ID: uc010azl.2_intron_23_0_chr15_30058746_r.3p
GENE: (3)
chr15:30058696-30058945-


(2)
BRAIN 		(7)
BREAST 		(3)
CELL-LINE 		(3)
CERVIX 		(3)
HEART 		(1)
HELA 		(2)
LIVER 		(2)
OTHER 		(7)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
AGATCTGTTTATCAGGAGAACAGAAAACACAGCCTTTATGGAAATGTATTCCTTAGAAATTTGTTGTAGTTGTTTGTGTATTGTTTCTTGCTGGTTCATAGTTAATATGGGATGAGAAGTGTAATATTCCTTTCTCTTTGGAACTGAACGTACATATATGAAAATCAGTCAACTTATTTTTTAACCTTTTTAACTTGCAGACAATTAGAAGGAAGAAGAAAGTTCAAATACCAGTAAGTCGTCCTGATCC
.............................................................(((...(((((..((((((.(((((......(((((..((..((...((((((..........)))))).))..))...))))))))))))))))...((((((.((....)).)))))).........))))).)))...................................................
........................................................57.............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189787TAX577579(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		TAX577739(Rovira)
total RNA. (breast)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		TAX577590(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR040038(GSM532923)
G531N. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
.............................................................TGTTGTAGTTGTTTGTATAG.........................................................................................................................................................................2049.000.0048.00------1.00------------------------
.............................................................TGTTGTAGTTGTTTGTTTAG.........................................................................................................................................................................2015.000.0015.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTATAT.........................................................................................................................................................................2011.000.0011.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTACAG.........................................................................................................................................................................2011.000.0011.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTG............................................................................................................................................................................1728.008.008.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTAGAG.........................................................................................................................................................................207.000.007.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTGTATTT.......................................................................................................................................................................226.000.00-1.002.00---1.00-1.00---1.00-------------------
.............................................................TGTTGTAGTTGTTTGTTTTG.........................................................................................................................................................................206.000.006.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTTGAG.........................................................................................................................................................................205.000.005.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTGTAG.........................................................................................................................................................................2014.001.004.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTTTGG.........................................................................................................................................................................204.000.004.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTGTCTTT.......................................................................................................................................................................224.000.00-1.002.00-----1.00-----------------------
.............................................................TGTTGTAGTTGTTTGTGTGTTT.......................................................................................................................................................................223.000.00-1.001.00---------1.00-------------------
.............................................................TGTTGTAGTTGTTTGTGTCG.........................................................................................................................................................................203.000.003.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTATAC.........................................................................................................................................................................203.000.003.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTGTCGTT.......................................................................................................................................................................223.000.00-2.00----1.00-------------------------
.............................................................TGTTGTAGTTGTTTGTGTTC.........................................................................................................................................................................203.000.003.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTTTAT.........................................................................................................................................................................202.000.002.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTACGG.........................................................................................................................................................................202.000.002.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTTGTG.........................................................................................................................................................................202.000.002.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTAGAC.........................................................................................................................................................................202.000.002.00-------------------------------
..................................................................................................................................................................................................TTGCAGACAATTAGAAGGAAGAA.................................2312.002.00--------------2.00-----------------
.............................................................TGTTGTAGTTGTTTGTATA..........................................................................................................................................................................192.000.002.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTATG..........................................................................................................................................................................192.000.002.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTATGG.........................................................................................................................................................................202.000.002.00-------------------------------
........................................................................................................................................................................................................................................AGTAAGTCGTCCTGATC.1712.002.00---------1.00-----------------1.00----
.............................................................TGTTGTAGTTGTTTGTGTAGGT.......................................................................................................................................................................2212.001.002.00-------------------------------
...........................................................................................................................................................................................................ATTAGAAGGAAGAAGAAAGTT..........................2112.002.00----1.001.00--------------------------
.............................................................TGTTGTAGTTGTTTGTCTAG.........................................................................................................................................................................202.000.002.00-------------------------------
