ID: uc004ars.1_intron_30_0_chr9_95050193_r
GENE: IARS(2)
chr9:95050143-95050457-


(2)
AGO2.ip 		(12)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(32)
CELL-LINE 		(3)
HEART 		(4)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(13)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GGTTTCATGTTGACAGAAGATTTGGATGGGATTGCCATGGCTTACCTGTGGTATGTTTGAGTATCCAGCTTTATAATTTTCTGATTTTTTTTATAAGCATTAGATTTTGTCATATAATATGTTCAAGTATGATGAACGTTGACTGTCAGACCTTCTAGTTCATTTCTATAATATTTGTAGTTTGATTTGTTTTGTTTTCTAGAGTTGCATAGTTGCAGTTGTTTTCATAGGGCAGCGTGGTAACAGTCTTATCACAAATTTTCAGGAATATGAAATTGATAAGACACTGGGAATCAGAGGACCAGAGGATGTGGC
......................................................................................................................(((((((.......)))))))...(((..((((........(((...(((((.....)))))..)))........))))..))).................................................................................................................
......................................................................................................................119..................................................................................204.............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782SRR189785SRR038858(GSM458541)
MEL202. (cell line)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
...........................................................................................................................CAAGTATGATGAACGTTGACTGT.........................................................................................................................................................................23118.0018.00--2.00-1.003.002.00-3.00---2.00------------1.00-1.00-------1.00---1.00----------------------------1.00--------------
...........................................................................................................................CAAGTATGATGAACGTTGACTGTC........................................................................................................................................................................24115.0015.00--8.00--1.001.00-1.00---------2.00-----------------------------------------1.00-1.00--------------------
...........................................................................................................................CAAGTATGATGAACGTTGACT...........................................................................................................................................................................2119.009.00------1.00--------1.00--1.00--2.00-----------------------------------------1.00--------1.00-1.001.00-------
............................................................................................................................AAGTATGATGAACGTTGACT...........................................................................................................................................................................2015.005.00-----1.001.00-----1.00------------------------1.00----------------1.00----------------------------
....................................................................................................................................................................................................................................................................................TGATAAGACACTGGGAATCAGAGGACCAGAGGA......3314.004.00-----------------1.00----------------------------1.00------1.00-------------1.00---------------
.............................................................................................................................................................................TTTGTAGTTTGATTTGTTTTGTTTTCC...................................................................................................................274.000.004.00----------------------------------------------------------------------------------
............................................................................................................................AAGTATGATGAACGTTGACTGTC........................................................................................................................................................................2314.004.00--1.00-----2.00------1.00-------------------------------------------------------------------
.........................................................................................................................................................................................................GAGTTGCATAGTTGCAGTTGTTTTCATAGGGCAGCGTGGTAACAGTCTTATCACAAATTTTCAG..................................................6414.004.00----------4.00------------------------------------------------------------------------
.....CATGTTGACAGAAGATTTGGATG...............................................................................................................................................................................................................................................................................................2314.004.00---------1.00---------2.00----------------1.00----------------------------------------------
.............................................................................................................................................................................................................................................................................................ACTGGGAATCAGAGGACCAG..........2013.003.00-------------2.00----------------1.00----------------------------------------------------
...........................................................................................................................CAAGTATGATGAACGTTGACTG..........................................................................................................................................................................2213.003.00-----2.00-----------------1.00-----------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................AGAGGACCAGAGGATGTG..1813.003.00---------1.00-------------------2.00-----------------------------------------------------
...................................................................................................................................................................................................................................................................................................AATCAGAGGACCAGAGGATGTGG.2313.003.00------------------------1.00---------1.00-----------------------1.00------------------------
...........................................................................................................................................................................................................................................................................ATATGAAATTGATAAGACACTGGGAATC....................2813.003.00-----------3.00-----------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................ATCAGAGGACCAGAGGATGTG..2113.003.00-----------------------------------1.00-------------------1.00---------------------1.00-----
..............AGAAGATTTGGATGGGAG...........................................................................................................................................................................................................................................................................................182.000.00--------------------------------2.00--------------------------------------------------
..................................................................................................................................................................................................................................................................................ATTGATAAGACACTGGGAATCAGAGGA..............2712.002.00--------------------2.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................ACTGGGAATCAGAGGACCAGAGGATGT...2712.002.00----------------------------------------------------------------------1.00--------1.00---
........................GATGGGATTGCCATGGCTTA...............................................................................................................................................................................................................................................................................2012.002.00--------------------------2.00--------------------------------------------------------
