ID: uc010czd.2_intron_5_0_chr17_41338462_f.5p
GENE: (6)
chr17:41338412-41338661+


(1)
AGO2.ip 		(13)
B-CELL 		(2)
BRAIN 		(1)
BREAST 		(11)
CELL-LINE 		(2)
CERVIX 		(5)
HEART 		(4)
LIVER 		(2)
OTHER 		(6)
SKIN 		(1)
UTERUS

Sense strand
TGAGAGTCTTGGGATCAGACATGAAGACCCCAGAGGATCCTGCAGTGCAGGTATGAAGGGTATGGCCCAGTCTATCCAATATCGTTTCTTTTTTCTTTTTTAAATAAAGCTGAACAGGTTTCTTTATTTTATTTTTTTATTATACTTTAAGTTCTGAGATACATGTGCAGAATGTGCAGGTTTGTTATATAGGTATACATGAGCCATGGTGGTTTGCTGCACCCATCAACCTATCATCTACCTTAGGTAT
.........................................................(((((.(((...)))))))).......................((((.(((.((....)).))).))))............................................................................................................................
..................................................51.........................................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR343334SRR189784SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR343335GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................................................ATAAAGCTGAACAGGTTGG................................................................................................................................1912.000.00-----5.005.00-----2.00--------------------------------------
......................................................................................................................TTTCTTTATTTTATTTTTTTATTATACTTTAAG...................................................................................................33110.0010.003.002.004.00-1.00----------------------------------------------
........................................................................................................TAAAGCTGAACAGGTTGGAA..............................................................................................................................208.000.00---------5.00--1.00--------------1.00---1.00-------------------
........................................................................................................TAAAGCTGAACAGGTTGGA...............................................................................................................................196.000.00---6.00-----------------------------------------------
.......................................................................................................................TTCTTTATTTTATTTTTTTATTATACTTTAAG...................................................................................................3216.006.003.001.002.00------------------------------------------------
......................................................................................................................TTTCTTTATTTTATTTTTTTCAAG............................................................................................................244.000.002.00-2.00------------------------------------------------
...............................AGAGGATCCTGCAGTGCA.........................................................................................................................................................................................................1813.003.00------------------2.00--------------------1.00-----------
........................................................................................................................TCTTTATTTTATTTTTTTATTATACTTCAAG...................................................................................................313.000.00-2.00--1.00----------------------------------------------
........................................................................................................TAAAGCTGAACAGGTTG.................................................................................................................................172.000.00---2.00-----------------------------------------------
......................................................................................................................TTTCTTTATTTTATTTTTTTATTATACTTTA.....................................................................................................3112.002.001.00-1.00------------------------------------------------
.....................TGAAGACCCCAGAGGATCCTGCAGTG...........................................................................................................................................................................................................2612.002.00-------2.00-------------------------------------------
......................................................................................................AATAAAGCTGAACAGGTTGGAA..............................................................................................................................222.000.00-----1.001.00--------------------------------------------
..........................................................................................................AAGCTGAACAGGTTTTAAA.............................................................................................................................192.000.00---------------------2.00-----------------------------
.........................................................................................................................CTTTATTTTATTTTTTTATTAG...........................................................................................................222.000.002.00--------------------------------------------------
......................................................................................................AATAAAGCTGAACAGGTTGGA...............................................................................................................................212.000.00--------------------2.00------------------------------
......................................................................................................................TTTCTTTATTTTATTTTTTTATTATACTTAAG....................................................................................................322.000.00-2.00-------------------------------------------------
......................................................................................................................TTTCTTTATTTTATTTTTTTATTATACTAAG.....................................................................................................312.000.00-2.00-------------------------------------------------
.......................................................................................................................TTCTTTATTTTATTTTTTTCAAG............................................................................................................232.000.001.00-1.00------------------------------------------------
...........................................................................................................................TTATTTTATTTTTTTATTATACTTTAAA...................................................................................................281.000.00-1.00-------------------------------------------------
.......................................................................................................ATAAAGCTGAACAGGTTGGAA..............................................................................................................................211.000.00----------------------------------------------1.00----
..........GGGATCAGACATGAAGACCCCAGAGGA.....................................................................................................................................................................................................................2711.001.00----------------------------------------1.00----------
......................................................................................................................TTTCTTTATTTTATTTTTTAAG..............................................................................................................221.000.001.00--------------------------------------------------
...........................................................................................................................TTATTTTATTTTTTTATTATACTTTAAT...................................................................................................281.000.001.00--------------------------------------------------
.....................................................................................TTCTTTTTTCTTTTTTAACATG...............................................................................................................................................221.000.001.00--------------------------------------------------
.......................................................................................................ATAAAGCTGAACAGGTTGTAA..............................................................................................................................211.000.00-----------------------------------1.00---------------
.......................................................AAGGGTATGGCCCAGTCTAT...............................................................................................................................................................................2011.001.00-----------------------1.00---------------------------
.............................................................................................................................ATTTTATTTTTTTATTATAACTT......................................................................................................231.000.00-----------1.00---------------------------------------
......................................................................................................................TTTCTTTATTTTATTTTTTCG...............................................................................................................211.000.00-1.00-------------------------------------------------
.........................................................................................................................CTTTATTTTATTTTTTTATTATACTTTAA....................................................................................................2921.001.00-1.00-------------------------------------------------
