ID: uc010bmt.1_intron_23_0_chr15_84683477_f.5p
GENE: ADAMTSL3(24)
chr15:84683427-84683676+


(1)
BRAIN
(3)
BREAST
(6)
CELL-LINE
(1)
HEART
(3)
LIVER
(2)
OTHER
(5)
SKIN

Sense strand
CACCAATGCTCTTGGAAAGGCAGTGGCAACATCTGTACTCCACTTGCTGGGTAAGTGTCAAATTCTTATTGCTCCTTAAGTGCCTCCTGTAATATGCACAAAGTAGGCCCCAGTTTTGTTGATTTTGGAGTTGAGTGAACGAGATGGACATCAGATGGTTTTAACCATTGCTGCCACTGCCTGCTTAAAAACGAGCACTAAATTCTAACACCCTATTTTACCACCCCGTATTCCCAGCACCTAACACAGA
.................................................................................................................(((((((.((((.......)))).))))))).((.((...((((((....))))))..))))...........................................................................
.................................................................................................................114.................................................................182..................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR189784SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189782SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
......................................................................................................................TTGATTTTGGAGTTGGATC.................................................................................................................1952.000.0052.00--------------------
......................................................................................................................TTGATTTTGGAGTTGGGT..................................................................................................................1819.000.00-10.005.003.001.00----------------
......................................................................................................................TTGATTTTGGAGTTGGGTT.................................................................................................................1912.000.00-6.001.00-2.00--1.00-2.00-----------
......................................................................................................................TTGATTTTGGAGTTGGGG..................................................................................................................181.000.00-1.00-------------------
......................................................................................................................TTGATTTTGGAGTTGGATA.................................................................................................................191.000.001.00--------------------
.......................TGGCAACATCTGTACTCCACTTGCTGGAACG....................................................................................................................................................................................................311.000.00--------------1.00------
.........................................................................................................................................................................................................ATTCTAACACCCTATTAC...............................181.000.00------------------1.00--
...............................................................................................................................................................TTTAACCATTGCTGCTAAG........................................................................191.000.00-----1.00---------------
....................................................................................................................................GAGTGAACGAGATGGACATCAG................................................................................................2211.001.00----------------1.00----
.........................GCAACATCTGTACTCCACTTGC...........................................................................................................................................................................................................2211.001.00-----------1.00---------
...................................................................................................................................................................................................CACTAAATTCTAACACAGGG...................................201.000.00-----1.00---------------

Antisense strand
CACCAATGCTCTTGGAAAGGCAGTGGCAACATCTGTACTCCACTTGCTGGGTAAGTGTCAAATTCTTATTGCTCCTTAAGTGCCTCCTGTAATATGCACAAAGTAGGCCCCAGTTTTGTTGATTTTGGAGTTGAGTGAACGAGATGGACATCAGATGGTTTTAACCATTGCTGCCACTGCCTGCTTAAAAACGAGCACTAAATTCTAACACCCTATTTTACCACCCCGTATTCCCAGCACCTAACACAGA
.................................................................................................................(((((((.((((.......)))).))))))).((.((...((((((....))))))..))))...........................................................................
.................................................................................................................114.................................................................182..................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR189784SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189782SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
.............................................................................................................................................................................................................................CTGGGAATACGGGGTG............. 1612.002.00------2.00--------------
...........................................................................................................................................................................................................................ACCACCCCGTATTCCCCTA............ 191.000.00------------1.00--------
.............................................................................................................................................................................................................................TGGGAATACGGGGTG.............. 1511.001.00-----------------1.00---
..........................................................................................AATATGCACAAAGTAGGTTCT........................................................................................................................................... 211.000.00--------1.00------------
......................................................................................................................TTGATTTTGGAGTTGAACA................................................................................................................. 191.000.00-------1.00-------------
..............................................................................................................................................................................................................................CTGGGAATACGGGGT............. 1511.001.00-------------1.00-------
.............................................................................................................................................................................................................................CACCCCGTATTCCCAGAT........... 181.000.00----------1.00----------
...............................................................................................................................................................................................................................CCCCGTATTCCCAGCAGAAC....... 201.000.00---------------1.00-----
...........................................................................................................................................................................................................................ACCACCCCGTATTCCCGTAG........... 201.000.00--------1.00------------
..................................................................................................................................................TAAAACCATCTGATGTC....................................................................................... 1730.330.33--------------------0.33
....................................................................................................................................TCCATCTCGTTCACTC...................................................................................................... 1630.330.33-------------------0.33-