.....CATGTTGACAGAAGATTTGGATGGG.............................................................................................................................................................................................................................................................................................2512.002.00-------------------1.00----------------------1.00----------------------------------------
............................................................................................................................................................................ATTTGTAGTTTGATTTGTTTTGTTTTCT...................................................................................................................2812.002.002.00----------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................ATCAGAGGACCAGAGGATGTGG.2212.002.00-----1.00-----------------1.00-----------------------------------------------------------
.......................................................................................................................................ACGTTGACTGTCAGACCTTCCAG.............................................................................................................................................................232.000.002.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................AGGACCAGAGGATGTGGCG192.000.00----2.00------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................GGGAATCAGAGGACCAGAGG.......2012.002.00-------2.00---------------------------------------------------------------------------
............................................................................................................................................................................ATTTGTAGTTTGATTTGTTTTGTTTCCT...................................................................................................................282.000.00-2.00---------------------------------------------------------------------------------
...............GAAGATTTGGATGGGATTGCCATGGCTTACC.............................................................................................................................................................................................................................................................................3112.002.00---2.00-------------------------------------------------------------------------------
...............GAAGATTTGGATGGGATTGCCATGGCT.................................................................................................................................................................................................................................................................................2712.002.00---2.00-------------------------------------------------------------------------------
..................................................................AGCTTTATAATTTTCTGATTTTTTTTACAA...........................................................................................................................................................................................................................302.000.00-2.00---------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................AGAGGACCAGAGGATGTGGC2012.002.00-------------2.00---------------------------------------------------------------------
....................................................................CTTTATAATTTTCTGATTTTTTTTATAAGCATT......................................................................................................................................................................................................................3312.002.00--------------2.00--------------------------------------------------------------------
............................................................................................................................................................................ATTTGTAGTTTGATTTGTTTTGTTTCC....................................................................................................................272.000.00-2.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................GGGAATCAGAGGACCAGA.........1812.002.00---------------------------------1.00--------------1.00----------------------------------
..............................................................................................................................................................................TTGTAGTTTGATTTGTTTTGTTTCCT...................................................................................................................262.000.00-2.00---------------------------------------------------------------------------------
..........................................................................................................................................................................ATATTTGTAGTTTGATTTGTTTTGTTTCCT...................................................................................................................302.000.00-2.00---------------------------------------------------------------------------------
.....CATGTTGACAGAAGATTTGGATGGGTTT..........................................................................................................................................................................................................................................................................................2812.002.00----------------------2.00------------------------------------------------------------
................................................................................................................................................................................................................................................................................................GGGAATCAGAGGACCAGAGGA......2111.001.00----------------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................................................................................AATTGATAAGACACTGGGAATCAGAGGACC............3011.001.00---1.00-------------------------------------------------------------------------------
................AAGATTTGGATGGGAGAC.........................................................................................................................................................................................................................................................................................181.000.00------------------------------------1.00----------------------------------------------
.............................................................................................................................................................................TTTGTAGTTTGATTTGTTTTGTTTCCT...................................................................................................................271.000.00-1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................AAATTGATAAGACACTGGGAATCAGAGGACCAGAGGATGTT..411.000.00----------1.00------------------------------------------------------------------------
..................GATTTGGATGGGATTGC........................................................................................................................................................................................................................................................................................1711.001.00---------------------------------------------------------------------1.00-------------
...........................................................................................................................................................................TATTTGTAGTTTGATTTGTTTTGTCTTC....................................................................................................................281.000.00-1.00---------------------------------------------------------------------------------
......................................................................................................................................AACGTTGACTGTCAGACCTTCTAGTTCATTCCT....................................................................................................................................................331.000.00-1.00---------------------------------------------------------------------------------
