ID: uc010bqz.2_intron_2_0_chr16_731597_f
GENE: (3)
chr16:731547-731842+


(1)
AGO1.ip 		(4)
AGO2.ip 		(3)
B-CELL 		(5)
BRAIN 		(8)
BREAST 		(27)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(8)
HEART 		(7)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(16)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CCAGGAGAGCGAGCTGCACTCCTACCTCTCCAGGCTCATTGCCGCGGAGCGTGAGAGGTGGGACCCTCACCCCAGGCCGCCCTGTCTTGGGATAATTCTGAATCACCGACTCCCGACACAAGCGTTTATCGAAGGCTTTACTGGCAAGCAGGAAATGTGGGGAAGTGTGGATGTTAGCTCTGAGATTGGGGTGTGGTCAGACATCTGGCCAGGTCCATCTCTGACCGGCTCCTGGTCAACCCCCAGGGAGCTGGAAGAGTGCCAGCGAAACCACGAGGGTGATGAGGACGACAGCC
..................................................(((((.((.....))))))).((....((((((((((..((.(((((((....(((....((((.(((.((((.(((...))).))))..(((.....)))....))).)))).))).))).))))..))..)))).)))))).((((((....)))))).))...................................................................................
..................................................51................................................................................................................................................................213.................................................................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040037(GSM532922)
G243T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191569(GSM715679)
54genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577740(Rovira)
total RNA. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		GSM339994(GSM339994)
hues6. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029126(GSM416755)
143B. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
..........................................................................................................................................................................................TGGGGTGTGGTCAGACATCTGGC.......................................................................................23118.0018.00--11.004.003.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TTGGGGTGTGGTCAGACATCTGG........................................................................................23113.0013.00----4.00--------1.00--1.001.00------------2.00--------------------1.00----1.00---------------------1.00--1.00-----------------
................................................................................................................................................................GGAAGTGTGGATGTTAGCTCTGAGATTGGGGTGTGGTCAGACATCTGGCCAGGTCCATCTCTGACCGGCTCCTGGTCAACCCC.....................................................83110.0010.0010.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TTGGGGTGTGGTCAGACATCTGGC.......................................................................................2419.009.00----3.00--------2.00-------1.00--------------------------------------1.00--------------------------1.00----1.00------
...................................................................................................................................................................AGTGTGGATGTTAGCTCTGAGATTGGGGTGTGGTCAGACATCTGGCCAGGTCCATCTCTGACCGGCTCCTGGTCAACCCCCA...................................................8218.008.008.00--------------------------------------------------------------------------------------------------
............................................................................................................................................................GTGGGGAAGTGTGGATGTTAGCTCTGAGATTGGGGTGTGGTCAGACATCTGGCCAGGTCCATCTCTGACCGGCTCCTGGTCAACCCCC....................................................8816.006.00-------6.00-------------------------------------------------------------------------------------------
.....................................................AGAGGTGGGACCCTCACCC................................................................................................................................................................................................................................1916.006.00---6.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TTGGGGTGTGGTCAGACATCTG.........................................................................................2215.005.00----------------------1.001.00--------------------1.00-1.00-------------------1.00--------------------------------
................................................................................................................................................................................................................................................................................ACGAGGGTGATGAGGACGAC....2015.005.00-1.00------1.002.00-----------------------------------------------1.00-----------------------------------------
.................................................................................................................................................................................................................................CGGCTCCTGGTCAACCCCCAGT.................................................2215.001.00---------------1.00----------------------1.00--1.001.00---------------------------------------1.00----------------
............................................................................................................ACTCCCGACACAAGCGCTTA........................................................................................................................................................................203.000.00---------------------------2.00-------1.00---------------------------------------------------------------
................................................................................................................................................................................................................................................................................ACGAGGGTGATGAGGACGACAGC.2313.003.00------------1.00------------------------------------1.00---------------------------1.00---------------------
................................................................................................................................................................................................................................................................................ACGAGGGTGATGAGGACGACAGCC2413.003.00-----1.00------1.00----------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................ACCACGAGGGTGATGAGGAC.......2012.002.00----------2.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................ACCACGAGGGTGATGAGGACG......2112.002.00-----------2.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................AGGGTGATGAGGACGACAGCC2112.002.00-1.00------1.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GATTGGGGTGTGGTCAGACATCTGGC.......................................................................................2612.002.00--------------------------2.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................CCACGAGGGTGATGAGGACGACA...2312.002.00-----------1.00-------1.00-------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................ACGAGGGTGATGAGGACGACAG..2212.002.00------------------------2.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................CGAGGGTGATGAGGACGACAGCC2312.002.00----------------------------------------------------------------------------1.00--------1.00-------------
.................................................................................................................................................................................................................................................................................CGAGGGTGATGAGGACGA.....1812.002.00-------------------------------------------1.00-----------------------1.00-------------------------------
...........................................................................................................................................................................................................................................................................AAACCACGAGGGTGATGAGGA........2111.001.00---------1.00-----------------------------------------------------------------------------------------
