTAAATTTTTTTTTTTTTTTTTTTGCTAG...........................................................................................................................................................301.000.00-1.00------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTACC...............................................................................................241.000.00-----1.00--------------------------
....................................................................AAATTTTTTTTTTTTTTTTTTTCTA.............................................................................................................................................................251.000.00----1.00---------------------------
.................................................................................................................................GTTCGATTTTTTTTTTTTTTTTTGCCT..............................................................................................271.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTTAG............................................................................................271.000.001.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTTCATG............................................................................................................................................................281.000.00-1.00------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTTA.............................................................................................261.000.00----1.00---------------------------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTTTGAGG...........................................................................................271.000.001.00-------------------------------
.......................CCATTATTATAGAGCGAATGCATT...........................................................................................................................................................................................................2411.001.00------------1.00-------------------
...................................................................TAAATTTTTTTTTTTTTTTTTTCCTG.............................................................................................................................................................261.000.00---1.00----------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTAATG...........................................................................................281.000.001.00-------------------------------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTTCTGT............................................................................................261.000.001.00-------------------------------
................................................................TCTTAAATTTTTTTTTTTTTTTAG..................................................................................................................................................................241.000.00------1.00-------------------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTTTTTC.............................................................................................271.000.001.00-------------------------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTTTTTCG............................................................................................281.000.001.00-------------------------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTTAATG.............................................................................................271.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTTGTT...........................................................................................281.000.00-----1.00--------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCGGC...........................................................................................................................................................251.000.00-----1.00--------------------------
..........................................................................................................................TTCTTCAGTTCGATTTTTTTTTTTTTT.....................................................................................................2711.001.001.00-------------------------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTCTTT.................................................................................................231.000.00-----1.00--------------------------
....................................................................AAATTTTTTTTTTTTTTTTTCTGT..............................................................................................................................................................241.000.00-1.00------------------------------
......................................................................................................................................ATTTTTTTTTTTTTTTTTTTTGCGGGT.........................................................................................271.000.00-----1.00--------------------------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTGCC..............................................................................................241.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTATG..............................................................................................251.000.00----1.00---------------------------
.....................................................................AATTTTTTTTTTTTTTTTTTTGCTTACC.........................................................................................................................................................281.000.001.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTACTG..............................................................................................................................................................261.000.00----1.00---------------------------
.............................................................CTTTCTTAAATTTTTTTTTTTTTTATG..................................................................................................................................................................271.000.00---1.00----------------------------
....................................................................AAATTTTTTTTTTTTTTTTTTTCATG............................................................................................................................................................261.000.00-1.00------------------------------
.......................................................................................................................TTATTCTTCAGTTCGATTTTTTTTTTTTTCGC...................................................................................................321.000.00-----1.00--------------------------
................CACCAGTCCATTATTATAGAGCGAATGC..............................................................................................................................................................................................................2811.001.00-----------------------1.00--------
........CTCCGCCTCACCAGTC..................................................................................................................................................................................................................................1611.001.00----------------------1.00---------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTACC.............................................................................................261.000.001.00-------------------------------
....................................................................................................................................CGATTTTTTTTTTTTCG.....................................................................................................171.000.00---1.00----------------------------
.....................................................................AATTTTTTTTTTTTTTTTTTTGCCGG...........................................................................................................................................................261.000.001.00-------------------------------
...............TCACCAGTCCATTATTATAGAGCGACGCA..............................................................................................................................................................................................................291.000.00-----1.00--------------------------
.............................................................................................................................TTCAGTTCGATTTTTTTTTTTTTTTTTTCTGC.............................................................................................321.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTCAG.................................................................................................221.000.001.00-------------------------------
.......................................................................................................................TTATTCTTCAGTTCGATTTTTTTTTTTTC......................................................................................................291.000.00-----1.00--------------------------
.......................CCATTATTATAGAGCGAATGCATTCAGGAG.....................................................................................................................................................................................................301.000.00------------------1.00-------------
.......................................................................................................................TTATTCTTCAGTTCGATTTTTTCTT..........................................................................................................251.000.001.00-------------------------------
