ID: uc004dzo.2_intron_10_0_chrX_70518359_f
GENE: (11)
chrX:70518309-70518606+


(1)
AGO2.ip 		(11)
B-CELL 		(3)
BRAIN 		(6)
BREAST 		(22)
CELL-LINE 		(1)
CERVIX 		(3)
HEART 		(3)
HELA 		(8)
LIVER 		(3)
OTHER 		(16)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGTTTTTCAGAGAGAGCAGGAGATTCGGATGGGTCAGATGGCTATGGGAGGTAAGGACTTAGGAGGTTAATGGCTCTGATTTCCTTTTTTGTTTGGTCTTGGGTGAACTATGTAGCTTCTGCTGCCTACTTTAAGGGGGTGACATATATGTCTTACTTAGCCCAGAGGTCTTGTTGAATTGTTTCCTTTGGCATAGAAAGAGACTAACAATCTTTATCCCTTGTGCTGATCACACTACTCTGCCTTAGGTGCTATGGGCATAAACAACAGAGGTGCCATGCCCCCTGCTCCTGTGCCA
...................................................((((((...(((((((((.......)))))))))...(((.((((((((((((((..((((((...((.(((.(((......))).)))))..))))))..)))))).((.((((((................)))))))).......)))))))))))))))))..................................................................................
..................................................51...................................................................................................................................................................216................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040025(GSM532910)
G613T. (cervix)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
..................................................GTAAGGACTTAGGAGGTTAA....................................................................................................................................................................................................................................2019.009.00--------2.00------------2.00--------------1.00-1.00-------------1.00-------------------1.001.00-------
.................................................................................................................................................................CCAGAGGTCTTGTTGAATTGTTTCCTTTGGCATAGAAAGAGACTAACAATCTTTATCCCTTGTGCTGATCACACTACTCTGCCTTA...................................................8618.008.00----8.00----------------------------------------------------------------------------
......................ATTCGGATGGGTCAGATGG.................................................................................................................................................................................................................................................................1917.007.00-1.00-3.00----2.00--1.00---------------------------------------------------------------------
...............GCAGGAGATTCGGATGGGTCAGATG..................................................................................................................................................................................................................................................................2516.006.00----------6.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................................................GGGCATAAACAACAGAG..........................1725.505.50-------5.50-------------------------------------------------------------------------
..............AGCAGGAGATTCGGATGG..........................................................................................................................................................................................................................................................................1815.005.00-3.00-------------------1.00-----------------1.00-----------------------------------------
.................AGGAGATTCGGATGGGTCAGATGGCTATC............................................................................................................................................................................................................................................................295.000.00------------5.00--------------------------------------------------------------------
....................AGATTCGGATGGGTCAGA....................................................................................................................................................................................................................................................................1815.005.00-1.00---3.00----------------------------------------------------------1.00----------------
..................................................GTAAGGACTTAGGAGGA.......................................................................................................................................................................................................................................175.000.00---2.00---3.00-------------------------------------------------------------------------
..........AGAGAGCAGGAGATTCGGACGGG.........................................................................................................................................................................................................................................................................234.000.004.00--------------------------------------------------------------------------------
....................AGATTCGGATGGGTCAGAT...................................................................................................................................................................................................................................................................1914.004.00-----2.00--1.00---------1.00--------------------------------------------------------------
..................................................GTAAGGACTTAGGAGGT.......................................................................................................................................................................................................................................1714.004.00---2.00---------------------------1.00--------------1.00----------------------------------
............................................................................................................................................................................GTTGAATTGTTTCCTTTGGCATAGAAAGAGA...............................................................................................3113.003.00-----------------3.00---------------------------------------------------------------
........................TCGGATGGGTCAGATGGCTATG............................................................................................................................................................................................................................................................2213.003.00---------------3.00-----------------------------------------------------------------
.........................CGGATGGGTCAGATGGCT...............................................................................................................................................................................................................................................................1813.003.00----------------------2.00-1.00--------------------------------------------------------
......................ATTCGGATGGGTCAGATGGCT...............................................................................................................................................................................................................................................................2113.003.00------1.00---------------------1.00------------------------------------1.00---------------
............................ATGGGTCAGATGGCTATGGGAGGCG.....................................................................................................................................................................................................................................................253.000.00--3.00------------------------------------------------------------------------------
......TCAGAGAGAGCAGGAGAT..................................................................................................................................................................................................................................................................................1813.003.002.00-1.00------------------------------------------------------------------------------
.............................................................................................................................................................TAGCCCAGAGGTCTTGTTGAATTGTTTCCTTTGGCATAGAAAGAGACTAACAATCT.....................................................................................5613.003.00----3.00----------------------------------------------------------------------------
..................................................GTAAGGACTTAGGAGGTA......................................................................................................................................................................................................................................1813.004.00-------------------1.00----------------------1.00----------1.00---------------------------
