ID: uc003zcs.1_intron_8_0_chr8_145652363_r.5p
GENE: VPS28(1)
chr8:145653672-145653921-


(1)
AGO2.ip
(3)
B-CELL
(2)
BRAIN
(16)
BREAST
(17)
CELL-LINE
(7)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(2)
HELA
(1)
KIDNEY
(6)
LIVER
(1)
OTHER
(27)
SKIN
(1)
XRN.ip

Sense strand
CCGAGCGCACCCCGCCCCCGGCGCCATCTTCCCGACCGCGAGCCGTCCAGGTACCCGGGGCCCGGCCGGTGGGCGGGGAAGGGGCAGAGTGGGGAGAGGCGACTCAGGGCCTGGCACCCTCTGGGCGCGCCTAGGCCCCGGCACAGCTTCGGCTGAGCGCCGCAAAAGTCACGTTATTGGCATGTTCTAGAAACTGGCTTTCCTTGCTCGTTGTCCACTCTGCGAGGTTGTTTTGCACATTTGCTTGTGG
...............................................................................................(((....))).(((((((((.(((...)))...))).))))))((((.((((....))))...))))........................................................................................
..............................................................................................95............................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577745(Rovira)
total RNA. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040017(GSM532902)
G645T. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR189784GSM532877(GSM532877)
G691N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR038855(GSM458538)
D10. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................CGACTCAGGGCCTGGCAC.....................................................................................................................................1818.008.008.00---------------------------------------------------------------------------------------
........................................................................................................................................................CTGAGCGCCGCAAAAGT.................................................................................1715.005.005.00---------------------------------------------------------------------------------------
............................................GTCCAGGTACCCGGGGC.............................................................................................................................................................................................1714.004.00-----1.00----1.00-----------------------------------1.00--------------------1.00--------------------
...........................................CGTCCAGGTACCCGGGGC.............................................................................................................................................................................................1813.003.002.00--------------------------------------1.00------------------------------------------------
..............................................................CGGCCGGTGGGCGGGGAAGGG.......................................................................................................................................................................2113.003.00--------3.00-------------------------------------------------------------------------------
..........................................CCGTCCAGGTACCCGGG...............................................................................................................................................................................................1712.002.00--1.00---1.00---------------------------------------------------------------------------------
..........................................................................................................GGGCCTGGCACCCTCTGGGC............................................................................................................................2012.002.00-----2.00----------------------------------------------------------------------------------
.................................................................................................GGCGACTCAGGGCCTGGCACCCT..................................................................................................................................2312.002.00---------2.00------------------------------------------------------------------------------
.............................................................................GAAGGGGCAGAGTGGGATTT.........................................................................................................................................................202.000.00-2.00--------------------------------------------------------------------------------------
........................................................................................................CAGGGCCTGGCACCCTCTGG..............................................................................................................................2012.002.002.00---------------------------------------------------------------------------------------
.................................GACCGCGAGCCGTCCAGG.......................................................................................................................................................................................................1812.002.00-------------------2.00--------------------------------------------------------------------
..................................................................CGGTGGGCGGGGAAGGGGCAG...................................................................................................................................................................2112.002.00-----------------1.00---1.00------------------------------------------------------------------
..............................................................................................................................................ACAGCTTCGGCTGAGCGCCGC.......................................................................................2112.002.00-2.00--------------------------------------------------------------------------------------
.........................................................................................................AGGGCCTGGCACCCTCTGGGC............................................................................................................................2112.002.00----2.00-----------------------------------------------------------------------------------
.............................................................CCGGCCGGTGGGCGGGGAAGGGGCAGAGTG...............................................................................................................................................................3012.002.00--2.00-------------------------------------------------------------------------------------
..........................................................................................................................................................................................CTAGAAACTGGCTTTCCT..............................................1812.002.00-------2.00--------------------------------------------------------------------------------
..........................................................................................................GGGCCTGGCACCCTCTGGGCGCGC........................................................................................................................2411.001.00--------------------------------------------1.00-------------------------------------------
..........................................................................................................................................................................................CTAGAAACTGGCTTTCCTT.............................................1911.001.00------------------------------------------------------1.00---------------------------------
.................................................................................................GGCGACTCAGGGCCTGGCACC....................................................................................................................................2111.001.00-1.00--------------------------------------------------------------------------------------
..............................CCCGACCGCGAGCCGTCCAGGTCTC...................................................................................................................................................................................................251.000.00-----------------------------------------------------------------------1.00----------------
...................................................................................................................ACCCTCTGGGCGCGCCTAGGCCCC...............................................................................................................2411.001.00----------------1.00-----------------------------------------------------------------------
.........CCCCGCCCCCGGCGCCGGCG.............................................................................................................................................................................................................................201.000.00-------------1.00--------------------------------------------------------------------------
................................................AGGTACCCGGGGCCCGGC........................................................................................................................................................................................1811.001.00----------------------------------------------------------------------1.00-----------------
.............................................................................GAAGGGGCAGAGTGGGAATT.........................................................................................................................................................201.000.00-----------------------------------1.00----------------------------------------------------
