uc010dtc.1_intron_0_0_chr19_2429487

TCAGGAGCTCACGCCAGGGCCTTGAGGACAGGCTGACCCTCCTCCCCGGGGTGGCGTGGGGCTGGGGCACCCTCCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAAGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACTGCAGGGCGGGGGCGGCACCGCTCCCCTGTGACTGCATCCCGCCTCCCTGGGGACCTGCCTGTGGCAGGAAGGAATGGGGGGCCCCAGCCCCAGGCCGGGAAGGAGCCAGCGGCCGACAAAGCAGAAACACCCGCTGCTCCACG
...................................................((.(((.(((..(((...)))))).))).))..((((.........)).))...................................................................................................................................................................................................................
..................................................51.....................................................106.............................................................................................................................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR189784

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

GSM532876(GSM532876)
G547T. (cervix)

SRR189782

SRR040007(GSM532892)
G601T. (cervix)

SRR038854(GSM458537)
MM653. (cell line)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR037934(GSM510472)
293cand4_rep3. (cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

SRR553576(SRX182782)
source: Testis. (testes)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

GSM532883(GSM532883)
G871N. (cervix)

SRR040028(GSM532913)
G026N. (cervix)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR038861(GSM458544)
MM466. (cell line)

SRR038859(GSM458542)
MM386. (cell line)

SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)

SRR029126(GSM416755)
143B. (cell line)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

TAX577579(Rovira)
total RNA. (breast)

SRR040012(GSM532897)
G648N. (cervix)

SRR189786

SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

TAX577453(Rovira)
total RNA. (breast)

SRR038862(GSM458545)
MM472. (cell line)

SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)

SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)

SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)

SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)

TAX577743(Rovira)
total RNA. (breast)

SRR038852(GSM458535)
QF1160MB. (cell line)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)

...................................................................................AGCCTCCTTCAGAAAGTGC...................................................................................................................................................................................................................

2.00

........................................................................TCCGACGGCAGAGCCTCCTCC............................................................................................................................................................................................................................

2.00

.............................................................................................................GTCTTAAAGACACCAAAAC.........................................................................................................................................................................................

2.00

........................................................................TCCGACGGCAGAGCCTCCT..............................................................................................................................................................................................................................

2.00

.....................................................................................................................................................................................................................................................GGGGGGCCCCAGCCCCTCT.................................................

2.00

0.00

2.00

.............................................................................................................................................................................................GCTCCCCTGTGACTGCATCCC.......................................................................................................

2.00

...............................................................................................................................CTGAGCCATGGGCACGC.........................................................................................................................................................................

2.00

........................................................................TCCGACGGCAGAGCCTCCTCCAG..........................................................................................................................................................................................................................

2.00

...................................................TGGCGTGGGGCTGGGGCACCCCCCG.............................................................................................................................................................................................................................................

2.00

0.00

1.00

.........CACGCCAGGGCCTTGAGGACAG..........................................................................................................................................................................................................................................................................................

2.00

1.00

............................................................................................................................................................CCATGGCGTTCACTGCAGG..........................................................................................................................................

2.00

...................................................................................................................................................GTCTCCGGGCCATGGCGTT...................................................................................................................................................

1.00

.......................................................................................................................................................................ACTGCAGGGCGGGGGCGGCACCGCTCCCCCG...................................................................................................................

1.00

0.00

1.00

......................................................................................................................................................................................CGGCACCGCTCCCCTGTGACTGCA...........................................................................................................

1.00

............................................................................................................................................................................................................................................................................GAAGGAGCCAGCGGCCGAC..........................

1.00

.............................................................................................................................AACTGAGCCATGGGCACGCGCCG.....................................................................................................................................................................

1.00

.......................GAGGACAGGCTGACCCTCCT..............................................................................................................................................................................................................................................................................

1.00

......................................................................................................................................ATGGGCACGCGCCGTCTCCGGGCCACGG.......................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................................CTGTGACTGCATCCCGCCTCC.................................................................................................

1.00

........................................................................................................................................................................................................................................................................CCGGGAAGGAGCCAGCGGC..............................

1.00

...............................................................................................................CTTAAAGACACCAAAACTG.......................................................................................................................................................................................

1.00

.....................................................................................................................................................................................................................................................GGGGGGCCCCAGCCCTT...................................................

1.00

0.00

1.00

.......................................................................................................................................................................................................................CCTGGGGACCTGCCTGTGGC..............................................................................

1.00

....................................................................................................................................................................TTCACTGCAGGGCGGGGGCGGCACCGCC.........................................................................................................................

1.00

0.00

1.00

...............................................................................................................................................................................................................................................AGGAATGGGGGGCCCCAGGGG.....................................................

1.00

0.00

1.00

.......................................................................................................................CACCAAAACTGAGCCAT.................................................................................................................................................................................

1.00

.............................................................................................................................................................................................................................................................................AAGGAGCCAGCGGCCGAAGGT.......................

1.00

0.00

1.00

.................................................................................................................TAAAGACACCAAAACTGAGCCATGGGC.............................................................................................................................................................................

1.00

..................................................................................................................................................CGTCTCCGGGCCATGGCGTT...................................................................................................................................................

1.00

...................................................................CACCCTCCGACGGCAGAGCCTCTTC.............................................................................................................................................................................................................................