.....................GATTCGGATGGGTCAGAT...................................................................................................................................................................................................................................................................1812.002.00-1.00---1.00---------------------------------------------------------------------------
.................................................................................................................................................................................................TAGAAAGAGACTAACAATC......................................................................................1912.002.00-------------2.00-------------------------------------------------------------------
........................TCGGATGGGTCAGATGGCTAT.............................................................................................................................................................................................................................................................2112.002.00---2.00-----------------------------------------------------------------------------
............................ATGGGTCAGATGGCTATGGGAGGTGCC...................................................................................................................................................................................................................................................272.000.00--2.00------------------------------------------------------------------------------
.............................TGGGTCAGATGGCTATGGGAGGCGC....................................................................................................................................................................................................................................................252.000.002.00--------------------------------------------------------------------------------
..............AGCAGGAGATTCGGATGGGTCAG.....................................................................................................................................................................................................................................................................2312.002.002.00--------------------------------------------------------------------------------
.................AGGAGATTCGGATGGGTC.......................................................................................................................................................................................................................................................................1812.002.00-2.00-------------------------------------------------------------------------------
..........AGAGAGCAGGAGATTCGGATGGGCC.......................................................................................................................................................................................................................................................................252.000.002.00--------------------------------------------------------------------------------
...................GAGATTCGGATGGGTCAGATGG.................................................................................................................................................................................................................................................................2212.002.00---------1.00---1.00-------------------------------------------------------------------
.....................GATTCGGATGGGTCAGATGGCTA..............................................................................................................................................................................................................................................................2312.002.00----------------1.00--1.00-------------------------------------------------------------
......................ATTCGGATGGGTCAGATGGCTATG............................................................................................................................................................................................................................................................2412.002.00------1.00------------------1.00-------------------------------------------------------
........................TCGGATGGGTCAGATGGCTATGGGAGGTG.....................................................................................................................................................................................................................................................292.000.00--2.00------------------------------------------------------------------------------
.........................CGGATGGGTCAGATGGCTATGGGAGGTGCC...................................................................................................................................................................................................................................................302.000.001.00-1.00------------------------------------------------------------------------------
.......................TTCGGATGGGTCAGATGGCTATGGGAGGTGT....................................................................................................................................................................................................................................................3112.001.00--------------------------2.00------------------------------------------------------
............AGAGCAGGAGATTCGGATGGGTC.......................................................................................................................................................................................................................................................................2312.002.002.00--------------------------------------------------------------------------------
...................GAGATTCGGATGGGTCAG.....................................................................................................................................................................................................................................................................1812.002.00-1.00-----------------------------------------1.00-------------------------------------
................CAGGAGATTCGGATGGGTCAGAT...................................................................................................................................................................................................................................................................2312.002.00---2.00-----------------------------------------------------------------------------
........AGAGAGAGCAGGAGATTCGGACGGG.........................................................................................................................................................................................................................................................................252.000.002.00--------------------------------------------------------------------------------
.......................TTCGGATGGGTCAGATGGCTATGG...........................................................................................................................................................................................................................................................2412.002.00----------------------------1.00-------------------1.00--------------------------------
..................GGAGATTCGGATGGGTCA......................................................................................................................................................................................................................................................................1812.002.00-2.00-------------------------------------------------------------------------------
.........................CGGATGGGTCAGATGGCTA..............................................................................................................................................................................................................................................................1912.002.00-----------2.00---------------------------------------------------------------------
...................................................................................................................................................................................................................CTTTATCCCTTGTGCTGAT....................................................................1911.001.00--------------------------------------------------1.00------------------------------
.................AGGAGATTCGGATGGGTCAGATGGCTA..............................................................................................................................................................................................................................................................2711.001.00-----------1.00---------------------------------------------------------------------