..............AGAAGATTTGGATGGGATTGC........................................................................................................................................................................................................................................................................................2111.001.00------------------------1.00----------------------------------------------------------
.................................................................................................................................................................................TAGTTTGATTTGTTTTGTTTCCT...................................................................................................................231.000.001.00----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................AATTGATAAGACACTGGGAATCAGAGGAC.............2911.001.00----------------------------1.00------------------------------------------------------
........................................................................................................................................................................................................................................................................GGAATATGAAATTGATAAGACACTGGGAATCAGAGG...............3611.001.00---1.00-------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................CACTGGGAATCAGAGGACCATA.........221.000.00----------------------------------------------------------------1.00------------------
.............................................................................................................................................................................TTTGTAGTTTGATTTGTTTTGTTTCC....................................................................................................................261.000.001.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................AGACACTGGGAATCAGAGGACCAGAGGACG....301.000.001.00----------------------------------------------------------------------------------
..............................................................ATCCAGCTTTATAATAG............................................................................................................................................................................................................................................171.000.00----------------1.00------------------------------------------------------------------
...........................................................................................................................CAAGTATGATGAACGTTGACTGTA........................................................................................................................................................................2411.0018.00---------------------1.00-------------------------------------------------------------
................................................................................................................................................................................................................................................................................AAATTGATAAGACACTGGGAA......................2111.001.00------------------------------1.00----------------------------------------------------
................................................................................................................................ATGATGAACGTTGACTGTC........................................................................................................................................................................1911.001.00--------1.00--------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................AGGACCAGAGGATGTTACC191.000.00----1.00------------------------------------------------------------------------------
..................................................................................................................................................................................AGTTTGATTTGTTTTGTTTTCC...................................................................................................................221.000.00-1.00---------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................AATATGAAATTGATAAGACACT...........................2211.001.00-----------------------------------------------------------1.00-----------------------
..............................ATTGCCATGGCTTACCTGTGGAAT.....................................................................................................................................................................................................................................................................241.000.00-------------------------------------------1.00---------------------------------------
..............................ATTGCCATGGCTTACCTGTGGA.......................................................................................................................................................................................................................................................................221.000.00-------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................ATATTTGTAGTTTGATTTGTTTTGTTTCC....................................................................................................................291.000.00-1.00---------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................ACACTGGGAATCAGAGGACCAGAGGATGTGGC3211.001.00---1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................TTTGTAGTTTGATTTGTCTTC.........................................................................................................................211.000.00-1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................AAATTGATAAGACACTGGGAATCAGA.................2611.001.00-----------------------------------------------------------------------1.00-----------
.........................................................................................................................................................................................................................................................................................AGACACTGGGAATCAGAGGACCAGAGGATGCG..3211.001.001.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................AATCAGAGGACCAGAGGA......1821.001.00---------0.50-----0.50-------------------------------------------------------------------
............................................................................................................................AAGTATGATGAACGTTGACTGTCAGACC...................................................................................................................................................................2811.001.00-------------------------------------------------1.00---------------------------------
.......................................................................................................................................................................................................................................................................................TAAGACACTGGGAATCAGAGGACCAGAGGATGT...3311.001.00-----------------1.00-----------------------------------------------------------------
.......................GGATGGGATTGCCATGGCTTACCTGTGGAATA....................................................................................................................................................................................................................................................................321.000.00---1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................ATATTTGTAGTTTGATTTGTTTTGTTCTCT...................................................................................................................301.000.001.00----------------------------------------------------------------------------------
..............AGAAGATTTGGATGGGATTG.........................................................................................................................................................................................................................................................................................2011.001.00----1.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................TTGATAAGACACTGGGAATCAGAGGAC.............2711.001.00-----------------1.00-----------------------------------------------------------------
