ID: uc004dfk.3_intron_14_0_chrX_41448846_r.5p
GENE: (7)
chrX:41468957-41469206-


(2)
BRAIN
(1)
BREAST
(13)
CELL-LINE
(1)
CERVIX
(1)
HEART
(1)
HELA
(1)
LIVER
(2)
OTHER
(4)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
ATTTTCTACACAGTGTTTTCCAGGATCAGCATCTTCACACACTACTAGATGTAAGTCTGTCTTTTTATTATTCTTCTTTTTTGGTGAATTGAATATTGGCCGGGCACGGTGGCTCATGCCTGTAGTCCAAGCACTTTGGGAGGCAGAGGCGGGCGTATCAGGAGGTCAGGAGACTGAGACCATCCTGGCCAACATGGTGAAACGTGGTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCGCAT
...........................................................((..(((((((...........)))))))..))...(((((((((....((((.((...((((..((((..((.(((((.....)))))))))))....))))...((((....)))))))))))))))))))..........................................................
........................................................57.............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189784SRR037935(GSM510473)
293cand3. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040023(GSM532908)
G575T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................TTTTTATTATTCTTCTCTC..........................................................................................................................................................................1916.000.00--12.00-4.00--------------------------
..............................................................................................................................................................................TGAGACCATCCTGGCCAACGG.......................................................214.000.00-4.00-----------------------------
..............................................................................................................................................................................TGAGACCATCCTGGCCAACGGCG.....................................................234.000.001.003.00-----------------------------
.............................................................TTTTTATTATTCTTCTCTCT.........................................................................................................................................................................203.000.00--3.00----------------------------
............................................................................................................................................................................ACTGAGACCATCCTGGCCAACAGTG.....................................................252.000.002.00------------------------------
............................................................................................................................................................................ACTGAGACCATCCTGGCCAACGG.......................................................232.000.002.00------------------------------
..............................................................TTTTATTATTCTTCTCTCT.........................................................................................................................................................................192.000.00--2.00----------------------------
................................................................................................TGGCCGGGCACGGTGGCTCATGCCTATG..............................................................................................................................282.000.00-2.00-----------------------------
..............................................................................................................................................................................TGAGACCATCCTGGCCAACGGTG.....................................................232.000.002.00------------------------------
...............TTTTCCAGGATCAGCATCTTCACACAC................................................................................................................................................................................................................2712.002.00------2.00------------------------
..............................................................................................................................................................................TGAGACCATCCTGGCCAACGGGG.....................................................232.000.002.00------------------------------
...................................................................TTATTCTTCTTTTTTGGCC....................................................................................................................................................................191.000.001.00------------------------------
.........................................................................................................ACGGTGGCTCATGCCTGTAGTCCAGC.......................................................................................................................261.000.001.00------------------------------
....................................................................................................................................................................................................................................TTAGCCAGGTGTGGTGGCGCATCCCC261.000.001.00------------------------------
..............................................................................................ATTGGCCGGGCACGGTGGCTCATGCCCC................................................................................................................................281.000.00-1.00-----------------------------
..........................................................................................................CGGTGGCTCATGCCTGTAG.............................................................................................................................1901.001.00---------1.00---------------------
..........................................................................................................................................................................AGACTGAGACCATCCTGGCCGACA........................................................241.000.00-1.00-----------------------------
..................................................................................................................................................................AGGTCAGGAGACTGAGACC.....................................................................1901.001.00-----------1.00-------------------
...................................................................................................................................CACTTTGGGAGGCAGAGGCGG..................................................................................................2101.001.00---------1.00---------------------
.............................................................TTTTTATTATTCTTCTCTA..........................................................................................................................................................................191.000.00--1.00----------------------------
................................................................................................TGGCCGGGCACGGTGGCTCGGGC...................................................................................................................................231.000.00-----1.00-------------------------
..............................................................................................ATTGGCCGGGCACGGTGGCACC......................................................................................................................................221.000.00-------1.00-----------------------
............................................................................................................................................................................ACTGAGACCATCCTGGCCAACACGGC....................................................261.000.00-1.00-----------------------------
................................................................................................................................................................................AGACCATCCTGGCCAACTGCG.....................................................211.000.001.00------------------------------
....................................................................TATTCTTCTTTTTTGGTT....................................................................................................................................................................181.000.001.00------------------------------
.............................................................................................................................................................TCAGGAGGTCAGGAGAGTAG.........................................................................201.000.00-1.00-----------------------------
............................................................CTTTTTATTATTCTTCTCT...........................................................................................................................................................................191.000.00----1.00--------------------------
.................................................................TATTATTCTTCTTTTAAAT......................................................................................................................................................................191.000.00--------------------------1.00----