..............AGCAGGAGATTCGGATGGGTCAGATGGCC...............................................................................................................................................................................................................................................................291.000.001.00--------------------------------------------------------------------------------
............AGAGCAGGAGATTCGGATGGGCC.......................................................................................................................................................................................................................................................................231.000.001.00--------------------------------------------------------------------------------
..........AGAGAGCAGGAGATTCGGATGGGC........................................................................................................................................................................................................................................................................241.000.001.00--------------------------------------------------------------------------------
............................ATGGGTCAGATGGCTATGGGAGGC......................................................................................................................................................................................................................................................241.000.001.00--------------------------------------------------------------------------------
.................AGGAGATTCGGATGGGTCAGATGGCTATGGGAGGTG.....................................................................................................................................................................................................................................................361.000.00---------1.00-----------------------------------------------------------------------
........AGAGAGAGCAGGAGATTCGGATGGGCCAG.....................................................................................................................................................................................................................................................................2911.001.001.00--------------------------------------------------------------------------------
..................................................GTAAGGACTTAGGAGGTT......................................................................................................................................................................................................................................1811.001.00---------------------------1.00-----------------------------------------------------
......................ATTCGGATGGGTCAGATGGCTATGG...........................................................................................................................................................................................................................................................2511.001.00------------------1.00--------------------------------------------------------------
.......................TTCGGATGGGTCAGATGGCTATGGGAG........................................................................................................................................................................................................................................................2711.001.00---------------------------------------------1.00-----------------------------------
....................AGATTCGGATGGGTCAGATGGCTATGGG..........................................................................................................................................................................................................................................................2811.001.00---------------------------1.00-----------------------------------------------------
.....................GATTCGGATGGGTCAGATGGCTATGGGAG........................................................................................................................................................................................................................................................2911.001.00-----------------------------------------------1.00---------------------------------
.........................CGGATGGGTCAGATGGCTAT.............................................................................................................................................................................................................................................................2011.001.00-1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................ACAGAGGTGCCATGCCCCCTGCCCTG......261.000.00--1.00------------------------------------------------------------------------------
........................TCGGATGGGTCAGATGGCTACGGG..........................................................................................................................................................................................................................................................2411.001.00--1.00------------------------------------------------------------------------------
............................................................AGGAGGTTAATGGCTCTGATT.........................................................................................................................................................................................................................2111.001.00-----------------------------1.00---------------------------------------------------
.......................TTCGGATGGGTCAGATGGCTATGGGAGGTGC....................................................................................................................................................................................................................................................3111.001.00---1.00-----------------------------------------------------------------------------
............AGAGCAGGAGATTCGGATGGGTCAGA....................................................................................................................................................................................................................................................................2611.001.001.00--------------------------------------------------------------------------------
..................................................GTAAGGACTTAGGAGGTAA.....................................................................................................................................................................................................................................1911.004.00--------------------------------------------------------------------1.00------------
.............................................................................................................................................................................................................................................................ATGGGCATAAACAACAGAGGTG.......................2211.001.00-1.00-------------------------------------------------------------------------------
......................................................................TGGCTCTGATTTCCTTTTTTGTTAG...........................................................................................................................................................................................................251.000.001.00--------------------------------------------------------------------------------
..................GGAGATTCGGATGGGTCAGATGG.................................................................................................................................................................................................................................................................2311.001.00-------------1.00-------------------------------------------------------------------
...........................................................................................................................................................................................................................................................CTATGGGCATAAACAACAGAGGT........................2311.001.00-1.00-------------------------------------------------------------------------------
.....................................................................ATGGCTCTGATTTCCTTTT..................................................................................................................................................................................................................1911.001.001.00--------------------------------------------------------------------------------
.....................................................................................................................................................................AGGTCTTGTTGAATTTTG...................................................................................................................181.000.00-----------------------------------1.00---------------------------------------------
