ID: uc010cfy.2_intron_16_0_chr16_70894110_r
GENE: (5)
chr16:70894060-70894641-


(1)
AGO2.ip
(3)
B-CELL
(4)
BRAIN
(5)
BREAST
(11)
CELL-LINE
(6)
HEART
(5)
LIVER
(4)
OTHER
(23)
SKIN
(1)
UTERUS

Sense strand
ACCCGGGTGATTGAGTTCACCACTGTGGGCATAGGAGGGAAGAATCTCCGGTGAGTTGCTTAGGTTTACATTGATTGAATTCACATCGGTCCTAAAGAACTCTAAAAGAATTCAGATAGATGAGCTAGACCTATTCCTATAAGCAGGCTCGATATCCTGGGGTTTGACCTGAGTTTTAGAGGTTTGACTTTAGAGAACTGTTACGTTAAGAAAGCTGAATTCTGTCTCCTTAGTTTTGCCACTGAGGAAAATATGGAAGACACAAAAGTATAATCCCTGACCACCTCCTTAACCACAGAGGATCATTGGCACAGTTGTGCCCTTGGCAGCATTGTTATTCCAAAGTCCAGAACCCTACCCTGACTGTGGATCGCTAGAGGAGATGGAGTTTTTATTTCCACAGTAACAAAGTGCTCTGAACAGTTCTGCTTCCCAGATGGGGGACTGGGTTGGGGCCAGGTTCTAAGAAATTTCTCTTAATCCTCAATCCCCTGTCCCACTCTCTTCTGTCAATTCTCTCCACCCTGGCCAGGACCTTTACCATCCTAAACCCAACCAATAGCACCTACTCCTTCTGCTGGA
............................................................................................................................................................................................................................................................................................................................................................................................................................(((((((.((((((.....(((....)))))))))..)))))))..............................................................................................................................
.................................................................................................................................................................................................................................................................................................................................................................................................................402......................................................459.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335TAX577579(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
......................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGCTCTGAACTCTG.............................................................................................................................................................19113.000.0045.008.00--9.007.006.006.006.00-4.00-3.00---3.00-2.00--2.00-2.002.00--------1.00--1.00-1.00-----1.00--1.00-1.00--1.00--1.00---------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAATAGCACCTATC............174.000.00-----------4.00-----------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGGACTGGGTTGCGC...............................................................................................................................181.000.00-------------------------1.00---------------------------------------
........................GTGGGCATAGGAGGGAAGAATCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------1.00----------------------------------------------------------
.................................................................................CACATCGGTCCTAAAGAACTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00-1.00---------------------------------------------------------------
......................................................................................CGGTCCTAAAGAACTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00----------------------------------1.00------------------------------
..........TTGAGTTCACCACTGTGGGCATAGGAGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00--------------------1.00--------------------------------------------
..............................................................................ATTCACATCGGTCCTAAAGAACTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................261.000.00----------------------------------------1.00------------------------
..................ACCACTGTGGGCATAGGAGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------1.00--------------------------------------------
........................................................................................GTCCTAAAGAACTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................161.000.00--------------------------------1.00--------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................GAGGAGATGGAGTTTTGA............................................................................................................................................................................................181.000.00------------------------------------------1.00----------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCAATCCCCTGTCC.....................................................................................1660.170.17-0.17---------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGTCCCACTCTCT.............................................................................1680.120.12----------------------------------------------------------------0.12