...............................................................................................TTGGCCGGGCACGGTGGCTCATGCCCGC...............................................................................................................................281.000.001.00------------------------------
...............................................................................................TTGGCCGGGCACGGTGGCTCATGCCCC................................................................................................................................271.000.00-1.00-----------------------------
...............................................................................................TTGGCCGGGCACGGTGGGCC.......................................................................................................................................201.000.00-1.00-----------------------------
.........................................................................................................................................GGGAGGCAGAGGCGGGCG...............................................................................................1801.001.00-----------1.00-------------------
.................................................................................................................TCATGCCTGTAGTCCAAGCACTTCGGG..............................................................................................................271.000.00-1.00-----------------------------
..................................................................................................................................................................................ACCATCCTGGCCAACATGGGG...................................................211.000.00----------------1.00--------------
...............TTTTCCAGGATCAGCATCTTCACA...................................................................................................................................................................................................................2411.001.00------1.00------------------------
................................................................................................TGGCCGGGCACGGTGGCTCATGTTCG................................................................................................................................261.000.001.00------------------------------
..........................................................................................................................................................................AGACTGAGACCATCCTGGCCAACATGCCG...................................................291.000.001.00------------------------------
.........................................................................................................................................................................................TGGCCAACATGGTGAAACGTCGAA.........................................241.000.00---------------------------1.00---
....................................................................................................................TGCCTGTAGTCCAAGCTCA...................................................................................................................191.000.00-----1.00-------------------------
.....................................................................................................................................................................TCAGGAGACTGAGACCATCCCT...............................................................221.000.00-------1.00-----------------------
..................................................................................................................................................................AGGTCAGGAGACTGAGACCATCCTGGTGA...........................................................291.000.001.00------------------------------
.......................................................................................................................................TTGGGAGGCAGAGGCGGGGGTT.............................................................................................221.000.00---------------1.00---------------
.......................................................................................................GCACGGTGGCTCATGCCTGTAGTAGC.........................................................................................................................261.000.001.00------------------------------
......................................................................................................................................TTTGGGAGGCAGAGGCGTGG................................................................................................201.000.001.00------------------------------
...............................................................................................................................................CAGAGGCGGGCGTATTG..........................................................................................171.000.00----------1.00--------------------
................................................................................................................................................................................AGACCATCCTGGCCAACAGCAG....................................................221.000.00-1.00-----------------------------
..........................................................................................................................................................................AGACTGAGACCATCCTGGCCAACGG.......................................................251.000.00-1.00-----------------------------
..............................................................................................................................................................................TGAGACCATCCTGGCCAACATGTAT...................................................251.000.00----------1.00--------------------
.................................................................................................................................AGCACTTTGGGAGGCAGAGGCGGGGGGG.............................................................................................281.000.00-1.00-----------------------------
............................................................................................................................................................................ACTGAGACCATCCTGGCCAAG.........................................................211.000.001.00------------------------------
.........................................................................................................................................................................................TGGCCAACATGGTGAAACGTCAG..........................................231.000.00----1.00--------------------------
............................................................................................................................................................................ACTGAGACCATCCTGGCCAACGGTG.....................................................251.000.001.00------------------------------
..........................................................................................................................................................................AGACTGAGACCATCCTGGCCAACGGTG.....................................................271.000.00-1.00-----------------------------
................................................................................................TGGCCGGGCACGGTGGCTCATGCTCG................................................................................................................................261.000.001.00------------------------------
.........................................................................................................................................................CGTATCAGGAGGTCAGG................................................................................1730.330.33-----------------------------0.33-
.............................................................................................................................................................TCAGGAGGTCAGGAGACTGAGACCATCCTGGC.............................................................3250.200.200.20------------------------------
............................................................................................................................................................ATCAGGAGGTCAGGAGACTGAGACC.....................................................................2560.170.17-0.17-----------------------------
.............................................................................................................TGGCTCATGCCTGTAGTCCAAGCACTTTGG...............................................................................................................3070.140.14------------------------------0.14

Antisense strand
ATTTTCTACACAGTGTTTTCCAGGATCAGCATCTTCACACACTACTAGATGTAAGTCTGTCTTTTTATTATTCTTCTTTTTTGGTGAATTGAATATTGGCCGGGCACGGTGGCTCATGCCTGTAGTCCAAGCACTTTGGGAGGCAGAGGCGGGCGTATCAGGAGGTCAGGAGACTGAGACCATCCTGGCCAACATGGTGAAACGTGGTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCGCAT
...........................................................((..(((((((...........)))))))..))...(((((((((....((((.((...((((..((((..((.(((((.....)))))))))))....))))...((((....)))))))))))))))))))..........................................................