.....................................................................................TTTTTGTTTGGTCTTGGGTGAACGT............................................................................................................................................................................................251.000.00--1.00------------------------------------------------------------------------------
.................AGGAGATTCGGATGGGTCAG.....................................................................................................................................................................................................................................................................2011.001.00----------------------------------------------------------------------1.00----------
...................GAGATTCGGATGGGTCAGATGGCTATGGGAGG.......................................................................................................................................................................................................................................................3211.001.00------1.00--------------------------------------------------------------------------
......................ATTCGGATGGGTCAGATGGCTAT.............................................................................................................................................................................................................................................................2311.001.00------1.00--------------------------------------------------------------------------
.......................TTCGGATGGGTCAGATGGCTA..............................................................................................................................................................................................................................................................2111.001.00----------------1.00----------------------------------------------------------------
...................................................................TAATGGCTCTGATTTCCTTTTTTGTTTGG..........................................................................................................................................................................................................2911.001.00--------------1.00------------------------------------------------------------------
.......................TTCGGATGGGTCAGATGGCTATGGGAGGT......................................................................................................................................................................................................................................................2911.001.00------1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................GCCATGCCCCCTGCTCCTGTG...2111.001.00---------------------------------------------------------------1.00-----------------
..................GGAGATTCGGATGGGTCAGAT...................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------------------1.00----------------------
..................................................GTAAGGACTTAGGAGGTTAATGGCTCG.............................................................................................................................................................................................................................271.000.00-----------------------------------------1.00---------------------------------------
...............................................................................................................................................................GCCCAGAGGTCTTGTGTA.........................................................................................................................181.000.00--------------------1.00------------------------------------------------------------
..................................................................TTAATGGCTCTGATTTCCTTTTTGTTT.............................................................................................................................................................................................................271.000.00--------------1.00------------------------------------------------------------------
..............AGCAGGAGATTCGGATGGGTCAGATGGCT...............................................................................................................................................................................................................................................................2911.001.00------------------------------------------------------------------1.00--------------
........AGAGAGAGCAGGAGATTCGGATGGGCC.......................................................................................................................................................................................................................................................................2711.001.001.00--------------------------------------------------------------------------------
..................GGAGATTCGGATGGGTCAGATGGCTATGGGAGGTAA....................................................................................................................................................................................................................................................3611.001.00---------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................................................................CTATGGGCATAAACAACAG............................1911.001.00-------------------------------------------------------------1.00-------------------
...............................................................................TTTCCTTTTTTGTTTGTTCC.......................................................................................................................................................................................................201.000.00--1.00------------------------------------------------------------------------------
.........................CGGATGGGTCAGATGGC................................................................................................................................................................................................................................................................1711.001.00------------------------------------------------------------1.00--------------------
.............................................GGGAGGTAAGGACTTAGGAGG........................................................................................................................................................................................................................................2111.001.001.00--------------------------------------------------------------------------------
.................................................................................TCCTTTTTTGTTTGGTTTTG.....................................................................................................................................................................................................201.000.001.00--------------------------------------------------------------------------------
..................................................GTAAGGACTTAGGAGGTTAATA..................................................................................................................................................................................................................................221.000.00--------------------1.00------------------------------------------------------------
....................................................................................TTTTTTGTTTGGTCTTTGG...................................................................................................................................................................................................191.000.00--1.00------------------------------------------------------------------------------
....................AGATTCGGATGGGTCAGATGGCT...............................................................................................................................................................................................................................................................2311.001.00------1.00--------------------------------------------------------------------------
.......................TTCGGATGGGTCAGATGGTTA..............................................................................................................................................................................................................................................................2111.001.00----------------1.00----------------------------------------------------------------