1.00

0.00

1.00

.......................................................................CTCCGACGGCAGAGCCTCCT..............................................................................................................................................................................................................................

1.00

............................................................................................CAGAAAGTGCAGCTCAAGT..........................................................................................................................................................................................................

1.00

........................................................TGGGGCTGGGGCACCCTCCGACGGCAG......................................................................................................................................................................................................................................

1.00

........................................................TGGGGCTGGGGCACCCCC...............................................................................................................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................................................................................ATGGGGGGCCCCAGCCCCAGGCCGGG............................................

1.00

..........................................................................CGACGGCAGAGCCTCCTTC............................................................................................................................................................................................................................

1.00

....................................................................ACCCTCCGACGGCAGAGCCTCCTCCAG..........................................................................................................................................................................................................................

1.00

0.00

1.00

..........................................................................................................................................GCACGCGCCGTCTCCGGGCCATGGC......................................................................................................................................................

1.00

...............................................................................................................................................................TGGCGTTCACTGCAGGGCGGGGGCGG................................................................................................................................

1.00

..........................................................................CGACGGCAGAGCCTCCTT.............................................................................................................................................................................................................................

1.00

............................................................................................................................AAACTGAGCCATGGGCACGCGCC......................................................................................................................................................................

1.00

.......................................................................................................................................TGGGCACGCGCCGTCTCCGGGCCATGGCGC....................................................................................................................................................

1.00

0.00

1.00

......................................................................................................................................................................................................TGACTGCATCCCGCCTCCCTGGGGACCCG......................................................................................

1.00

0.00

1.00

..................................................................................................................................................................................................................................................AATGGGGGGCCCCAGCCCCAGGCCGGG............................................

1.00

..............................................................................................................................................................................................CTCCCCTGTGACTGCATCCCGCCTCCCTG..............................................................................................

1.00

............................................................................................................................................................CCATGGCGTTCACTGCAGGGCGGGGGCG.................................................................................................................................

1.00

......................TGAGGACAGGCTGACCCTCCTCCCCGGGGTTGC..................................................................................................................................................................................................................................................................

1.00

0.00

1.00

...............AGGGCCTTGAGGACAGGCT.......................................................................................................................................................................................................................................................................................

1.00

..............................................................TGGGGCACCCTCCGACGGCAGA.....................................................................................................................................................................................................................................

1.00

..............................................................TGGGGCACCCTCCGACGGCAGAGCC..................................................................................................................................................................................................................................

1.00

...............................GCTGACCCTCCTCCCCGGGGTGGCG.................................................................................................................................................................................................................................................................

1.00

....................................................................................................GCAGCTCAAGTCTTAAAGA..................................................................................................................................................................................................

1.00

.....AGCTCACGCCAGGGCCTTGAGGACAGGCTG......................................................................................................................................................................................................................................................................................

1.00

........................................................................................................................................................................................................................................................................CCGGGAAGGAGCCAGCGGCCGT...........................

1.00

0.00

1.00

.........................................................GGGGCTGGGGCACCCTCCGACGGC........................................................................................................................................................................................................................................

1.00

........................AGGACAGGCTGACCCTCCTCCCCGGGGC.....................................................................................................................................................................................................................................................................

1.00

0.00

1.00

........TCACGCCAGGGCCTTGAGGACAG..........................................................................................................................................................................................................................................................................................

1.00

......................................................................................................................................ATGGGCACGCGCCGTCTCCGGGCCATGGCGC....................................................................................................................................................

1.00

0.00

1.00

...................................................TGGCGTGGGGCTGGGGCACCCTCCG.............................................................................................................................................................................................................................................

1.00

................................................................................................................................................................................................................................CTGCCTGTGGCAGGAAGGAATGGGG................................................................

1.00

..........................................................................................................................................................................................................................................................................................CCGACAAAGCAGAAACACCCGC.........

1.00

.......................................................................................................................................................................ACTGCAGGGCGGGGGCGGCACCGCTCCCCCGTG.................................................................................................................

1.00

0.00

1.00

...................CCTTGAGGACAGGCTGACCCTCCTCC............................................................................................................................................................................................................................................................................

1.00

.........................................................................CCGACGGCAGAGCCTCCT..............................................................................................................................................................................................................................

1.00

.CAGGAGCTCACGCCAGGGCCTTAAA...............................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.......................................................................................................................................TGGGCACGCGCCGTCTCCGGGCCATGGCGTCC..................................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................................................................................................................................CGGGAAGGAGCCAGCGGCCGAC..........................

1.00

........................................................................TCCGACGGCAGAGCCTCC...............................................................................................................................................................................................................................

1.00

......................................................................CCTCCGACGGCAGAG....................................................................................................................................................................................................................................

0.50

.............................................................................................................................................................................................................................................................CCAGCCCCAGGCCGGGA...........................................

0.33

....................................................................................................................................................................................................................................................................CAGGCCGGGAAGGAGC.....................................

0.25

.....................................................................................................................................................................................................................................................................AGGCCGGGAAGGAGC.....................................

0.25

0.12

.................................................GGTGGCGTGGGGCTGG........................................................................................................................................................................................................................................................

0.14

................................................GGGTGGCGTGGGGCT..........................................................................................................................................................................................................................................................

0.12