ID: uc009vqj.1_intron_5_0_chr1_23208977_f.5p
GENE: EPHB2(6)
chr1:23208927-23209176+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(12)
B-CELL 		(3)
BRAIN 		(27)
BREAST 		(22)
CELL-LINE 		(4)
CERVIX 		(2)
HEART 		(1)
KIDNEY 		(4)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(16)
SKIN 		(1)
XRN.ip

Sense strand
ACCAGCCCAATGGCGTGATCCTGGACTATGAGCTGCAGTACTATGAGAAGGTACCTATTGGCTGGGTGCTGTCCCCATCACCCACCTCCCTGAGGGCCCCTCTCCCAGGCTGAGGCCTGGGAGTTCTGCCCCACCGCAAGATGAGACGCACTGGTGCAGCAGAAAGAGCACTGGCCTTGGAGTCAGGCTGCCTGGCTCCCAATCCAGCTCCGCTCCTTCCCACTGTGAGACCTCAGGCAGGTGCCTTGAC
.......................................................................................................................((..((((((..((((((..........))...))))..))))))..(((.(((((......)))))))).))..........................................................
.......................................................................................................................120.......................................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189782TAX577743(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		TAX577588(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040024(GSM532909)
G613N. (cervix)		SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)		SRR040012(GSM532897)
G648N. (cervix)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577579(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCAGG............................................................2177.000.0011.006.009.006.003.00-2.001.005.003.001.001.00-2.00--3.002.002.00-1.00-----1.001.00-1.001.00-1.00---1.00----1.00----1.001.00---1.001.00-1.00-1.001.00---1.00-----1.00-------1.001.001.00--------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCAG.............................................................2032.000.001.002.002.00-1.002.002.002.00---2.00--3.00---------1.00--------1.00------1.00--1.001.00--------1.00----1.00------1.00--1.001.001.00---1.00-----1.001.00-1.00--------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCCGG............................................................2119.000.006.005.001.001.001.00--------------1.00-----1.00-----------------------------1.00-------1.00--------------1.00-------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGTAGG............................................................217.000.00----1.00-2.001.00-1.00--1.00---------------------------------------------------1.00---------------------------------
..........................................................................................................................................................................CTGGCCTTGGAGTCAGCAGG............................................................205.000.001.00------------------------1.00--1.00----------------1.00--------------------------1.00-------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCATAAG.............................................................205.000.00---------------------1.00----1.00------------1.00-------------------1.00-------------------1.00------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGAGGC...........................................................2244.000.25--0.50---0.251.00---0.250.500.25------0.25-----------0.25----------------------------------------------------0.25-0.25-0.25--------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCAGA............................................................214.000.001.001.00----------------1.00--------1.00----------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCCG.............................................................203.000.00-1.00--1.00------------1.00--------------------------------------------------------------------------------
..........................................................................................................................................................................CTGGCCTTGGAGTCAGGAGGC...........................................................213.000.002.00----------------------------------1.00--------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCGG................................................................173.000.00-----3.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGTAG.............................................................203.000.00------1.001.00-------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGTCGG............................................................213.000.00---1.00--------1.00--------1.00----------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCGGAA..............................................................192.000.00------------------------1.00---------1.00---------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGCGGC...........................................................222.000.001.001.00------------------------------------------------------------------------------------------------
........................................................................................................................................................................CACTGGCCTTGGAGTCAGGAGGC...........................................................232.000.001.00-----------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAAGGC.............................................................202.000.00--------------------------------------------------------------1.00-------------------1.00---------------
..........................................................................................................................................................................CTGGCCTTGGAGTCAGTAGG............................................................202.000.00----------------------------1.00-------------1.00-------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAT................................................................172.000.00-----2.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGAGG............................................................2141.250.250.25----------0.50-------------------0.25------------------------------------------------------0.25-----------
........................................................................................................................................................................CACTGGCCTTGGAGTCAGGAGG............................................................221.000.001.00-------------------------------------------------------------------------------------------------
........AATGGCGTGATCCTGGACTATGAGCTGCAGTAC.................................................................................................................................................................................................................3311.001.00----------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCATG...............................................................181.000.00-----------------------------1.00--------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCTGCT..............................................................191.000.00-------------1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................TCCAGCTCCGCTCCTTCTAG............................201.000.00-----1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCATG............................................................211.000.00------------------------------------------------------------------1.00-------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGTTGG............................................................211.000.001.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGTC..............................................................191.000.001.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................CACTGGCCTTGGAGTCATAA..............................................................201.000.00---1.00----------------------------------------------------------------------------------------------
.............CGTGATCCTGGACTATGAGCTG.......................................................................................................................................................................................................................2211.001.00-------1.00------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGTGTG............................................................211.000.00------------------------------------------------------------1.00-------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCTA.............................................................201.000.00---------1.00----------------------------------------------------------------------------------------
........................................................................................................................................................................CACTGGCCTTGGAGTCAGCA..............................................................201.000.00-------------------1.00------------------------------------------------------------------------------
..........................................................................................................................................................................CTGGCCTTGGAGTCAGCAG.............................................................191.000.00------------------------------------------------1.00-------------------------------------------------
.....................TGGACTATGAGCTGCAGTACTATGAGA..........................................................................................................................................................................................................2711.001.00--------1.00-----------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCAC.............................................................201.000.00--------------1.00-----------------------------------------------------------------------------------
............................................................................................................................TCTGCCCCACCGCAAGGC............................................................................................................181.000.00--------------------------------------1.00-----------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCTG.............................................................201.000.00-1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCACG............................................................211.000.00-------------------------------1.00------------------------------------------------------------------
............GCGTGATCCTGGACTATGAGCTGCAGTAC.................................................................................................................................................................................................................2911.001.00----------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGCA.............................................................201.000.00--------------------1.00-----------------------------------------------------------------------------