......................ATTCGGATGGGTCAGATGGCTATGGGAGGTG.....................................................................................................................................................................................................................................................311.000.00------1.00--------------------------------------------------------------------------
...................GAGATTCGGATGGGTCAGATGGC................................................................................................................................................................................................................................................................2311.001.00----------------------------------1.00----------------------------------------------
..................................................GTAAGGACTTAGGAGGTTAATT..................................................................................................................................................................................................................................221.000.00--------------------1.00------------------------------------------------------------
..........AGAGAGCAGGAGATTCGGATGGGCA.......................................................................................................................................................................................................................................................................251.000.00--------------------------------------------1.00------------------------------------
..................GGAGATTCGGATGGGCCA......................................................................................................................................................................................................................................................................181.000.00-1.00-------------------------------------------------------------------------------
..................GGAGATTCGGATGGGTTAG.....................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------1.00------------------------
........AGAGAGAGCAGGAGATTCGGATGGG.........................................................................................................................................................................................................................................................................2511.001.00-----------1.00---------------------------------------------------------------------
................CAGGAGATTCGGATGGGTCAG.....................................................................................................................................................................................................................................................................2111.001.00------------------1.00--------------------------------------------------------------
....................................................................................................................................................................................................................................................................TAAACAACAGAGGTGCCATGT.................211.000.00-------------------------------------1.00-------------------------------------------
.........................CGGATGGGTCAGATGGCTATGGGAGGTG.....................................................................................................................................................................................................................................................281.000.00---------------------------------------------------1.00-----------------------------
............................................................................TGATTTCCTTTTTTGTACTG..........................................................................................................................................................................................................201.000.001.00--------------------------------------------------------------------------------
.....................................................................ATGGCTCTGATTTCCTAG...................................................................................................................................................................................................................181.000.00-----------------------1.00---------------------------------------------------------
................CAGGAGATTCGGATGGGTCAGATGGCTAT.............................................................................................................................................................................................................................................................2911.001.00---------1.00-----------------------------------------------------------------------
...............GCAGGAGATTCGGATGGGAA.......................................................................................................................................................................................................................................................................2011.001.00--------1.00------------------------------------------------------------------------
..............................................................................................................................................................................TGAATTGTTTCCTTTGGCAT........................................................................................................2011.001.00---------------------------------1.00-----------------------------------------------
.....................GATTCGGATGGGTCAGATGGC................................................................................................................................................................................................................................................................2111.001.00-----1.00---------------------------------------------------------------------------
............AGAGCAGGAGATTCGGACGGG.........................................................................................................................................................................................................................................................................211.000.001.00--------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................AGGTGCCATGCCCCCCGC..........181.000.00--1.00------------------------------------------------------------------------------
..............AGCAGGAGATTCGGATGTT.........................................................................................................................................................................................................................................................................191.000.00------------------------1.00--------------------------------------------------------
....................AGATTCGGATGGGTCAGATGGCTATGGGAGGT......................................................................................................................................................................................................................................................3211.001.00---------1.00-----------------------------------------------------------------------
...................GAGATTCGGATGGGTCAGA....................................................................................................................................................................................................................................................................1911.001.00-----1.00---------------------------------------------------------------------------
..................................................GTAAGGACTTAGGAGGCTAA....................................................................................................................................................................................................................................201.000.00--------1.00------------------------------------------------------------------------
.................AGGAGATTCGGATGGGTCAGATGG.................................................................................................................................................................................................................................................................2411.001.00-------------------------1.00-------------------------------------------------------
........................TCGGATGGGTCAGATGGCTA..............................................................................................................................................................................................................................................................2011.001.00------1.00--------------------------------------------------------------------------
...........................................................................................TTTGGTCTTGGGTGAGCT.............................................................................................................................................................................................181.000.00---------------------------------------------------------1.00-----------------------