.........................................................................................................................CTTTATTTTATTTTTTTATTATACTTCAAG...................................................................................................301.000.00----1.00----------------------------------------------
................................................................................................................AACAGGTTTCTTTATTTTATTTTTTTAC..............................................................................................................281.000.00--------1.00------------------------------------------
..................................................................................CGTTTCTTTTTTCTTTTTTTCAG.................................................................................................................................................231.000.00--------1.00------------------------------------------
..AGAGTCTTGGGATCAAAA......................................................................................................................................................................................................................................181.000.00----------------------------------1.00----------------
........................................................................................................TAAAGCTGAACAGGTTGG................................................................................................................................181.000.00--------------------------1.00------------------------
....................ATGAAGACCCCAGAGGAT....................................................................................................................................................................................................................1811.001.00------------------------------------1.00--------------
...........................CCCCAGAGGATCCTGCAGT............................................................................................................................................................................................................1911.001.00----------------------------1.00----------------------
..................................................................................................................................ATTTTTTTATTATACTTTCAAG..................................................................................................221.000.00--------1.00------------------------------------------
.................................AGGATCCTGCAGTGCAGTCGT....................................................................................................................................................................................................211.000.00-------------------------------------1.00-------------
............GATCAGACATGAAGACCCCAGAGG......................................................................................................................................................................................................................2411.001.00---------------------------------------------1.00-----
.................................................................................TCGTTTCTTTTTTCTTTGAG.....................................................................................................................................................201.000.00--------1.00------------------------------------------
.......CTTGGGATCAGACATGAAGACCCCAGAGG......................................................................................................................................................................................................................2911.001.00------------------------------------------------1.00--
................................................................................................................................................................................................................GTGGTTTGCTGCACCATG........................181.000.00--------------------------------1.00------------------
...............................................................................................................................TTTATTTTTTTATTATACTAAG.....................................................................................................221.000.00-1.00-------------------------------------------------
......................................................................................TCTTTTTTCTTTTTTAAATTC...............................................................................................................................................211.000.001.00--------------------------------------------------
............GATCAGACATGAAGACCCCAG.........................................................................................................................................................................................................................2111.001.00------------------------1.00--------------------------
.................................................................................................................................................................................................................................TCAACCTATCATCTACAG.......181.000.00----------------1.00----------------------------------
..................................................................................CGTTTCTTTTTTCTTTTTTAGCC.................................................................................................................................................231.000.00--------1.00------------------------------------------
...................................................................................................................................................TAAGTTCTGAGATACTCCG....................................................................................191.000.00---------------------------------1.00-----------------
.............................................................................................................................ATTTTATTTTTTTATTATATCC.......................................................................................................221.000.00-----------1.00---------------------------------------
.......................................................................................................................TTCTTTATTTTATTTTTTTATTATACTTCAAG...................................................................................................321.000.00----1.00----------------------------------------------
...............................................................................................................................TTTATTTTTTTATTATACTCAAG....................................................................................................231.000.00----1.00----------------------------------------------
.......CTTGGGATCAGACATGAAG................................................................................................................................................................................................................................1911.001.00--------------1.00------------------------------------
..............................................................................................................................TTTTATTTTTTTATTATAACTT......................................................................................................221.000.00-----------1.00---------------------------------------
............GATCAGACATGAAGACCCCA..........................................................................................................................................................................................................................2011.001.00--------------------------------------1.00------------
........................................................................................................................TCTTTATTTTATTTTTTTCAAG............................................................................................................221.000.001.00--------------------------------------------------
...............................................................................................................................TTTATTTTTTTATTATACTTTAGG...................................................................................................241.000.001.00--------------------------------------------------
.................................AGGATCCTGCAGTGCAGCCGC....................................................................................................................................................................................................211.000.00-------------1.00-------------------------------------
.......................................................................................CTTTTTTCTTTTTTAAATAATAAG...........................................................................................................................................241.000.00-1.00-------------------------------------------------
.........TGGGATCAGACATGAAGAC..............................................................................................................................................................................................................................1911.001.00--------------1.00------------------------------------
.................................................................................................................................TATTTTTTTATTATACTAAG.....................................................................................................201.000.00-1.00-------------------------------------------------
