ID: uc009zsh.2_intron_0_0_chr12_81653440_r.5p
GENE: (21)
chr12:81655528-81655777-


(1)
AGO1.ip OTHER.mut 		(9)
BRAIN 		(5)
BREAST 		(8)
CELL-LINE 		(2)
CERVIX 		(1)
HEART 		(1)
KIDNEY 		(3)
LIVER 		(6)
OTHER 		(1)
SKIN 		(4)
UTERUS

Sense strand
GCACATACTCATGTTGACCAGCCACTCAAAGGAGGCAGCACTGACCTGCTGTGAGTAGTTTCCCTTTGGCTGACAAAAAAAAAAAGACAAAAAAATGGAACCTACATAGACTAATAAATATACACTATACTCTTTGGTATGCCCTAGCAGTACAGAAATGAGATAACCCTTTTGAATTGCTTCAGGGGAAAAAGAAATCTTCATATTGTAACACTTAGTCTAGCATTTCCTATCACCATCTGTCTCCTGT
..............................................................................................(((.......))).................((.((((((..((....))..)).)))).))...............................................................................................
.........................................................................74...........................................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577738(Rovira)
total RNA. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334TAX577580(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189783SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR040012(GSM532897)
G648N. (cervix)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
................................................................................................................................................TAGCAGTACAGAAATATTG.......................................................................................1955.000.0013.0027.00--4.001.00---1.002.00-----1.00--2.00------1.00-1.00-1.00----1.00----
................................................................................................................................................TAGCAGTACAGAAATATT........................................................................................1844.000.0017.00---8.0010.00---4.001.00----------2.00---1.00------1.00-------
................................................................................................................................................TAGCAGTACAGAAATACTG.......................................................................................196.000.00-1.00----------3.00---1.00------------1.00----------
......................................................................................................................................................TACAGAAATGAGATAACTGA................................................................................205.000.00-------3.00----------2.00---------------------
.....................................................................................................................................................GTACAGAAATGAGATAACTGAA...............................................................................225.000.00--------1.00--1.00-1.00-2.00------------------------
................................................................................................................................................TAGCAGTACAGAAATTGG........................................................................................183.000.003.00---------------------------------------
................................................................................................................................................TAGCAGTACAGAAATAT.........................................................................................173.000.00-----------------2.00-------------------1.00--
......................................................................................................................................................TACAGAAATGAGATAACTGAA...............................................................................213.000.00--------1.00-----------1.00----------1.00--------
......................................................................................................................................................TACAGAAATGAGATAAATGA................................................................................202.000.00--------1.00--------------1.00----------------
.....................................................................................................................................................GTACAGAAATGAGATAACTGA................................................................................212.000.00-------1.00--1.00-----------------------------
.....................................................................................................................................................GTACAGAAATGAGATAACTG.................................................................................202.000.00-1.00--------------------1.00-----------------
......................................................................................................................................................TACAGAAATGAGATAAGTGT................................................................................201.000.00-------1.00--------------------------------
..............................................................................AAAAAAAGACAAAAAAATCCA.......................................................................................................................................................211.000.00---------------------------1.00------------
.....................................................................................................................................................GTACAGAAATGAGATAAATGA................................................................................211.000.00---------------1.00------------------------
......................................................................................................................................................TACAGAAATGAGATAACTCC................................................................................201.000.00-------------1.00--------------------------
......................................................................................................................................................TACAGAAATGAGATAATAGG................................................................................201.000.00--------1.00-------------------------------
.....................................................................................................................................................GTACAGAAATGAGATAACACA................................................................................211.000.00-------1.00--------------------------------
.....................................................................................................................................................GTACAGAAATGAGATAACTGTA...............................................................................221.000.00--------------------1.00-------------------
......................................................................................................................................................TACAGAAATGAGATAACTGAT...............................................................................211.000.00-------1.00--------------------------------
......................................................................................................................................................TACAGAAATGAGATAACTGG................................................................................201.000.00-----------1.00----------------------------
......................................................................................................................................................TACAGAAATGAGATAACAGAA...............................................................................211.000.00--------------------------------------1.00-
.............................................................................................................................................CCCTAGCAGTACAGAAATGAGATAACCCTT...............................................................................3011.001.00------------------------1.00---------------
.....................................................................................................................................................GTACAGAAATGAGATAACTTA................................................................................211.000.00--------1.00-------------------------------