........................................GCCGCGGAGCGTGAGAGGACAA..........................................................................................................................................................................................................................................221.000.00-------------------------------1.00-------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................AGGGTGATGAGGACGACAGC.2011.001.00-1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................CCACGAGGGTGATGAGGAC.......1911.001.00-------------------------1.00-------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................CCACGAGGGTGATGAGGACGA.....2111.001.00---------------------------------------------------------------------1.00-----------------------------
.................................................................................................................................................................................................................................CGGCTCCTGGTCAACCCCCAG..................................................2111.001.00-----------------------------------------------------------------1.00---------------------------------
.........................................................................................................................................................................................TTGGGGTGTGGTCAGACATC...........................................................................................2011.001.00----------------------1.00----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................GAAGAGTGCCAGCGAAACCAC......................2111.001.00-----1.00---------------------------------------------------------------------------------------------
................CACTCCTACCTCTCCCAAG.....................................................................................................................................................................................................................................................................191.000.00-------------------------------------------------------------1.00-------------------------------------
...................................................................................................................................................................................................................................................................................AGGGTGATGAGGACGACAG..1911.001.00------------------------------------------------1.00--------------------------------------------------
..........................................................................................................................................................................................TGGGGTGTGGTCAGACATCTGGCA......................................................................................2411.0018.00---------------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................................................................................................................................................ACCACGAGGGTGATGAGGACGACAGC.2611.001.00-------------------------------------1.00-------------------------------------------------------------
..............................CAGGCTCATTGCCGCGGAGCGTGA..................................................................................................................................................................................................................................................2411.001.00----------------------------------------------------------------------------------------1.00----------
.....................................................................................................................................................AGGAAATGTGGGGAATTG.................................................................................................................................181.000.00--------------------1.00------------------------------------------------------------------------------
...........................................................................................................................................................TGTGGGGAAGTGTGGATGTTAGCTCTGAGATTGGGGTGTGGTCAGACATCTGGCCAGGTCCATCTCTGACCGGCTCCTGGTCAACCCCCAG..................................................9111.001.001.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................................TGGATGTTAGCTCTGAGATTGGGGTGTGGTCAGACATCTGGCCAGGTCCATCTCTGACCGGCTCCTGGTCAACCCCCAG..................................................7911.001.00----------------------------------------------------------------------------------------------1.00----
...........................................GCGGAGCGTGAGAGGGAG...........................................................................................................................................................................................................................................181.000.00---------------------------------------------------------------------------------------------1.00-----
...........................................................................................................................................................................................................................................................TGGAAGAGTGCCAGCGAAACC........................2111.001.00-----------------------------------------------------------------------------------------------1.00---
.......................................................................................................................................................................................................................CATCTCTGACCGGCTCCTGGT............................................................2111.001.00---------------------------------------------------------------------------1.00-----------------------
.............................................................................................................................................................................................................................................................................ACCACGAGGGTGATGAGGACGA.....2211.001.00-----------------------------------------------------------1.00---------------------------------------
..................................................................................................................................................................................................................................................................................GAGGGTGATGAGGACGACAGC.2111.001.00---------1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................AGAGTGCCAGCGAAACCACGA....................2111.001.00--------------------------------1.00------------------------------------------------------------------
.........................................................................................................................................................................................TTGGGGTGTGGTCAGACATCTGGT.......................................................................................2411.0013.00--------------------------------------------------------------------------------------1.00------------
...................................................................................................................................................................................................................................................................................AGGGTGATGAGGACGACTA..191.000.00-------------------------------1.00-------------------------------------------------------------------
.........................................................................................................................................................................................TTGGGGTGTGGTCAGACATCCGGC.......................................................................................2411.001.00----------------------------1.00----------------------------------------------------------------------