......GCACCCCGCCCCCGGCGC..................................................................................................................................................................................................................................1811.001.00---------------------------------------------------1.00------------------------------------
.................................................................CCGGTGGGCGGGGAAGGGGCAG...................................................................................................................................................................2211.001.00---------------------------------1.00------------------------------------------------------
.........................................................................................................AGGGCCTGGCACCCTCTGG..............................................................................................................................1911.001.00---------------1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................TCGTTGTCCACTCTGCGAGGTTGTTTTG...............2811.001.00----------------------1.00-----------------------------------------------------------------
.....CGCACCCCGCCCCCGGAGC..................................................................................................................................................................................................................................191.000.00------------1.00---------------------------------------------------------------------------
.............................................................................................................................................................................................................GCTCGTTGTCCACTCTGCGAGGTT.....................2411.001.00----------------------------------------------------------1.00-----------------------------
......................................................................................GAGTGGGGAGAGGCGCC...................................................................................................................................................171.000.00-------------------------------------------------------------1.00--------------------------
.........................................................................CGGGGAAGGGGCAGAGTGGG.............................................................................................................................................................2011.001.00---------------------------1.00------------------------------------------------------------
..............................................................................................AGAGGCGACTCAGGGCCTG.........................................................................................................................................1911.001.00-----------------------------1.00----------------------------------------------------------
..............................................................................AAGGGGCAGAGTGGGGAG..........................................................................................................................................................1811.001.00-----------------------------------------1.00----------------------------------------------
..................................................................................................GCGACTCAGGGCCTGGCAC.....................................................................................................................................1911.001.00-------------------------1.00--------------------------------------------------------------
.....................................................................................................................................................................................................CTTTCCTTGCTCGTTGTCCACTCTGC...........................2611.001.00-------------------------------------1.00--------------------------------------------------
..........................................................................................GGGGAGAGGCGACTCAGGGCCT..........................................................................................................................................2211.001.00----------------------------------------1.00-----------------------------------------------
........ACCCCGCCCCCGGCGCGA................................................................................................................................................................................................................................181.000.00----------------------------------------------------------------1.00-----------------------
...........................................CGTCCAGGTACCCGG................................................................................................................................................................................................1511.001.00------------------1.00---------------------------------------------------------------------
...................................................................................................CGACTCAGGGCCTGGCACCCTCTG...............................................................................................................................2411.001.00-------------------------------------------------------------------------1.00--------------
............CGCCCCCGGCGCCATCTTCCCGACCGCGAGC...............................................................................................................................................................................................................3111.001.00---1.00------------------------------------------------------------------------------------
........................................................................................................CAGGGCCTGGCACCCTCTGGG.............................................................................................................................2111.001.00----------------------------------1.00-----------------------------------------------------
......................................................................................................................................................................................................TTTCCTTGCTCGTTGTCCACTCTGCGAGGTC.....................311.000.00------------------1.00---------------------------------------------------------------------
......................................................................................................................................................................................................TTTCCTTGCTCGTTGTCCACTCTGC...........................2511.001.00------------------------------------------------1.00---------------------------------------
..........................................................................................................................................CGGCACAGCTTCGGCTG...............................................................................................1711.001.00--1.00-------------------------------------------------------------------------------------
..................................ACCGCGAGCCGTCCAGG.......................................................................................................................................................................................................1711.001.00---1.00------------------------------------------------------------------------------------
..........................................................................................GGGGAGAGGCGACTCAGGGC............................................................................................................................................2011.001.00------------------------------------------1.00---------------------------------------------
........ACCCCGCCCCCGGCGCGACC..............................................................................................................................................................................................................................201.000.00--------------------------------------------------------1.00-------------------------------
.........CCCCGCCCCCGGCGCCTCGC.............................................................................................................................................................................................................................201.000.00--------------------------1.00-------------------------------------------------------------
..............................................................CGGCCGGTGGGCGGGGAAGGGGCAGAGTAAA.............................................................................................................................................................311.000.00----------------------------1.00-----------------------------------------------------------
............................................................CCCGGCCGGTGGGCGGGC............................................................................................................................................................................181.000.00------------------------1.00---------------------------------------------------------------
....................................CGCGAGCCGTCCAGGTACCCGGGGC.............................................................................................................................................................................................2511.001.00---1.00------------------------------------------------------------------------------------
..........................................................................................................GGGCCTGGCACCCTCTGGG.............................................................................................................................1911.001.00---------------1.00------------------------------------------------------------------------