..............................................................................................................................................................................TTGTAGTTTGATTTGTTTTGTTTTCCAG.................................................................................................................281.000.001.00----------------------------------------------------------------------------------
....TCATGTTGACAGAAGATA.....................................................................................................................................................................................................................................................................................................181.000.00---------1.00-------------------------------------------------------------------------
..............AGAAGATTTGGATGGGATTGCC.......................................................................................................................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------1.00----
..........................................................................................................................................................................................................AGTTGCATAGTTGCACTAC..............................................................................................191.000.00--------------------------------------------1.00--------------------------------------
............................................................................................................................................................................................................................................................................................CACTGGGAATCAGAGGACCAGAGGAT.....2611.001.00-----------1.00-----------------------------------------------------------------------
..........................................................................................................................................................................................................................TTGTTTTCATAGGGCAGCGGT............................................................................211.000.00-1.00---------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................CAGAGGACCAGAGGATGTGG.2011.001.00--------------------------------------------------1.00--------------------------------
..............................................................................................................................................................................TTGTAGTTTGATTTGTTTTGTTTCC....................................................................................................................251.000.00-1.00---------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................AATATGAAATTGATAAGACACTGGGAA......................2711.001.00-------1.00---------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................TGAAATTGATAAGACACTGGGAATCAGAGGACCAGAGGATGTG..4311.001.00------------------------------------------------------------------1.00----------------
............ACAGAAGATTTGGATGGGA............................................................................................................................................................................................................................................................................................1911.001.00---------1.00-------------------------------------------------------------------------
.......................GGATGGGATTGCCATGGCT.................................................................................................................................................................................................................................................................................1911.001.00---------------1.00-------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................AAGACACTGGGAATCAGAGGACCAGAC........271.000.00---------------------------------------------------1.00-------------------------------
...............GAAGATTTGGATGGGATTGCC.......................................................................................................................................................................................................................................................................................2111.001.00-------------------------------1.00---------------------------------------------------
...........................................................................................................................................................................................................................................................................................ACACTGGGAATCAGAGGACCA...........2111.001.00-------------------------------------------------------------1.00---------------------
.........TTGACAGAAGATTTGGATGGGATTGCCATGGC..................................................................................................................................................................................................................................................................................3211.001.00-1.00---------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TTGTTTTCATAGGGCAGTC..............................................................................191.000.001.00----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................ATTGATAAGACACTGGGA.......................1821.001.00-------1.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................ATCAGAGGACCAGAGGATGTGGC2311.001.00-----------1.00-----------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................GGAATCAGAGGACCAGAGGATGTGG.2511.001.00-----------------------1.00-----------------------------------------------------------
....................................................................................TTTTTTTTATAAGCATTTCTC..................................................................................................................................................................................................................211.000.00--------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................GATAAGACACTGGGAATCA...................1911.001.00---------1.00-------------------------------------------------------------------------
...............................................................................................................................................................................TGTAGTTTGATTTGTCCGC.........................................................................................................................191.000.00-1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GAATCAGAGGACCAGAGGATGT...2211.001.00-------1.00---------------------------------------------------------------------------
.......TGTTGACAGAAGATTTGGATA...............................................................................................................................................................................................................................................................................................211.000.00--------------------------------------1.00--------------------------------------------
.....................................................................................................................................................................................................................................................................................................TCAGAGGACCAGAGGATGTGG.2111.001.00-------------------------------------------------------------------------1.00---------
...........................................................................................................................CAAGTATGATGAACGTTGCCTG..........................................................................................................................................................................221.000.00------1.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................AGAGGACCAGAGGATGTGG.1911.001.00----1.00------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................AAGACACTGGGAATCAGAGGACCAGAGGA......2911.001.00---------------------------------1.00-------------------------------------------------