............................................................ACTTTCTTAAATTTTTTTTTTTTG......................................................................................................................................................................241.000.00--1.00-----------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTCAAT..............................................................................................................................................................261.000.00---1.00----------------------------
.......................CCATTATTATAGAGCGAATG...............................................................................................................................................................................................................2011.001.00---------------------1.00----------
.................................................................................................................................GTTCGATTTTTTTTTTTTTGGT...................................................................................................221.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTCGTC..............................................................................................251.000.001.00-------------------------------
.................................................................CTTAAATTTTTTTTTTTTTTTTTCTTG..............................................................................................................................................................271.000.00---1.00----------------------------
..............................................................TTTCTTAAATTTTTTTTTTTAG......................................................................................................................................................................221.000.00---1.00----------------------------
...............................................................................................................................CAGTTCGATTTTTTTTTTTTTTTTTTG................................................................................................271.000.00---1.00----------------------------
.................................................................................................................................GTTCGATTTTTTTTTTTTTTTTTTAAT..............................................................................................271.000.00----1.00---------------------------
....................................................................................................................................................................................................................................ACCAAATTGCATAAAAAGT...191.000.00----------------1.00---------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTGC...............................................................................................241.000.001.00-------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTCTGG.................................................................................................221.000.00--1.00-----------------------------
............................................................ACTTTCTTAAATTTTTTTTC..........................................................................................................................................................................201.000.00-1.00------------------------------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTTTGGGG...........................................................................................271.000.001.00-------------------------------
...........................TATTATAGAGCGAATGCA.............................................................................................................................................................................................................1811.001.00------------------------------1.00-
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTTGG............................................................................................271.000.001.00-------------------------------
.....................................................................................................................................GATTTTTTTTTTTTTTTTTTTTGCAAAAG........................................................................................291.000.00-1.00------------------------------
.......................................................................................................................TTATTCTTCAGTTCGATTTTTTTTTTTGC......................................................................................................291.000.001.00-------------------------------
...................................................................TAAATTTTTTTTTTTTTTTTTTTGAAG............................................................................................................................................................271.000.00--1.00-----------------------------
...................................................................TAAATTTTTTTTTTTTTTTTTTCG...............................................................................................................................................................241.000.00------1.00-------------------------
.....................................................................AATTTTTTTTTTTTTTTTTTTGCTTAAG.........................................................................................................................................................281.000.00-1.00------------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCTGAAG.........................................................................................................................................................271.000.00-----1.00--------------------------
....................................................................AAATTTTTTTTTTTTTTTTTTTCTAG............................................................................................................................................................261.000.00------1.00-------------------------
...............................................................................................................................................................................................................ACATGTTCAAGCTTTATT.........................181.000.00-1.00------------------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTG......................................................................................................201.000.001.00-------------------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTTTTTTCTGC..............................................................................................281.000.001.00-------------------------------
................................................................TCTTAAATTTTTTTTTTTTTTTTTTTTTGG............................................................................................................................................................301.000.001.00-------------------------------
................................................................TCTTAAATTTTTTTTTTTTTATG...................................................................................................................................................................231.000.00--1.00-----------------------------
.......................................................................................................................TTATTCTTCAGTTCGATTTTTTTTTTTTCGC....................................................................................................311.000.00-----1.00--------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCCCAC..........................................................................................................................................................261.000.001.00-------------------------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTAC................................................................................................241.000.001.00-------------------------------
......................................................................................................................................ATTTTTTTTTTTTTTTTTTTTGCGAAA.........................................................................................271.000.001.00-------------------------------
.....................................................................AATTTTTTTTTTTTTTTTTTTGCGTCG..........................................................................................................................................................271.000.001.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTCCAG...............................................................................................................................................................251.000.00-1.00------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTGGGT.................................................................................................221.000.001.00-------------------------------
....................................................................AAATTTTTTTTTTTTTTTTTTTCCGG............................................................................................................................................................261.000.00--1.00-----------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTAAG..............................................................................................251.000.001.00-------------------------------
.................................................................CTTAAATTTTTTTTTTTTTTTTTAAA...............................................................................................................................................................261.000.00------1.00-------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCGGAG..........................................................................................................................................................261.000.001.00-------------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTGAAG..............................................................................................................................................................261.000.00--1.00-----------------------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTTTTCT.............................................................................................271.000.001.00-------------------------------
