ID: uc010cel.1_intron_24_0_chr16_67685749_f
GENE: RLTPR(25)
chr16:67685699-67685873+


(2)
AGO2.ip
(4)
B-CELL
(1)
BRAIN
(2)
BREAST
(7)
CELL-LINE
(1)
FIBROBLAST
(1)
HELA
(1)
LIVER
(1)
OTHER

Sense strand
CCGGAGCTGCTCCCAGAGCAGCTGCTGCAAGATGCCTTCACTAGGCTCAGGTAGGCTGGATGGGGCTGGGCTGGGCAAGGCTGAGCAAAGCCAGCCCATTAACCCCTGTCCTCTCCTGCCCTTAGGGACATGCGGCTATCAATCACGGGGACCTTGGCAGAGAGCATTGTGGCTC
.....................................................(((.(((.(((((.(((.(((((..((((......)))).))))).....))).))))).))).))).......................................................
..................................................51........................................................................125................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037935(GSM510473)
293cand3. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189787SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029127(GSM416756)
A549. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR189786SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
...................................................TAGGCTGGATGGGGCTGGGCTGT.....................................................................................................23112.001.0012.00--------------------
..................................................GTAGGCTGGATGGGGCTGGGCTGGGCAAGGCTGAGCAAAGCCAGCCCATTAACCCCTGTCCTCTCCTG.........................................................6819.009.00-9.00-------------------
...................................................TAGGCTGGATGGGGCTGGGCT.......................................................................................................2118.008.001.00-7.00------------------
......................................................................................................CCCCTGTCCTCTCCTGCCCTTA...................................................2217.007.007.00--------------------
...................................................TAGGCTGGATGGGGCTGGGCTGG.....................................................................................................2317.007.007.00--------------------
......................................................................................................CCCCTGTCCTCTCCTGCCCTTT...................................................225.000.005.00--------------------
...................................................TAGGCTGGATGGGGCTGGGCTAAA....................................................................................................2415.008.005.00--------------------
....................................................AGGCTGGATGGGGCTGGGCTGT.....................................................................................................223.000.003.00--------------------
...................................................TAGGCTGGATGGGGCTGGGCTTA.....................................................................................................2313.008.003.00--------------------
...................................................TAGGCTGGATGGGGCTGGGCTA......................................................................................................2212.008.002.00--------------------
......................................................................................................CCCCTGTCCTCTCCTGCCCTAT...................................................222.000.002.00--------------------
..................................................GTAGGCTGGATGGGGCTGGGCTG......................................................................................................2312.002.00----2.00----------------
.....................CTGCTGCAAGATGCCTTCACTAGGCTCAG.............................................................................................................................2912.002.00-----2.00---------------
....................................................................................................................................CGGCTATCAATCACGGGGACC......................2112.002.00---2.00-----------------
............................................................................................................TCCTCTCCTGCCCTTCTA.................................................182.000.00------2.00--------------
....................................................AGGCTGGATGGGGCTGGGCTGGTTAA.................................................................................................2612.001.002.00--------------------
.......................................................................................................................................................CCTTGGCAGAGAGCATTGT.....1911.001.00---1.00-----------------
......................................................................CTGGGCAAGGCTGAGAAC.......................................................................................181.000.00----------1.00----------
.............................................................................................................................................ATCACGGGGACCTTGGCAGAGAGCATT.......2711.001.00------------1.00--------
....................................................AGGCTGGATGGGGCTGGGCTGG.....................................................................................................2211.001.001.00--------------------
...................................................TAGGCTGGATGGGGCTGGGCAGG.....................................................................................................231.000.001.00--------------------
...................................................................................................................................................GGGACCTTGGCAGAGAGCAT........2011.001.00---1.00-----------------
..............................................TCAGGTAGGCTGGATAGCT..............................................................................................................191.000.00-----------------1.00---
..................................................GTAGGCTGGATGGGGCTGG..........................................................................................................1911.001.00---1.00-----------------
....................................................AGGCTGGATGGGGCTGGCG........................................................................................................191.000.00-------------1.00-------
....................................................AGGCTGGATGGGGCTGGGCTGGAAAT.................................................................................................2611.001.001.00--------------------
.......................GCTGCAAGATGCCTTCACTAGGCTCAG.............................................................................................................................2711.001.00-----------1.00---------
......................................................................................................CCCCTGTCCTCTCCTGCCCTTAT..................................................2311.007.001.00--------------------
.....................................................GGCTGGATGGGGCTGGGCTT......................................................................................................201.000.00--------1.00------------
...........................................GGCTCAGGTAGGCTGGATCGGT..............................................................................................................221.000.00---------1.00-----------
...................................................TAGGCTGGATGGGGCTGGGCTG......................................................................................................2211.001.001.00--------------------
...................................................TAGGCTGGATGGGGCTGGGCTGTAA...................................................................................................2511.001.001.00--------------------
...................................................TAGGCTGGATGGGGCTGGGCTGGT....................................................................................................2411.007.001.00--------------------
......................................................................................................CCCCTGTCCTCTCCTGCCCTTTT..................................................231.000.001.00--------------------
.....................................................GGCTGGATGGGGCTGGGCTGGGCAAGG...............................................................................................2711.001.00----------------1.00----
....AGCTGCTCCCAGAGCAG..........................................................................................................................................................1730.330.33-------------------0.33-
...................................................TAGGCTGGATGGGGC.............................................................................................................1560.330.330.33--------------------
............................................GCTCAGGTAGGCTGG....................................................................................................................1580.120.12--------------------0.12

Antisense strand
CCGGAGCTGCTCCCAGAGCAGCTGCTGCAAGATGCCTTCACTAGGCTCAGGTAGGCTGGATGGGGCTGGGCTGGGCAAGGCTGAGCAAAGCCAGCCCATTAACCCCTGTCCTCTCCTGCCCTTAGGGACATGCGGCTATCAATCACGGGGACCTTGGCAGAGAGCATTGTGGCTC
.....................................................(((.(((.(((((.(((.(((((..((((......)))).))))).....))).))))).))).))).......................................................
..................................................51........................................................................125................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037935(GSM510473)
293cand3. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189787SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029127(GSM416756)
A549. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR189786SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
...............................................................................GCTGAGCAAAGCCAGCCCG............................................................................. 191.000.00-------1.00-------------
................................................................................................CATTAACCCCTGTCCTCA............................................................. 181.000.00---------------1.00-----
.........................................................................................................................TTAGGGACATGCGGCTATGC.................................. 201.000.00--------------1.00------
............................................................................................................TCCTCTCCTGCCCTTAATA................................................ 191.000.00------------------1.00--