........................................................................................................................................................................................ATTGGGGTGTGGTCAGACATCCGG........................................................................................241.000.00----------------------------1.00----------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................GAGGGTGATGAGGACGACAG..2011.001.00-1.00-------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................ACGAGGGTGATGAGGAC.......1711.001.00-------------------------------------------------------1.00-------------------------------------------
.......................................................................................................................................................................................................................................................................AGCGAAACCACGAGGGTGATGAGG.........2411.001.00-----1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................ACCACGAGGGTGATGAGGACGACAGCC2711.001.00------------1.00--------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................AAACCACGAGGGTGATGAGGACG......2311.001.00----------------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................................................TGGGGTGTGGTCAGACATCT..........................................................................................2011.001.00---------------------------------------------1.00-----------------------------------------------------
....................................................................................................................................................................................................................................................AGGGAGCTGGAAGAGTGCC.................................1911.001.00----------------------------------------------------------------1.00----------------------------------
.........................................................................................................................................................................................TTGGGGTGTGGTCAGACATCTTGA.......................................................................................241.000.00--------------------------------------------------------------------1.00------------------------------
........................................................................................................................................................................................................................ATCTCTGACCGGCTC.................................................................1511.001.00--------------1.00------------------------------------------------------------------------------------
...................................................................................................................................................................AGTGTGGATGTTAGCTCTGAGATTGGGGTGTGGTCAGACATCTGGCCAGGTCCATCTCTGACCGGCTCCTGGTCAACCCCCC...................................................821.000.001.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................ACCACGAGGGTGATGAGG.........1811.001.00--------------------------------------------------1.00------------------------------------------------
.........................................CCGCGGAGCGTGAGAGGTGG...........................................................................................................................................................................................................................................2011.001.00----------------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................AAACCACGAGGGTGATGAGG.........2011.001.00-------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................CCAGCGAAACCACGAGGGTGA..............2111.001.00--------------------------------------------------------------------------------1.00------------------
............................TCCAGGCTCATTGCCGCGGAGCGTGA..................................................................................................................................................................................................................................................2611.001.00-----------------------------------------------------------------------1.00---------------------------
...............................................................................................................CCCGACACAAGCGTTTGT.......................................................................................................................................................................181.000.001.00--------------------------------------------------------------------------------------------------
..............................CAGGCTCATTGCCGCGGAGCGT....................................................................................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................................................................................TTGGGGTGTGGTCAGACATCTGA........................................................................................2311.005.00--------------------1.00------------------------------------------------------------------------------
................................................................................................................................................................................................................................CCGGCTCCTGGTCAACCCCCAGT.................................................231.000.00--------------------------------1.00------------------------------------------------------------------
........................................GCCGCGGAGCGTGAGGAG..............................................................................................................................................................................................................................................181.000.00-----------------------------------------------1.00---------------------------------------------------
..........................................CGCGGAGCGTGAGAGGGAG...........................................................................................................................................................................................................................................191.000.00-----1.00---------------------------------------------------------------------------------------------
...........................................GCGGAGCGTGAGAGGGAGC..........................................................................................................................................................................................................................................191.000.00---------------------1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................CACGAGGGTGATGAGGACG......1911.001.00-------------------------------------------------------------------------1.00-------------------------
..........................................................................................................................................................................ATGTTAGCTCTGAGATTGG...........................................................................................................1911.001.00----------------------------------------------------------------------1.00----------------------------
...................................................................................................................................................................................................................................................................................AGGGTGATGAGGACGATA...181.000.00-1.00-------------------------------------------------------------------------------------------------
..AGGAGAGCGAGCTGCACTC...................................................................................................................................................................................................................................................................................1920.500.50-------------------------------------------------------------------------------------------------0.50-
.CAGGAGAGCGAGCTGCAC.....................................................................................................................................................................................................................................................................................1820.500.50----------------0.50----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................AAACCACGAGGGTGA..............1540.250.25--------------------------------------------------------------------------------------------------0.25

