ID: uc009wzt.1_intron_9_0_chr1_201342530_r.3p
GENE: TNNT2(1)
chr1:201342480-201342729-


(6)
CELL-LINE
(1)
CERVIX
(7)
HEART
(1)
OTHER
(17)
SKIN

Sense strand
GGAGTGGGGGTGGGCAGAGTGGATGGAAAGGTTGAGAAACTGCAGACATTGTCTTGAGTGTCACAAATGGAAATGCAGCATCCCAGGCAGTATTGCCTGTTCAGGGGCAAGGAACGAAGTGGACATCAGCAGGTGGCCTTGCTGCCATGTGGGTGTCACTATCTCCCCCAGCAGGGGAGAAAACAGGCTTTTTGTTGCAGGTCACACAGCTCATGAGGGGTGGAACTAGATTCACCCTAGGCCTCGCTGA
............................................................(((((...(((.........)))..(((((((((((((......))))))..........((.((((....)))).)).))))))).)))))..................................................................................................
............................................................61..........................................................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
....................................................................................................................................GTGGCCTTGCTGCCACG.....................................................................................................172282.000.001802.00376.0025.0021.0017.0013.00-4.004.00-3.003.003.00-2.00-2.001.001.001.001.00-1.00-1.00--1.00-----
....................................................................................................................................GTGGCCTTGCTGCCACGA....................................................................................................1812.000.0011.001.00-------------------------------
....................................................................................................................................................................................................................ATGAGGGGTGGAACTCTG....................183.000.00-------------2.00-1.00-----------------
....................................................................................................................................GTGGCCTTGCTGCCATG.....................................................................................................1713.003.003.00--------------------------------
.................................................................AATGGAAATGCAGCATCCCAGGC..................................................................................................................................................................2312.002.00---------1.00------------------1.00----
....................................................................................AGGCAGTATTGCCTGTTCAGGGGC..............................................................................................................................................2411.001.00------1.00--------------------------
....................................................................................................................................GTGGCCTTGCTGCCAAG.....................................................................................................171.000.001.00--------------------------------
...................................................................TGGAAATGCAGCATCCCAGGC..................................................................................................................................................................2111.001.00---------1.00-----------------------
.................................GAGAAACTGCAGACATTGTC.....................................................................................................................................................................................................2011.001.00------1.00--------------------------
................................................................................................................................................................................................................GCTCATGAGGGGTGGAACTAGATTCACC..............2811.001.00------1.00--------------------------
...................................................................................................................................................................................................................CATGAGGGGTGGAACTCTG....................191.000.00-------------1.00-------------------
..................................AGAAACTGCAGACATTGT......................................................................................................................................................................................................1811.001.00------1.00--------------------------
.................AGTGGATGGAAAGGTTGA.......................................................................................................................................................................................................................1811.001.00--------------------------1.00------
...............................................................................................................................................................................................................................AACTAGATTCACCCTAGGCCTCGC...2411.001.00-----------------------------1.00---
............................................................................................TTGCCTGTTCAGGGGCAAGGAACGAAGTGGAC..............................................................................................................................3211.001.00---------------------1.00-----------
.................................................................AATGGAAATGCAGCATCCC......................................................................................................................................................................1911.001.00---------1.00-----------------------
..............................................................................................................................................................................................................CAGCTCATGAGGGGTGGAACTAGAT...................2511.001.00---------------1.00-----------------
.............................................................................................................AGGAACGAAGTGGACATCAGCAGGTG...................................................................................................................2611.001.00------1.00--------------------------
.............................................................................................................AGGAACGAAGTGGACA.............................................................................................................................1611.001.00-------------------------1.00-------
.....................................................................GAAATGCAGCATCCCAGGC..................................................................................................................................................................1930.330.33------0.33--------------------------
................................................................................TCCCAGGCAGTATTG...........................................................................................................................................................1540.250.25------------------------------0.25--
...GTGGGGGTGGGCAGAGTG.....................................................................................................................................................................................................................................1850.200.20--------------------------------0.20

Antisense strand
GGAGTGGGGGTGGGCAGAGTGGATGGAAAGGTTGAGAAACTGCAGACATTGTCTTGAGTGTCACAAATGGAAATGCAGCATCCCAGGCAGTATTGCCTGTTCAGGGGCAAGGAACGAAGTGGACATCAGCAGGTGGCCTTGCTGCCATGTGGGTGTCACTATCTCCCCCAGCAGGGGAGAAAACAGGCTTTTTGTTGCAGGTCACACAGCTCATGAGGGGTGGAACTAGATTCACCCTAGGCCTCGCTGA
............................................................(((((...(((.........)))..(((((((((((((......))))))..........((.((((....)))).)).))))))).)))))..................................................................................................
............................................................61..........................................................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
.............................................................................................TGCCTGTTCAGGGGCACCA.......................................................................................................................................... 191.000.00-----------------------1.00---------
..............................................................................................................................................................................AAAAGCCTGTTTTCTCCC.......................................................... 1840.250.25-------------------------------0.25-