Antisense strand
ACCCGGGTGATTGAGTTCACCACTGTGGGCATAGGAGGGAAGAATCTCCGGTGAGTTGCTTAGGTTTACATTGATTGAATTCACATCGGTCCTAAAGAACTCTAAAAGAATTCAGATAGATGAGCTAGACCTATTCCTATAAGCAGGCTCGATATCCTGGGGTTTGACCTGAGTTTTAGAGGTTTGACTTTAGAGAACTGTTACGTTAAGAAAGCTGAATTCTGTCTCCTTAGTTTTGCCACTGAGGAAAATATGGAAGACACAAAAGTATAATCCCTGACCACCTCCTTAACCACAGAGGATCATTGGCACAGTTGTGCCCTTGGCAGCATTGTTATTCCAAAGTCCAGAACCCTACCCTGACTGTGGATCGCTAGAGGAGATGGAGTTTTTATTTCCACAGTAACAAAGTGCTCTGAACAGTTCTGCTTCCCAGATGGGGGACTGGGTTGGGGCCAGGTTCTAAGAAATTTCTCTTAATCCTCAATCCCCTGTCCCACTCTCTTCTGTCAATTCTCTCCACCCTGGCCAGGACCTTTACCATCCTAAACCCAACCAATAGCACCTACTCCTTCTGCTGGA
............................................................................................................................................................................................................................................................................................................................................................................................................................(((((((.((((((.....(((....)))))))))..)))))))..............................................................................................................................
.................................................................................................................................................................................................................................................................................................................................................................................................................402......................................................459.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335TAX577579(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTCTTCTGTCAAGCA.................................................................. 1931.000.00--9.005.00-----6.00---3.001.00----2.00-----------------------1.00-1.001.00---1.00-------1.00------
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTGCTTCCCAGCGC............................................................................................................................................... 1911.000.00-----------------2.00----2.00----2.002.00------1.00---1.00-------------1.00-----------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTCTTCTGTCAAAGCA................................................................. 209.000.00--1.004.00----------1.00----------------------1.00-------------------1.00---1.00---
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTGCTTCCCAGCG................................................................................................................................................ 183.000.00---------------1.00-1.00-------1.00---------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACTCTCTTCTGTCACAC................................................................... 203.000.00--1.00--------------------------------------1.00------------1.00----------
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTGCTTCCCAGCGA............................................................................................................................................... 192.000.00--------------1.001.00-------------------------------------------------
........................................................................................................................................................................................................................................................................................CCACCTCCTTAACCACAG............................................................................................................................................................................................................................................................................................ 182.000.00--------------------------2.00--------------------------------------
............................................................................................................................................................................................................................................................ATGGAAGACACAAAATCC........................................................................................................................................................................................................................................................................................................................ 181.000.00-------------------------------1.00---------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCTGCTTCCCAGAG................................................................................................................................................ 181.000.00-----------------------------------------------------------1.00-----
..........................................................................................................................................................................................................................ATTCTGTCTCCTTAGCCCG......................................................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------------------------------------1.00--------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCCCTGTCCCATAGA............................................................................... 191.000.00---------------1.00-------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCCCTGTCCCATATA............................................................................... 191.000.00---------------------------------------------------1.00-------------
........................................................................................................................................................................................................................................................................................................................AGTTGTGCCCTTGGCTCAT........................................................................................................................................................................................................................................................... 191.000.00------------------------------1.00----------------------------------
.....................................................................................................................................................................................................................................................................................................................................GCAGCATTGTTATTCCAGA.............................................................................................................................................................................................................................................. 191.000.00------------------------------------------------------------1.00----
...........................................................................................................................................................................................................................................................................................................................................................CACAGTCAGGGTAGGGTTCTG...................................................................................................................................................................................................................... 2111.001.00-1.00---------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCACCTACTCCTTGAC..... 181.000.00-----------------------------1.00-----------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGAAGGAGTAGGTGC.. 1911.001.00-1.00---------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGGTTCTAAGAATG............................................................................................................... 171.000.00------------------------------------------------1.00----------------
.................................................................................................................................................................................................................................................CTGAGGAAAATATGGACAC.................................................................................................................................................................................................................................................................................................................................. 191.000.00--------------------------------------------------------------1.00--
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACTGTTCAGAGC.......................................................................................................................................................... 1620.500.50---------------------------------------------------------------0.50-
............................................................................GACCGATGTGAATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1530.330.33-----------------------------0.33-----------------------------------