Antisense strand
CCAGGAGAGCGAGCTGCACTCCTACCTCTCCAGGCTCATTGCCGCGGAGCGTGAGAGGTGGGACCCTCACCCCAGGCCGCCCTGTCTTGGGATAATTCTGAATCACCGACTCCCGACACAAGCGTTTATCGAAGGCTTTACTGGCAAGCAGGAAATGTGGGGAAGTGTGGATGTTAGCTCTGAGATTGGGGTGTGGTCAGACATCTGGCCAGGTCCATCTCTGACCGGCTCCTGGTCAACCCCCAGGGAGCTGGAAGAGTGCCAGCGAAACCACGAGGGTGATGAGGACGACAGCC
..................................................(((((.((.....))))))).((....((((((((((..((.(((((((....(((....((((.(((.((((.(((...))).))))..(((.....)))....))).)))).))).))).))))..))..)))).)))))).((((((....)))))).))...................................................................................
..................................................51................................................................................................................................................................213.................................................................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040037(GSM532922)
G243T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191569(GSM715679)
54genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577740(Rovira)
total RNA. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		GSM339994(GSM339994)
hues6. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029126(GSM416755)
143B. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
...........................................................................................................................................................................................................AGAGATGGACCTGGCCAGA.......................................................................... 1915.005.00-4.00------1.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................AGATGGACCTGGCCAGATGTCTG............................................................................ 2313.003.00------3.00--------------------------------------------------------------------------------------------
..................................................................................................................................................................................................AGAGATGGACCTGGCCAGATGTCTGACC.......................................................................... 2812.002.00------2.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AGAGATGGACCTGGCCAGATG.......................................................................... 2112.002.00--------2.00------------------------------------------------------------------------------------------
.........................CTCTCCAGGCTCATTGCCGCGA......................................................................................................................................................................................................................................................... 222.000.00----------2.00----------------------------------------------------------------------------------------
.....TGGAGAGGTAGGAGTGCAGCTCGCTCT........................................................................................................................................................................................................................................................................ 2711.001.00--------------1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................TGGGGTGTGGTCAGACCAC........................................................................................... 191.000.00-----------------------------------------------------------------------------------------1.00---------
..............................................................GCGGCCTGGGGTGAGGGT........................................................................................................................................................................................................................ 1811.001.00------------------1.00--------------------------------------------------------------------------------
...........................................................................................................ACGCTTGTGTCGGGAGTC........................................................................................................................................................................... 1811.001.00------------------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................TCAGAGCTAACATCCACACTTCCCCACA................................................................................................................. 2811.001.00-----1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................TCCCCACATTTCCTGCTTGCCAGTAA..................................................................................................................................... 2611.001.00-----1.00---------------------------------------------------------------------------------------------
...................................................................................................................................................................................................GAGATGGACCTGGCCAGATGTCTGAC........................................................................... 2611.001.00--------------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................................CCGGCTCCTGGTCAACCCCCACC................................................. 231.000.00---------------------------------------------------------------1.00-----------------------------------
......................................................................................................TCACCGACTCCCGACCG................................................................................................................................................................................. 171.000.00---------------------------------------1.00-----------------------------------------------------------
......................................................................................................................................................................................................AGAGATGGACCTGGCCAGATGTCT.......................................................................... 2411.001.00-----------------------------------------------------1.00---------------------------------------------
......................................................................................................TGTGTCGGGAGTCGGTGA................................................................................................................................................................................ 1811.001.00---------------1.00-----------------------------------------------------------------------------------
..........................................................................................GTCGGGAGTCGGTGATTCAGAATTATC................................................................................................................................................................................... 2711.001.00-------------------------1.00-------------------------------------------------------------------------
........................................................................................................................................................................................................CAGAGATGGACCTGGCCAGATGT......................................................................... 2311.001.00--------------------------------------------------------------1.00------------------------------------
....................................................................................................................................................................................................AGAGATGGACCTGGCCAGATGTCTGA.......................................................................... 2611.001.00------------------------------------------------------------------------1.00--------------------------