................................................................................................................................................................................................................................................................................AAATTGATAAGACACTGGGA.......................2011.001.00---------------------------------------------1.00-------------------------------------
.......TGTTGACAGAAGATTTGGATG...............................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------1.00--
.........................................................................................................................................................................................................................................................................................AGACACTGGGAATCAGAGGACCAGAGGATG....3011.001.001.00----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................AACAGTCTTATCACAAATTTTCA...................................................2311.001.00--------------------------------------------------------1.00--------------------------
...................................................................................................................................................................................................................................................................................................AATCAGAGGACCAGAGGATGT...2111.001.00------------------------1.00----------------------------------------------------------
..........................TGGGATTGCCATGGCTTAC..............................................................................................................................................................................................................................................................................1911.001.00---1.00-------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CATAGGGCAGCGTGGTAACAG.....................................................................2111.001.00----------------------------------------------------1.00------------------------------
......................................................................................................................................................................................................................................................................................................CAGAGGACCAGAGGATGTGGCCAAT251.000.00-------1.00---------------------------------------------------------------------------
............................................................................................................................AAGTATGATGAACGTTGACTG..........................................................................................................................................................................2111.001.00------------1.00----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................ATAAGACACTGGGAATCAGAGGA..............2311.001.00-------------------------1.00---------------------------------------------------------
...............................................................................................................................................................................TGTAGTTTGATTTGTTTTGTTCTCT...................................................................................................................251.000.001.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTCATAGGGCAGCGTGGTAACAGTC...................................................................2511.001.001.00----------------------------------------------------------------------------------
..............................................................................................................................................................................TTGTAGTTTGATTTGCCTA..........................................................................................................................191.000.00--------------1.00--------------------------------------------------------------------
................................................................................................................................................................................................TGTTTTCTAGAGTTGGGG.........................................................................................................181.000.001.00----------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................TATGAAATTGATAAGACACTGG.........................2211.001.00--------------------1.00--------------------------------------------------------------
................................................................................................................................................................................................................................................................................................GGGAATCAGAGGACCAGAGGATGTGGGCA291.000.00-------------------------1.00---------------------------------------------------------
............................................................................................................................AAGTATGATGAACGTTGAC............................................................................................................................................................................1911.001.00-------------------------------------1.00---------------------------------------------
....................................................................................................................................................................................................................................................................................TGATAAGACACTGGGAATCAGA.................2211.001.00-----------------------------------------------1.00-----------------------------------
.....................................................................................................................................................................................................................................................................................................TCAGAGGACCAGAGGATGTGGCA231.000.00----------------------------------1.00------------------------------------------------
................................................................................................................................ATGATGAACGTTGACTGT.........................................................................................................................................................................1811.001.00--1.00--------------------------------------------------------------------------------
.................................................................................................................................................................................TAGTTTGATTTGTTTTGTTTTCTAGAGTCGC...........................................................................................................311.000.00-1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................ATTGATAAGACACTGGGAATCAGAGGACCAGAG........3311.001.00--1.00--------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................CTGGGAATCAGAGGACCAG..........1911.001.00----------------------------------------1.00------------------------------------------
................................................................................................................................................................................................................................................................................................GGGAATCAGAGGACCAGAGGATGTGGG271.000.00---------------------------1.00-------------------------------------------------------
................................................................................................................................................................................................................................................................................................GGGAATCAGAGGACCAGAG........1911.001.00-----------------------------------------------------------------1.00-----------------
...............................................................................................................................................................................TGTAGTTTGATTTGTTTTGTTTTCCAG.................................................................................................................271.000.00-1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................TCAGAGGACCAGAGGATGTGGGC2311.001.001.00----------------------------------------------------------------------------------