........................................................................................................................TCTTTATTTTATTTTTTTATTATACTTTAAG...................................................................................................3111.001.00-1.00-------------------------------------------------
................................................................................................................AACAGGTTTCTTTATTTTATTTTTTTATTACAC.........................................................................................................331.000.00-------------1.00-------------------------------------
..............TCAGACATGAAGACCCCAGAGGA.....................................................................................................................................................................................................................2311.001.00-------1.00-------------------------------------------
..............................................................................................................................TTTTATTTTTTTATTATCTTG.......................................................................................................211.000.00--1.00------------------------------------------------
...............CAGACATGAAGACCCCAG.........................................................................................................................................................................................................................1811.001.00------------------------------1.00--------------------
............GATCAGACATGAAGAC..............................................................................................................................................................................................................................1611.001.00----------1.00----------------------------------------
............................................................................................................................TATTTTATTTTTTTATTATACTTTAAA...................................................................................................271.000.001.00--------------------------------------------------
.........TGGGATCAGACATGAAGACCCCAGAGG......................................................................................................................................................................................................................2711.001.00---------------1.00-----------------------------------
......................GAAGACCCCAGAGGATCCTGCAGTG...........................................................................................................................................................................................................2511.001.00-------------------------1.00-------------------------
..............TCAGACATGAAGACCCCAGAGGATA...................................................................................................................................................................................................................251.000.00-------1.00-------------------------------------------
......................................................................................................................TTTCTTTATTTTATTTTTCG................................................................................................................201.000.00----1.00----------------------------------------------
.....................TGAAGACCCCAGAGGATC...................................................................................................................................................................................................................1811.001.00---------------1.00-----------------------------------
.........TGGGATCAGACATGAAGATA.............................................................................................................................................................................................................................201.000.00--------------1.00------------------------------------
...........................................................................................................................TTATTTTATTTTTTTATTATATG........................................................................................................231.000.001.00--------------------------------------------------
.......CTTGGGATCAGACATGAAGACCCCAT.........................................................................................................................................................................................................................261.000.00-------1.00-------------------------------------------
......................................................................................................................TTTCTTTATTTTATTTTTTTAC..............................................................................................................221.000.00-------------------------------------------------1.00-
.........................................................................................................................CTTTATTTTATTTTTTTATTATACTTTAAG...................................................................................................3020.500.50----0.50----------------------------------------------
................................GAGGATCCTGCAGTG...........................................................................................................................................................................................................1560.170.17--------------------------------------------------0.17
.......................................................................................................................TTCTTTATTTTATTTTTTTATT.............................................................................................................2260.170.17----0.17----------------------------------------------
.................................AGGATCCTGCAGTGC..........................................................................................................................................................................................................1580.120.12-----------0.12---------------------------------------

Antisense strand
TGAGAGTCTTGGGATCAGACATGAAGACCCCAGAGGATCCTGCAGTGCAGGTATGAAGGGTATGGCCCAGTCTATCCAATATCGTTTCTTTTTTCTTTTTTAAATAAAGCTGAACAGGTTTCTTTATTTTATTTTTTTATTATACTTTAAGTTCTGAGATACATGTGCAGAATGTGCAGGTTTGTTATATAGGTATACATGAGCCATGGTGGTTTGCTGCACCCATCAACCTATCATCTACCTTAGGTAT
.........................................................(((((.(((...)))))))).......................((((.(((.((....)).))).))))............................................................................................................................
..................................................51.........................................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR343334SRR189784SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR343335GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................................AGTTCTGAGATACATGTGCCTG............................................................................... 223.000.00----------1.00--------1.00---------1.00---------------------
.....................................................................................................................................................AGTTCTGAGATACATGTGCTG................................................................................ 213.000.00----------1.00------------------------------1.001.00--------
..................................................GTATGAAGGGTATGGA........................................................................................................................................................................................ 162.000.00----------------1.00---------------------------1.00------
.....................................................................................................................................................AGTTCTGAGATACATGCTG.................................................................................. 192.000.00-------------------1.00--1.00----------------------------
.....................................................................................................................................................AGTTCTGAGATACATGTGCACTG.............................................................................. 232.000.00----------2.00----------------------------------------
................................................AGGTATGAAGGGTATGTG........................................................................................................................................................................................ 182.000.00-----------------2.00---------------------------------
................................................................................................................................................................................................................GGTTGATGGGTGCAGCAAACCAC................... 2301.001.00-------------------------------------------1.00-------
.....................................................................................................................................................AGTTCTGAGATACATGTGCAGCTG............................................................................. 241.000.00----------------------1.00----------------------------
........................................................................................TTTTTTCTTTTTTAAATAAAGTTCC......................................................................................................................................... 251.000.00-----------------------------------------------1.00---
................................................................................................................................................................................................................GTGGTTTGCTGCACCCATCAACCTATCATCTGGC........ 341.000.00-------------1.00-------------------------------------