ID: uc009zzl.2_intron_16_0_chr13_20077418_r.3p
GENE: (2)
chr13:20077368-20077617-


(2)
B-CELL 		(1)
BRAIN 		(4)
BREAST 		(8)
CELL-LINE 		(2)
CERVIX 		(1)
HEART 		(1)
KIDNEY 		(1)
LIVER 		(1)
OTHER 		(1)
SKIN 		(1)
TESTES 		(4)
UTERUS

Sense strand
CCAGCCTAAGATGTTGGTTGCCATCTTGTTGGTTGCCTCCTTTCTAATAAAAAAATGACATTTCAGACCAAATAGTGCTATACACATGAATAGTCAAAACTTAACTGGTTTATGTGCAGAGTAATGAAAGCTAGTTTTACGAGAAAAGTAAATTTTGAATTGTGTCTCCTGTCTGACTGTATTCTTTTGTCATCCTCTAGTCCACCCACAAATGAATTATCAGGAGTGAACCCAGAGGCACGTATGAATG
.....................................................................................................................((((..((((........(((((.......)))))....((((...(((........)))...)))).....)))).))))....................................................
..............................................................................................................111......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR038856(GSM458539)
D11. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038861(GSM458544)
MM466. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038860(GSM458543)
MM426. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038863(GSM458546)
MM603. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR343335SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334SRR189784TAX577588(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189783SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR040012(GSM532897)
G648N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038862(GSM458545)
MM472. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)
.....................................................................................................................................................................................TTCTTTTGTCATCCTTCG...................................................1837.000.0026.00-2.001.00---5.00--3.00----------------------
.....................................................................................................................................................................................TTCTTTTGTCATCCTATGC..................................................1921.000.001.002.001.00-3.002.003.00-3.003.00-1.00------1.00----------1.00---
.....................................................................................................................................................................................TTCTTTTGTCATCCTATG...................................................1814.000.002.00---3.002.002.00----1.002.00--------1.00---------1.00-
.....................................................................................................................................................................................TTCTTTTGTCATCCTTCGC..................................................1911.000.001.00-5.004.00------------------------1.00----
.....................................................................................................................................................................................TTCTTTTGTCATCCTCTGCCT................................................214.000.001.00------------------1.00-----1.001.00------
....................................................................................................................................................................................................................TGAATTATCAGGAGTGAACCCAGAGG............2623.503.50-3.50-------------------------------
....................................................................................................................................................................................................................TGAATTATCAGGAGTGAACCCAGAGGCAC.........2923.003.00-3.00-------------------------------
.....................................................................................................................................................................................TTCTTTTGTCATCCTATGA..................................................193.000.00-----1.00-----------------1.00--------1.00
....................................................................................................................................................................................................................TGAATTATCAGGAGTGAACCCAGAGGC...........2722.502.50-2.50-------------------------------
.....................................................................................................................................................................................TTCTTTTGTCATCCTCCCA..................................................192.000.00---2.00-----------------------------
.....................................................................................................................................................................................TTCTTTTGTCATCCTTCAC..................................................191.000.00--1.00------------------------------
.................................................................................................................................................................................................................................GTGAACCCAGAGGCACGA.......181.000.00-1.00-------------------------------
...............................................................................................................................................................................ACTGTATTCTTTTGTTTTT........................................................191.000.00---------------1.00-----------------
...................................................................................................................GCAGAGTAATGAAAGGGC.....................................................................................................................181.000.00--------------------1.00------------
.....................................................................................................................................................................................TTCTTTTGTCATCCTTCGA..................................................191.000.001.00--------------------------------
......................................................................................................................................................................................................................................CCCAGAGGCACGTATCTTG.191.000.00-----------------1.00---------------
....................................................................................................................................................................................................................TGAATTATCAGGAGTGAACCCAGAG.............2521.001.00-1.00-------------------------------
........................................................................................................................................................................................................................TTATCAGGAGTGAACCCAGAGGCACGT.......2720.500.50-0.50-------------------------------
.......................................................................................................................................................................................................................ATTATCAGGAGTGAACCCAGAGGCA..........2520.500.50-0.50-------------------------------
........................................................................................................................................................................................................................TTATCAGGAGTGAACCCAGAGGCAC.........2520.500.50-0.50-------------------------------
....................................................................................................................................................................................................................TGAATTATCAGGAGTGAACCCAGAGGCACGT.......3120.500.50-0.50-------------------------------

Antisense strand
CCAGCCTAAGATGTTGGTTGCCATCTTGTTGGTTGCCTCCTTTCTAATAAAAAAATGACATTTCAGACCAAATAGTGCTATACACATGAATAGTCAAAACTTAACTGGTTTATGTGCAGAGTAATGAAAGCTAGTTTTACGAGAAAAGTAAATTTTGAATTGTGTCTCCTGTCTGACTGTATTCTTTTGTCATCCTCTAGTCCACCCACAAATGAATTATCAGGAGTGAACCCAGAGGCACGTATGAATG
.....................................................................................................................((((..((((........(((((.......)))))....((((...(((........)))...)))).....)))).))))....................................................
..............................................................................................................111......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR038856(GSM458539)
D11. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038861(GSM458544)
MM466. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038860(GSM458543)
MM426. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038863(GSM458546)
MM603. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR343335SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334SRR189784TAX577588(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189783SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR040012(GSM532897)
G648N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038862(GSM458545)
MM472. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)
..............................................................................................................TATGTGCAGAGTAATGG........................................................................................................................... 174.000.00--------------2.00-1.00-----1.00----------
....................................................................................................................................................................TCTCCTGTCTGACTGTAG.................................................................... 182.000.00-------------2.00-------------------
.................................................................................................................................................................................................CCTCTAGTCCACCCACTGA...................................... 191.000.00---------------------------1.00-----
.....................................................................................................................................................AAATTTTGAATTGTGTGGA.................................................................................. 191.000.00------------------------------1.00--
...........................................................................................................................................................................................CATTTGTGGGTGGACTAGAGGATGACA.................................... 2711.001.00------------------------1.00--------
..............................................................................................................................................TTCAAAATTTACTTTTC........................................................................................... 1780.120.12---------------0.12-----------------