........................................................57.............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189784SRR037935(GSM510473)
293cand3. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040023(GSM532908)
G575T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................................................................................................................TCCTGGCCAACATGGTGAAACAAAC........................................... 257.000.00---7.00---------------------------
.....................................................................................................................................................................................................................CTAAAAATACAAAAATTAGCCAGGTCCA......... 282.000.00--------2.00----------------------
.......................................................................................................GCACGGTGGCTCATGCCTGTAGTAGCC........................................................................................................................ 272.000.002.00------------------------------
....................................................................................................................................................................GTCAGGAGACTGAGACCATCAAA............................................................... 231.000.00------------1.00------------------
.........................................................................................................................................GGGAGGCAGAGGCGGGGGCC............................................................................................. 201.000.00---------------------1.00---------
.......................................................................................................................................................................................................................................GCCAGGTGTGGTGGCGGACT 201.000.00--------------------1.00----------
...............................................................................................TTGGCCGGGCACGGTGGCTCATGCCTGTCATC........................................................................................................................... 321.000.001.00------------------------------
..................................................................................................................................................................................ACCATCCTGGCCAACATGGCCG.................................................. 221.000.001.00------------------------------
......................................................................................................................................................................................TCCTGGCCAACATGGTGCGG................................................ 201.000.00-------------1.00-----------------
.............................................................................................................................................................................................................GGTCTCTACTAAAAATACAACCGT..................... 241.000.00-------------------1.00-----------
...................................................................................................CCGGGCACGGTGGCTCATGCCTGTGTC............................................................................................................................ 271.000.001.00------------------------------
.................................................................................................................................................................GAGGTCAGGAGACTGAGACTTC................................................................... 221.000.00--------------1.00----------------
...............................................................................................................GCTCATGCCTGTAGTCCAAGCACTG.................................................................................................................. 251.000.001.00------------------------------
.......................................................................................................GCACGGTGGCTCATGCCTGTAGGGT.......................................................................................................................... 251.000.00------------------------1.00------
..................................................................................................GCCGGGCACGGTGGCTCATGCCTGTAGTTGG......................................................................................................................... 311.000.001.00------------------------------
.......................................................................................................GCACGGTGGCTCATGCCTGTGGCC........................................................................................................................... 241.000.001.00------------------------------
.................................................................................................................................................................................GACCATCCTGGCCAACATCGAG................................................... 221.000.00-1.00-----------------------------
..........................................................................................................................................................................AGACTGAGACCATCCTGGCCAACAGACC.................................................... 281.000.001.00------------------------------
.......................................................................................................GCACGGTGGCTCATGCCTGTAGTAC.......................................................................................................................... 251.000.001.00------------------------------
..................................................................................................GCCGGGCACGGTGGCTCATGCCTGTGCAC........................................................................................................................... 291.000.001.00------------------------------
..............................................................................................................................................................................TGAGACCATCCTGGCCAACATCCTG................................................... 251.000.00-1.00-----------------------------
.....CTACACAGTGTTTTCCAGT.................................................................................................................................................................................................................................. 191.000.00-----------------------1.00-------
....................................................................................................................................................................................................................................TTAGCCAGGTGTGGTGGCGCATGCAG 261.000.001.00------------------------------
..........................................................GTCTTTTTATTATTCTGTA............................................................................................................................................................................. 191.000.00-----------------1.00-------------
....................................................................................................................TGCCTGTAGTCCAAGCAT.................................................................................................................... 181.000.00----------------------1.00--------
...................................................................................................................................................................................CCATCCTGGCCAACATGGTATA................................................. 221.000.00-------------------------1.00-----
...............................................................................................................GCTCATGCCTGTAGTCCAAGCATACC................................................................................................................. 261.000.00-1.00-----------------------------
................................................................................................................................................................................................................................AAAATTAGCCAGGTGTGGTGGCGCACGG 281.000.00-1.00-----------------------------
.....................................................AGTCTGTCTTTTTATTATA.................................................................................................................................................................................. 191.000.00------------------1.00------------
...................................................................................................................ATGCCTGTAGTCCAAGTTGT................................................................................................................... 201.000.00----------------------------1.00--
..................................................................................................................................................................................ACCATCCTGGCCAACAAGAG.................................................... 201.000.00-----1.00-------------------------
..............................................................................................................AGTGCTTGGACTACAGGCATGAGCC................................................................................................................... 2590.330.330.110.22-----------------------------
..........................................................................................................CTTGGACTACAGGCATGAGCCACCG....................................................................................................................... 2540.250.25-------0.25-----------------------
...........................................................................................................AGTGCTTGGACTACAGGCATGAGCCACC................................................................................................................... 2870.140.14-0.14-----------------------------
..............................................................................................................TGCTTGGACTACAGGCATGAGCC..................................................................................................................... 2390.110.11-0.11-----------------------------