..........................................................................................................................................................................................................AATTAGAAGGAAGAAGAAAGTT..........................2212.002.00----1.00----1.00----------------------
................................................................................................................................................................................................................AAGGAAGAAGAAAGTGACG.......................192.000.00-----------------1.00-----------1.00--
.............................................................TGTTGTAGTTGTTTGTGTATGT.......................................................................................................................................................................2212.001.00--------1.00-------------------1.00---
.............................................................TGTTGTAGTTGTTTGTGTTTTT.......................................................................................................................................................................222.000.00-1.001.00-----------------------------
..................................................................................................................................................................................................................................AATACCAGTAAGTCGTCCTGAT..2211.001.00-----1.00--------------------------
...........................................................................................................................................................................................................ATTAGAAGGAAGAAGAAAGTTCAAA......................2511.001.00----1.00---------------------------
.........................................................................................................................................................................................................................................GTAAGTCGTCCTGATC.1611.001.00------------------1.00-------------
.............................................................TGTTGTAGTTGTTTGTTTTC.........................................................................................................................................................................201.000.001.00-------------------------------
.........................................................AATTTGTTGTAGTTGTGGAC.............................................................................................................................................................................201.000.00-------------1.00------------------
.................................................................................................................................................................................................................................AAATACCAGTAAGTCGTCC......1911.001.00-----------1.00--------------------
.............................................................TGTTGTAGTTGTTTGTTTAC.........................................................................................................................................................................201.000.001.00-------------------------------
.................................................................................................................................................................................................................................AAATACCAGTAAGTCGTCCT.....2011.001.00---1.00----------------------------
.............................................................TGTTGTAGTTGTTTGTTTGC.........................................................................................................................................................................201.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTGTTT.........................................................................................................................................................................201.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTGTA..........................................................................................................................................................................1911.001.00------1.00-------------------------
...........TCAGGAGAACAGAAAACACAGCCTT......................................................................................................................................................................................................................2511.001.00---1.00----------------------------
.............................................................TGTTGTAGTTGTTTGTCTAC.........................................................................................................................................................................201.000.001.00-------------------------------
..............................................................................................................................................................................................................AGAAGGAAGAAGAAAGTTCA........................2021.001.00-------------------1.00------------
.........................................................................................................................................................................................................CAATTAGAAGGAAGAAGAAAGTTCAAATA....................2911.001.00--------------------1.00-----------
.............................................................TGTTGTAGTTGTTTGTGTTGTT.......................................................................................................................................................................221.000.00-1.00------------------------------
...........................................................................................................................................................................................................ATTAGAAGGAAGAAGAAAGTTC.........................2211.001.00----1.00---------------------------
................................................................................................................................................................................TTTTTTAACCTTTTTAACTTGCAG..................................................2411.001.00--------------------------1.00-----
.............................................................TGTTGTAGTTGTTTGTGTGTTA.......................................................................................................................................................................221.000.00---------------1.00----------------
.............................................................TGTTGTAGTTGTTTGTATTG.........................................................................................................................................................................201.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTGTTCTC.......................................................................................................................................................................221.000.00-------1.00------------------------
...........................................................................................................................................................................................................ATTAGAAGGAAGAAGAAAGTTCA........................2311.001.00---1.00----------------------------
..........................................................................................................................................................................................................AATTAGAAGGAAGAAGAAAGTTCAAA......................2611.001.00-------------------------1.00------
..............................................................................................................................................................................................................................TTCAAATACCAGTAATTAC.........191.000.00----------1.00---------------------
..........................................................................................................................................................................................................AATTAGAAGGAAGAAGAAAGTTCA........................2411.001.00---1.00----------------------------
.............................................................TGTTGTAGTTGTTTGTAC...........................................................................................................................................................................181.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTACA..........................................................................................................................................................................191.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTTGT..........................................................................................................................................................................191.000.00-------1.00------------------------