.................................................................................................................................................................................TAGTTTGATTTGTTTTGTTTTCTAGAG...............................................................................................................2711.001.001.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TGGGAATCAGAGGACCAGA.........1911.001.00-----------------------------------------1.00-----------------------------------------
.....................................................................................................................................................................................................................................................................................GATAAGACACTGGGAATCAGAGGACC............2611.001.00----------------------------1.00------------------------------------------------------
..........................................................................................................................................................................ATATTTGTAGTTTGATTTGTTTTGTTCCCT...................................................................................................................301.000.001.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TGGGAATCAGAGGACCAGAGGATGT...2511.001.00-------------------------------1.00---------------------------------------------------
.......................GGATGGGATTGCCATGGCTT................................................................................................................................................................................................................................................................................2011.001.00------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................AGTTTGATTTGTTTTGTTTTCTAGAGCTG............................................................................................................291.000.00-1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TAGGGCAGCGTGGTAACAGCC...................................................................211.000.001.00----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................GAGGACCAGAGGATGTGGC1911.001.00----1.00------------------------------------------------------------------------------
............................................................................................................................AAGTATGATGAACGTTGACTGT.........................................................................................................................................................................2211.001.00--1.00--------------------------------------------------------------------------------
...............GAAGATTTGGATGGGATT..........................................................................................................................................................................................................................................................................................1811.001.00--------------------------------------1.00--------------------------------------------
..........................TGGGATTGCCATGGCTTACC.............................................................................................................................................................................................................................................................................2011.001.00----1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................GAAATTGATAAGACACTGGGAATCAGA.................2711.001.00----------------------------------------------------------------------------1.00------
..............................................................................................................................................................................................................................TTTCATAGGGCAGCGTGGTAACAGTC...................................................................2611.001.001.00----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................AAGACACTGGGAATCAGA.................1830.670.67---------------------------0.33-----------------------------------------------------0.33-
........................................................................................................................................................................................................................................................................................................GAGGACCAGAGGATGTGG.1820.500.50---------0.50-------------------------------------------------------------------------
........GTTGACAGAAGATTTGGAT................................................................................................................................................................................................................................................................................................1920.500.50--------------------------0.50--------------------------------------------------------
..........................TGGGATTGCCATGGCT.................................................................................................................................................................................................................................................................................1630.330.33---------------------------------------0.33-------------------------------------------
......................................GGCTTACCTGTGGTA......................................................................................................................................................................................................................................................................1550.200.20----------------------------------------------------------------------------------0.20

Antisense strand
GGTTTCATGTTGACAGAAGATTTGGATGGGATTGCCATGGCTTACCTGTGGTATGTTTGAGTATCCAGCTTTATAATTTTCTGATTTTTTTTATAAGCATTAGATTTTGTCATATAATATGTTCAAGTATGATGAACGTTGACTGTCAGACCTTCTAGTTCATTTCTATAATATTTGTAGTTTGATTTGTTTTGTTTTCTAGAGTTGCATAGTTGCAGTTGTTTTCATAGGGCAGCGTGGTAACAGTCTTATCACAAATTTTCAGGAATATGAAATTGATAAGACACTGGGAATCAGAGGACCAGAGGATGTGGC
......................................................................................................................(((((((.......)))))))...(((..((((........(((...(((((.....)))))..)))........))))..))).................................................................................................................
......................................................................................................................119..................................................................................204.............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782SRR189785SRR038858(GSM458541)
MEL202. (cell line)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
...........................GGGATTGCCATGGCTTGGA............................................................................................................................................................................................................................................................................. 191.000.00---------------------------------------------------------1.00-------------------------
.......................................................................................................................................................................................................................................................................AGGAATATGAAATTGACAT................................. 191.000.00----------------1.00------------------------------------------------------------------
..........................................................................................................................................................................................................AGTTGCATAGTTGCAGTAAAA............................................................................................ 211.000.00----------------1.00------------------------------------------------------------------