............................AAGGAGGCAGCACTGTAGA...........................................................................................................................................................................................................191.000.00------------------------------------1.00---
................................................................................................................................................TAGCAGTACAGAAATCTAT.......................................................................................191.000.00-1.00--------------------------------------
.....................................................................................................................................................GTACAGAAATGAGATAACTGC................................................................................211.000.00---------------------------------1.00------
.....................................................................................................................................................GTACAGAAATGAGATAACACAA...............................................................................221.000.00-----------1.00----------------------------
.....................................................................................................................................................GTACAGAAATGAGATAACAGAC...............................................................................221.000.00-------------1.00--------------------------
................................................................................................................................................TAGCAGTACAGAAATCTTG.......................................................................................191.000.00-1.00--------------------------------------
.....................................................................................................................................................GTACAGAAATGAGATAACGGAA...............................................................................221.000.00----------------------------------1.00-----
................................................................................AAAAAGACAAAAAAATGG........................................................................................................................................................1850.200.20---------------------------------------0.20

Antisense strand
GCACATACTCATGTTGACCAGCCACTCAAAGGAGGCAGCACTGACCTGCTGTGAGTAGTTTCCCTTTGGCTGACAAAAAAAAAAAGACAAAAAAATGGAACCTACATAGACTAATAAATATACACTATACTCTTTGGTATGCCCTAGCAGTACAGAAATGAGATAACCCTTTTGAATTGCTTCAGGGGAAAAAGAAATCTTCATATTGTAACACTTAGTCTAGCATTTCCTATCACCATCTGTCTCCTGT
..............................................................................................(((.......))).................((.((((((..((....))..)).)))).))...............................................................................................
.........................................................................74...........................................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577738(Rovira)
total RNA. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334TAX577580(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189783SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR040012(GSM532897)
G648N. (cervix)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
...........................................................................AAAAAAAAAAGACAAAAAAGC.......................................................................................................................................................... 213.000.00--3.00-------------------------------------
..........................................................................AAAAAAAAAAAGACAAAAAAATGGT....................................................................................................................................................... 252.000.00------2.00---------------------------------
..........................................................................AAAAAAAAAAAGACAAAAAACGG......................................................................................................................................................... 232.000.00--1.00---1.00---------------------------------
.........................................................................CAAAAAAAAAAAGACAAAAAAAGTAG....................................................................................................................................................... 262.000.00--1.00---1.00---------------------------------
..........................................................................AAAAAAAAAAAGACAAAAAATGCC........................................................................................................................................................ 241.000.00--1.00-------------------------------------
.........................................................................CAAAAAAAAAAAGACAAAAAAACT......................................................................................................................................................... 241.000.00--1.00-------------------------------------
.............................................................................AAAAAAAAGACAAAAAAATGACT...................................................................................................................................................... 231.000.00---1.00------------------------------------
..........................................................................AAAAAAAAAAAGACAAAAAACGAG........................................................................................................................................................ 241.000.00--1.00-------------------------------------
...........................................................................AAAAAAAAAAGACAAAAAACGG......................................................................................................................................................... 221.000.00--1.00-------------------------------------
.............................................................................AAAAAAAAGACAAAAAAAAG......................................................................................................................................................... 201.000.00---1.00------------------------------------
.......................................................................GACAAAAAAAAAAAGAGGTC............................................................................................................................................................... 201.000.00--1.00-------------------------------------
.........................................................................CAAAAAAAAAAAGACAAAAAAGG.......................................................................................................................................................... 231.000.00------1.00---------------------------------
.........................................................................CAAAAAAAAAAAGACAAAAAAGTAG........................................................................................................................................................ 251.000.00--1.00-------------------------------------
.........................................................................CAAAAAAAAAAAGACAAAAAGAG.......................................................................................................................................................... 231.000.00------1.00---------------------------------
...........................................................................AAAAAAAAAAGACAAAAAAATCATC...................................................................................................................................................... 251.000.00--1.00-------------------------------------