..................................................GTAAGGACTTAGGAGGTTAATG..................................................................................................................................................................................................................................2211.001.00----------------------------------------1.00----------------------------------------
............................ATGGGTCAGATGGCTATGGGAGGTA.....................................................................................................................................................................................................................................................2511.001.001.00--------------------------------------------------------------------------------
..................GGAGATTCGGATGGGTCAGA....................................................................................................................................................................................................................................................................2011.001.00-------------------1.00-------------------------------------------------------------
............................ATGGGTCAGATGGCTATGGGAGGCAAG...................................................................................................................................................................................................................................................271.000.00--------------1.00------------------------------------------------------------------
................CAGGAGATTCGGATGGGTCAGATGGCTA..............................................................................................................................................................................................................................................................2811.001.00--------------------------------------------------------------1.00------------------
........................TCGGATGGGTCAGATGGC................................................................................................................................................................................................................................................................1811.001.00-----1.00---------------------------------------------------------------------------
..................GGAGATTCGGATGGGTCAGATGGCTATG............................................................................................................................................................................................................................................................2811.001.00-----------------------------------------------------------------------1.00---------
....................AGATTCGGATGGGTCAGATGGCTAT.............................................................................................................................................................................................................................................................2511.001.00-----------------------------1.00---------------------------------------------------
....................................................................................................................................................................................................................................ATCACACTACTCTGCCTTAG..................................................2011.001.00-----1.00---------------------------------------------------------------------------
.......................TTCGGATGGGTCAGATGGCTATGGG..........................................................................................................................................................................................................................................................2511.001.00---1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................AGGTCTTGTTGAATTCTG...................................................................................................................181.000.00-----------------------------------------------------------1.00---------------------
..................................................GTAAGGACTTAGGAGGTAAA....................................................................................................................................................................................................................................2011.004.00--------1.00------------------------------------------------------------------------
...................GAGATTCGGATGGGTCAGATGGCTATGG...........................................................................................................................................................................................................................................................2811.001.00---------1.00-----------------------------------------------------------------------
..............AGCAGGAGATTCGGATGGGGCAG.....................................................................................................................................................................................................................................................................231.000.001.00--------------------------------------------------------------------------------
..TTTTTCAGAGAGAGCAGGAGATT.................................................................................................................................................................................................................................................................................2311.001.00------------------------------1.00--------------------------------------------------
...............GCAGGAGATTCGGATGGG.........................................................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------1.00-----------
......................................................................................................................................................................................................................................CACACTACTCTGCCTTAG..................................................1811.001.00-------------------------------------------------------1.00-------------------------
.......................TTCGGATGGGTCAGATGGC................................................................................................................................................................................................................................................................1911.001.00-1.00-------------------------------------------------------------------------------
.......................TTCGGATGGGTCAGATTTT................................................................................................................................................................................................................................................................191.000.00-1.00-------------------------------------------------------------------------------
.................................................................................................................AGCTTCTGCTGCCTATGA.......................................................................................................................................................................181.000.00------------------------------------------------------1.00--------------------------
.......................TTCGGATGGGTCAGATGGCTATGGGAGGTG.....................................................................................................................................................................................................................................................3011.001.00------1.00--------------------------------------------------------------------------
...............................................................................TTTCCTTTTTTGTTTGGTCTTGGGC..................................................................................................................................................................................................251.000.001.00--------------------------------------------------------------------------------
............................ATGGGTCAGATGGCTATGGGAGGCGC....................................................................................................................................................................................................................................................261.000.001.00--------------------------------------------------------------------------------