.............................................................TGTTGTAGTTGTTTGTACT..........................................................................................................................................................................191.000.001.00-------------------------------
....................................................................................................................................................................................................................................TACCAGTAAGTCGTCTTAT...191.000.001.00-------------------------------
............................................................................................................................................................................................................TTAGAAGGAAGAAGAAAGTTC.........................2111.001.00----------------1.00---------------
.........................................................AATTTGTTGTAGTTGTTGTC.............................................................................................................................................................................201.000.00-------------1.00------------------
.................................................................................................................................................................................................................................AAATACCAGTAAGTCGTCCTG....2111.001.00-----------1.00--------------------
.............................................................TGTTGTAGTTGTTTGTACCG.........................................................................................................................................................................201.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTACAC.........................................................................................................................................................................201.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGGTTC..........................................................................................................................................................................191.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTATAA.........................................................................................................................................................................201.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTGTAT.........................................................................................................................................................................2011.001.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTACAT.........................................................................................................................................................................201.000.001.00-------------------------------
..............................................................................................................................................................................................................AGAAGGAAGAAGAAAGTTCAAATA....................2411.001.00-----1.00--------------------------
.............................................................TGTTGTAGTTGTTTGTACTG.........................................................................................................................................................................201.000.001.00-------------------------------
..........................................................................................................................................TGGAACTGAACGTACATATATGAAAAT.....................................................................................2711.001.00------------------------1.00-------
.............................................................TGTTGTAGTTGTTTGTTCAG.........................................................................................................................................................................201.000.001.00-------------------------------
.............................................................TGTTGTAGTTGTTTGTGTAGCT.......................................................................................................................................................................2211.001.00-----------------------1.00--------
.............................................................TGTTGTAGTTGTTTGTTTA..........................................................................................................................................................................191.000.001.00-------------------------------
...............................................................................................................................................................................................................GAAGGAAGAAGAAAGTTCA........................1920.500.50------------------------------0.50-
.............................................................TGTTGTAGTTGTTTGTGCCG.........................................................................................................................................................................2020.508.000.50-------------------------------
............................................................................................................................................................................................................TTAGAAGGAAGAAGAAAG............................1830.330.33---------0.33----------------------
...........................................................................................................................................................................................................ATTAGAAGGAAGAAGAA..............................1750.200.20-----0.20--------------------------
..........................................................................................................................................................................................................AATTAGAAGGAAGAAGA...............................1780.120.12-------------------------------0.12

Antisense strand
AGATCTGTTTATCAGGAGAACAGAAAACACAGCCTTTATGGAAATGTATTCCTTAGAAATTTGTTGTAGTTGTTTGTGTATTGTTTCTTGCTGGTTCATAGTTAATATGGGATGAGAAGTGTAATATTCCTTTCTCTTTGGAACTGAACGTACATATATGAAAATCAGTCAACTTATTTTTTAACCTTTTTAACTTGCAGACAATTAGAAGGAAGAAGAAAGTTCAAATACCAGTAAGTCGTCCTGATCC
.............................................................(((...(((((..((((((.(((((......(((((..((..((...((((((..........)))))).))..))...))))))))))))))))...((((((.((....)).)))))).........))))).)))...................................................
........................................................57.............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189787TAX577579(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		TAX577739(Rovira)
total RNA. (breast)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		TAX577590(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR040038(GSM532923)
G531N. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
.............................CAGCCTTTATGGAAATCA........................................................................................................................................................................................................... 181.000.00----------------------1.00---------
...............................................................TTGTAGTTGTTTGTGG........................................................................................................................................................................... 161.000.00----------1.00---------------------
.........................................................................................................................................................ATATATGAAAATCAGCTC............................................................................... 181.000.00---------------------1.00----------
.....................................................................................................TTAATATGGGATGAGTTG................................................................................................................................... 181.000.001.00-------------------------------
......................TAAAGGCTGTGTTTTC.................................................................................................................................................................................................................... 1640.250.25----------0.25---------------------