..............................................................................................................................TCAGTTCGATTTTTTTTTTTTTTTTTCTTT..............................................................................................301.000.001.00-------------------------------
...................................................................TAAATTTTTTTTTTTTTTTTTACTG..............................................................................................................................................................251.000.00--1.00-----------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTACC..............................................................................................251.000.00-----1.00--------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTTCTAA.............................................................................................................................................................271.000.00-1.00------------------------------
..............................................................................................................................TCAGTTCGATTTTTTTTTTTTTTCT...................................................................................................251.000.00-----1.00--------------------------
.........................................................................TTTTTTTTTTTTTTTTTGCTTAGGCG.......................................................................................................................................................261.000.00-----1.00--------------------------
..................................................................TTAAATTTTTTTTTTTTTTTTTCAA...............................................................................................................................................................251.000.00-1.00------------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTGAGG..............................................................................................251.000.001.00-------------------------------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTTTGTTGG..........................................................................................281.000.00-----1.00--------------------------
................................................................TCTTAAATTTTTTTTTTTTTTTTTTTG...............................................................................................................................................................2720.500.50----0.50---------------------------
......................................................................ATTTTTTTTTTTTTTTTTTTGCTTAG..........................................................................................................................................................2630.330.33-----0.33--------------------------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTTTGC.............................................................................................2540.250.250.25-------------------------------
.................................................................................................................................GTTCGATTTTTTTTTTTTTTTTTTTT...............................................................................................2680.250.250.12----0.12--------------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTTTTTGT.................................................................................................2550.200.20-----0.20--------------------------
................................................................................................................................AGTTCGATTTTTTTTTTTTTTTT...................................................................................................2350.200.200.20-------------------------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTTTTG..............................................................................................2680.120.120.12-------------------------------
.................................................................................................................................GTTCGATTTTTTTTTTTTTTTTTTTTTCT............................................................................................2980.120.25-----0.12--------------------------
.................................................................................................................................GTTCGATTTTTTTTTTTTTTTTTTTTTAC............................................................................................2980.120.25---0.12----------------------------
......................................................................................................................................ATTTTTTTTTTTTTTTTTTTTGCAAA..........................................................................................2690.110.110.11-------------------------------

Antisense strand
TCTTCAACCTCCGCCTCACCAGTCCATTATTATAGAGCGAATGCATTCAGGTAATCTTTTACTTTCTTAAATTTTTTTTTTTTTTTTTTTGCTTAGTCTGCCGGCCTTTTAAAGACTCATTATTCTTCAGTTCGATTTTTTTTTTTTTTTTTTTTGCAAATCGCGTTTCCTCTTGGGTTAAGTACATTTTATCAAGAATAAGCACTTACATGTTCAAGCTTTGTGCTCACCAAATTGCATAAAGAGTGCT
..............................................................................................(((((.............))))).....................................................................................................................................
.............................................................62.............................................................................141...........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR189784SRR189782SRR343336SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR189785TAX577741(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR343337
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTTGT............................................................................................... 252.000.00-------2.00------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTGACA.................................................................................................. 211.000.00--------1.00-----------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTTTT............................................................................................ 271.000.00-------1.00------------------------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTC................................................................................................ 221.000.00-------------------------1.00------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTGT................................................................................................ 231.000.00-------1.00------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTGT............................................................................................... 241.000.00-------1.00------------------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTTTTGT............................................................................................. 271.000.00-------1.00------------------------
..............................................................................TTTTTTTTTTTTGCTTAGTTTT...................................................................................................................................................... 221.000.00---------1.00----------------------
.................................................................................................................................GTTCGATTTTTTTTTTTTTTTTTTCCC.............................................................................................. 271.000.00--------------------1.00-----------
....................................................................................................................................CGATTTTTTTTTTTTTTTTTTTTCCCT........................................................................................... 271.000.00-------1.00------------------------
...............................................................................................................................CAGTTCGATTTTTTTTAAG........................................................................................................ 191.000.00--------1.00-----------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTGG............................................................................................. 261.000.00-------1.00------------------------
....................................................................AAATTTTTTTTTTTTTTTTTTTGCTTTTT......................................................................................................................................................... 291.000.00-------------------1.00------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTGT.............................................................................................. 251.000.00-------1.00------------------------
...................................................................................................................................TCGATTTTTTTTTTTTTTTTTTTTTGT............................................................................................ 271.000.00-------1.00------------------------
..................................................................................................................................TTCGATTTTTTTTTTTTTTTTTTTGT.............................................................................................. 261.000.00-------1.00------------------------
..........................................................................TTTTTTTTTTTTTTTTGCTTAGCGA....................................................................................................................................................... 251.000.00------------------------1.00-------