................CAGGAGATTCGGATGGGTCAGCT...................................................................................................................................................................................................................................................................2311.001.00---1.00-----------------------------------------------------------------------------
.......................TTCGGATGGGTCAGATGG.................................................................................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------1.00------
......TCAGAGAGAGCAGGAGATTTGG..............................................................................................................................................................................................................................................................................221.000.001.00--------------------------------------------------------------------------------
..TTTTTCAGAGAGAGCAGGAGAT..................................................................................................................................................................................................................................................................................2211.001.001.00--------------------------------------------------------------------------------
......................ATTCGGATGGGTCAGATG..................................................................................................................................................................................................................................................................1811.001.00-------------------------------------------------1.00-------------------------------
........................TCGGATGGGTCAGATGG.................................................................................................................................................................................................................................................................1711.001.00--------------------------------1.00------------------------------------------------
..........................GGATGGGTCAGATGGCTATGGGAGGTGCC...................................................................................................................................................................................................................................................291.000.001.00--------------------------------------------------------------------------------
...........................GATGGGTCAGATGGCTATGGGAGGTT.....................................................................................................................................................................................................................................................261.000.001.00--------------------------------------------------------------------------------
..............AGCAGGAGATTCGGATGGGTCAGACT..................................................................................................................................................................................................................................................................261.000.001.00--------------------------------------------------------------------------------
..............................GGGTCAGATGGCTATGGGA.........................................................................................................................................................................................................................................................1920.500.50---------------------------------------------------------------------------0.50-----
................................GTCAGATGGCTATGGGAG........................................................................................................................................................................................................................................................1820.500.50---0.50-----------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................TGGGCATAAACAACAGA...........................1720.500.50----------------------------------------------------------------------------0.50----
..........................GGATGGGTCAGATGGCTATGG...........................................................................................................................................................................................................................................................2120.500.50---------0.50-----------------------------------------------------------------------
.................................TCAGATGGCTATGGGAGGT......................................................................................................................................................................................................................................................1920.500.50--------0.50------------------------------------------------------------------------
..........................GGATGGGTCAGATGGCTA..............................................................................................................................................................................................................................................................1820.500.50-----------------------------------------------------------------------------0.50---
................................GTCAGATGGCTATGGG..........................................................................................................................................................................................................................................................1640.250.25------------------------------------------------------------------------------0.25--
.................................TCAGATGGCTATGGGAG........................................................................................................................................................................................................................................................1740.250.25------------------------------0.25--------------------------------------------------
...........................GATGGGTCAGATGGC................................................................................................................................................................................................................................................................1550.200.20-------------------------------------------------------------------------------0.20-
.........GAGAGAGCAGGAGATT.................................................................................................................................................................................................................................................................................1680.120.12--------------------------------------------------------------------------------0.12

Antisense strand
TGTTTTTCAGAGAGAGCAGGAGATTCGGATGGGTCAGATGGCTATGGGAGGTAAGGACTTAGGAGGTTAATGGCTCTGATTTCCTTTTTTGTTTGGTCTTGGGTGAACTATGTAGCTTCTGCTGCCTACTTTAAGGGGGTGACATATATGTCTTACTTAGCCCAGAGGTCTTGTTGAATTGTTTCCTTTGGCATAGAAAGAGACTAACAATCTTTATCCCTTGTGCTGATCACACTACTCTGCCTTAGGTGCTATGGGCATAAACAACAGAGGTGCCATGCCCCCTGCTCCTGTGCCA
...................................................((((((...(((((((((.......)))))))))...(((.((((((((((((((..((((((...((.(((.(((......))).)))))..))))))..)))))).((.((((((................)))))))).......)))))))))))))))))..................................................................................
..................................................51...................................................................................................................................................................216................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040025(GSM532910)
G613T. (cervix)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
...............................................................................................................................................................................................CATAGAAAGAGACTAAGA......................................................................................... 181.000.00--------------1.00------------------------------------------------------------------
...................................................................................................................................................................................................................CTTTATCCCTTGTGCTGGT.................................................................... 191.000.00-------------------------------------------------------------------1.00-------------
................................................................................................................TAGCTTCTGCTGCCTTGTG....................................................................................................................................................................... 191.000.00-----------------------1.00---------------------------------------------------------