......................CGCGGCAATGAGCCTGGAGAGGTA.......................................................................................................................................................................................................................................................... 2411.001.00---------------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................................AGAGATGGACCTGGCCAGATGT.......................................................................... 2211.001.00-------------------------------------------------------------------------------1.00-------------------
..................................................................................................................................................................................AGATGTCTGACCACACCCCAATCTCAGA.......................................................................................... 2811.001.00-1.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................ACATCTGGCCAGGTCCATCTATG......................................................................... 231.000.00------1.00--------------------------------------------------------------------------------------------
..........................TCCGCGGCAATGAGCCTGGAGA........................................................................................................................................................................................................................................................ 2211.001.00------------------------------------1.00--------------------------------------------------------------
.............................................................................................................................................................................................................TCAGAGATGGACCTGGCCA........................................................................ 1911.001.00--------------------------------------------------------------------------1.00------------------------
..............TGCACTCCTACCTCTTAGT....................................................................................................................................................................................................................................................................... 191.000.00----------------------------------1.00----------------------------------------------------------------
......................................................................................................................................................................................................CAGAGATGGACCTGGCCAGATGTCT......................................................................... 2511.001.00-----1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GGACCTGGCCAGATGTCTGACC................................................................................ 2211.001.00-----------------------------1.00---------------------------------------------------------------------
................................................................................................................................................................................CCACACCCCAATCTCAGAGC.................................................................................................... 2011.001.00------------------------------------------------------1.00--------------------------------------------
.......................................................................................................................................................................................................GAGATGGACCTGGCCAGATGTC........................................................................... 2211.001.00-----1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................TGGTTTCGCTGGCAC....................... 1511.001.00----------------------------------------------------------1.00----------------------------------------
..................CGGCAATGAGCCTGGAGAGGTAGGAG............................................................................................................................................................................................................................................................ 2611.001.00-------------------------------------------------------------------------------------------1.00-------
...........................................................................................................................................................................................GCCAGATGTCTGACCACACCCC....................................................................................... 2211.001.00-1.00-------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CAATCTCAGAGCTAACATCCA............................................................................................................ 2111.001.00-----1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................AATGTGGGGAAGTGTGGATGTTAGCCTG................................................................................................................... 281.000.00-----------------------1.00---------------------------------------------------------------------------
.................................................................................................................................................................AATCTCAGAGCTAACATCCACACTTC............................................................................................................. 2611.001.00-----1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................................GACCTGGCCAGATGTCTGA................................................................................. 1911.001.00------------------------------------------------------------------------------------------1.00--------
......................................................................................................................................................................................................AGATGGACCTGGCCAGATGTCT............................................................................ 2211.001.00-1.00-------------------------------------------------------------------------------------------------
...........................................................................TCCCAAGACAGGGCGGC............................................................................................................................................................................................................ 1711.001.00-----------------------------------------------------------------------------------1.00---------------
...................................................................................................................................................................................CTGAGATTGGGGTGTGGTCCGCT.............................................................................................. 231.000.00----------------------------------------------------1.00----------------------------------------------
...........................................................................................................AACGCTTGTGTCGGGAGTC.......................................................................................................................................................................... 1911.001.00-----------------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................GTTTCGCTGGCACTC......................... 1520.500.50-----------------0.50---------------------------------------------------------------------------------
................CCTGGAGAGGTAGGAGTG...................................................................................................................................................................................................................................................................... 1820.500.50------------------------------------------------------------------------------------------------0.50--
...............................................................................................................................................................................................CAGATGTCTGACCACA......................................................................................... 1630.330.33---------------------------------0.33-----------------------------------------------------------------