........AATGGCGTGATCCTGGACTATGAGCTGCAGT...................................................................................................................................................................................................................3111.001.00----------1.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................................................CACTGTGAGACCTCAGGCAGGTGCC.....2511.001.00-------------------------------------------------1.00------------------------------------------------
..........................................................................................................................................................................CTGGCCTTGGAGTCATTAG.............................................................191.000.00-------------------------------------1.00------------------------------------------------------------
..........................................................................................................................................................................CTGGCCTTGGAGTCAGGGGGC...........................................................211.000.00------1.00-------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGCCGC...........................................................221.000.00------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................................................................CTGGCCTTGGAGTCAGCCGG............................................................201.000.00--------------------------------------------------1.00-----------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCGGG............................................................211.000.00----1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCTGG............................................................211.000.00-------------1.00------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCATT............................................................211.000.00---------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGTCAC............................................................211.000.00-----------1.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................CTGGCCTTGGAGTCAGTTGG............................................................201.000.00-------------------1.00------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGCGG............................................................211.000.00---1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCACAAG.............................................................201.000.00---------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGCGGT...........................................................221.000.00----------------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCAGC............................................................211.000.00---------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGTA..............................................................191.000.00-----------------------------------------------------------------------1.00--------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGCAT.............................................................201.000.00-------1.00------------------------------------------------------------------------------------------
..........TGGCGTGATCCTGGACTATGAGC.........................................................................................................................................................................................................................2311.001.00----------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCGGA...............................................................181.000.00----1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGTCGT............................................................211.000.00-----1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGAGGA...........................................................2240.750.25----0.25-----------------------------------------------------------------------------------0.25--0.25------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGAGTC...........................................................2240.750.25------------------------------0.25---0.25-------------------------------------------------------0.25-------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGACGC...........................................................2240.500.250.25----------0.25--------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGAGGG...........................................................2240.250.25----0.25---------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGTGGG...........................................................2240.250.25------------0.25-------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGAGCT...........................................................2240.250.25---------------------------------0.25----------------------------------------------------------------
...........................................................................................................................TTCTGCCCCACCGCA................................................................................................................1540.250.25----------------------------------------------------------------------------------------------0.25---
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGTA.............................................................2040.250.25---------------------------------------------------------------------------------------------0.25----
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGACTC...........................................................2240.250.25------------------------------0.25-------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGTG.............................................................2040.250.25------0.25-------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGGGGC...........................................................2240.250.25------0.25-------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGTTG............................................................2140.250.25--------------0.25-----------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGAAGC...........................................................2240.250.25-------------------------------------------------------------------------------------0.25------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGATGC...........................................................2240.250.25-------0.25------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGTGGC...........................................................2240.250.25------------------------------------------------------------------------------------0.25-------------
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGG...............................................................1840.250.25--------------------------------------------------------------------------------------------0.25-----
.........................................................................................................................................................................ACTGGCCTTGGAGTCAGGACA............................................................2140.250.25------------------------------------------------------------------------------------0.25-------------
.......................................................................................CCCTGAGGGCCCCTCT...................................................................................................................................................1670.140.14-----------------------------------------------------------------------------------------------0.14--

Antisense strand
ACCAGCCCAATGGCGTGATCCTGGACTATGAGCTGCAGTACTATGAGAAGGTACCTATTGGCTGGGTGCTGTCCCCATCACCCACCTCCCTGAGGGCCCCTCTCCCAGGCTGAGGCCTGGGAGTTCTGCCCCACCGCAAGATGAGACGCACTGGTGCAGCAGAAAGAGCACTGGCCTTGGAGTCAGGCTGCCTGGCTCCCAATCCAGCTCCGCTCCTTCCCACTGTGAGACCTCAGGCAGGTGCCTTGAC
.......................................................................................................................((..((((((..((((((..........))...))))..))))))..(((.(((((......)))))))).))..........................................................
.......................................................................................................................120.......................................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189782TAX577743(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		TAX577588(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040024(GSM532909)
G613N. (cervix)		SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)		SRR040012(GSM532897)
G648N. (cervix)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577579(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................AGGCTGAGGCCTGGGAGTTCCGC......................................................................................................................... 231.000.00-----------------------1.00--------------------------------------------------------------------------
..............................................................................CACCCACCTCCCTGACA........................................................................................................................................................... 171.000.00-------------------------------------------------------------------------1.00------------------------
................................................................................CCCACCTCCCTGAGGGAAAC...................................................................................................................................................... 201.000.00----------------------1.00---------------------------------------------------------------------------
.....................................................................................................................................................................................................CCCAATCCAGCTCCGCTCTGC................................ 211.000.00-----------------------1.00--------------------------------------------------------------------------
......................................................................................................................................................................TGACTCCAAGGCCAGTGCT................................................................. 1980.120.12-------------------------------------------------------------------------------------------------0.12
...............................................................................................................................................................................................................TGGGAAGGAGCGGAG............................ 1580.120.12------------------------------------------------------------------------------------------------0.12-