......................................................................................................................................................................................CAGGGGAAAAAGAAATCCC................................................. 191.000.00--1.00-------------------------------------
..........................................................................AAAAAAAAAAAGACAAAAAAACAAG....................................................................................................................................................... 251.000.00--------------1.00-------------------------
.........................................................................CAAAAAAAAAAAGACAAAAATCT.......................................................................................................................................................... 231.000.00--1.00-------------------------------------
............................................................................AAAAAAAAAGACAAAAAACTGG........................................................................................................................................................ 221.000.00--1.00-------------------------------------
.......................................................................GACAAAAAAAAAAAGACAAAATCT........................................................................................................................................................... 241.000.00---1.00------------------------------------
.........................................................................CAAAAAAAAAAAGACAAAAAAAGGCA....................................................................................................................................................... 261.000.00--1.00-------------------------------------
.............................................................................AAAAAAAAGACAAAAAAAGC......................................................................................................................................................... 201.000.00------1.00---------------------------------
......................................................................................................................................................................................CAGGGGAAAAAGAAATCTG................................................. 191.000.00---1.00------------------------------------
..........................................................................AAAAAAAAAAAGACAAAACAAG.......................................................................................................................................................... 221.000.00---1.00------------------------------------
...........................................................................AAAAAAAAAAGACAAAAAACTGG........................................................................................................................................................ 231.000.00--1.00-------------------------------------
........................................................................ACAAAAAAAAAAAGACATTGT............................................................................................................................................................. 211.000.00---1.00------------------------------------
..........................................................................AAAAAAAAAAAGACAAAAAAATTTGG...................................................................................................................................................... 261.000.00--1.00-------------------------------------
.............................................................................AAAAAAAAGACAAAAAAACTAT....................................................................................................................................................... 221.000.00--------------1.00-------------------------
.............................................................................AAAAAAAAGACAAAAAAAACGG....................................................................................................................................................... 221.000.00------1.00---------------------------------
............................................................................................................................................................................................................ATTGTAACACTTAGTCAT............................ 181.000.00---1.00------------------------------------
....................................................................GCTGACAAAAAAAAAATGTG.................................................................................................................................................................. 201.000.00---1.00------------------------------------
...........................................................................AAAAAAAAAAGACAAAAAAAAGC........................................................................................................................................................ 231.000.00--1.00-------------------------------------
..........................................................................AAAAAAAAAAAGACAAAAAATTCG........................................................................................................................................................ 241.000.00------1.00---------------------------------
.........................................................................CAAAAAAAAAAAGACAAAAAAAGCAG....................................................................................................................................................... 261.000.00--1.00-------------------------------------
.....................................................................CTGACAAAAAAAAAAAGACAAAAAAATTG........................................................................................................................................................ 291.000.00---1.00------------------------------------
...........................................................................AAAAAAAAAAGACAAAAAAATAATG...................................................................................................................................................... 251.000.00---1.00------------------------------------
.............................................................................AAAAAAAAGACAAAAAACGTT........................................................................................................................................................ 211.000.00--------------1.00-------------------------
...............................................................................AAAAAAGACAAAAAAATGGT....................................................................................................................................................... 201.000.00---1.00------------------------------------
............................................................................AAAAAAAAAGACAAAAAAATGGACAT.................................................................................................................................................... 261.000.00---1.00------------------------------------
............................................................................AAAAAAAAAGACAAAAAAAGC......................................................................................................................................................... 211.000.00--1.00-------------------------------------
..........................................................................AAAAAAAAAAAGACAAAAAAACTAT....................................................................................................................................................... 251.000.00---1.00------------------------------------
......................................................................................................................................................................................CAGGGGAAAAAGAAATCAC................................................. 191.000.00------1.00---------------------------------