...................................................................GGTGGGCGGGGAAGGGGCAG...................................................................................................................................................................2011.001.00--------------------------------1.00-------------------------------------------------------
.........................................GCCGTCCAGGTACCCGG................................................................................................................................................................................................1711.001.00-----------------------------------------------------------1.00----------------------------
........ACCCCGCCCCCGGCGCAC................................................................................................................................................................................................................................181.000.00------------------------------------------------------------1.00---------------------------
...............................................................................................................TGGCACCCTCTGGGCGCGCC.......................................................................................................................2011.001.00------------------------------------------------------------------------1.00---------------
............................................GTCCAGGTACCCGGGGCC............................................................................................................................................................................................1811.001.00------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................................................TCTAGAAACTGGCTTTCCT..............................................1911.001.00----------1.00-----------------------------------------------------------------------------
........................................AGCCGTCCAGGTACCCGGGGC.............................................................................................................................................................................................2111.001.00-------1.00--------------------------------------------------------------------------------
.................................................................CCGGTGGGCGGGGAAGGGG......................................................................................................................................................................1911.001.00---------------------------------------------------------------------1.00------------------
.........CCCCGCCCCCGGCGCCAC...............................................................................................................................................................................................................................181.000.00-------------------------------1.00--------------------------------------------------------
.............................................................CCGGCCGGTGGGCGGGGAAGGGGCA....................................................................................................................................................................2511.001.00-1.00--------------------------------------------------------------------------------------
...........................................CGTCCAGGTACCCGGGGCC............................................................................................................................................................................................1911.001.00--------------------------------------------------------------------------1.00-------------
...............CCCCGGCGCCATCTTCCCGACCGCGAGC...............................................................................................................................................................................................................2811.001.00-------------------------------------------1.00--------------------------------------------
...........................................................................................GGGAGAGGCGACTCAGGG.............................................................................................................................................1811.001.00---------1.00------------------------------------------------------------------------------
..........................................................................................................................................................GAGCGCCGCAAAAGTCACG.............................................................................1911.001.00----1.00-----------------------------------------------------------------------------------
..............................................................................................AGAGGCGACTCAGGGCCTGG........................................................................................................................................2011.001.00-----------------1.00----------------------------------------------------------------------
........ACCCCGCCCCCGGCGCCACCG.............................................................................................................................................................................................................................211.000.00---------------------------------------------------------------1.00------------------------
...............................................................................................................TGGCACCCTCTGGGCTAG.........................................................................................................................181.000.00--------------------------------------------------------------1.00-------------------------
.........................ATCTTCCCGACCGCGAGCCGTCCA.........................................................................................................................................................................................................2411.001.00--------------------1.00-------------------------------------------------------------------
..................CGGCGCCATCTTCCCGAC......................................................................................................................................................................................................................1820.500.50----------------------------------------------------------------------------0.50-----------
............................................................................................................GCCTGGCACCCTCTGGGC............................................................................................................................1820.500.50-----0.50----------------------------------------------------------------------------------
.............................................................CCGGCCGGTGGGCGGG.............................................................................................................................................................................1640.500.50----------0.25---------------------------------------------------------------------0.25-------
....................................................................................................................................................................................................................GTCCACTCTGCGAGGT......................1620.500.50-----------0.50----------------------------------------------------------------------------
............................................................CCCGGCCGGTGGGCGG..............................................................................................................................................................................1620.500.50-----------------------------------------------------------------------------0.50----------
.....................................................................TGGGCGGGGAAGGGGCAGAG.................................................................................................................................................................2020.500.50----------0.50-----------------------------------------------------------------------------
............................................................CCCGGCCGGTGGGCG...............................................................................................................................................................................1540.500.50------------------------------------0.50---------------------------------------------------
.............................................................................................................................CGCGCCTAGGCCCCGGC............................................................................................................1720.500.50--0.50-------------------------------------------------------------------------------------
..............................................................CGGCCGGTGGGCGGGCGC..........................................................................................................................................................................1890.440.11--------------0.11------0.11----0.110.11------------------------------------------------------------
...................................................................................................CGACTCAGGGCCTGG........................................................................................................................................1530.330.33-------------------------------------------------------------------------------0.33--------
......GCACCCCGCCCCCGGC....................................................................................................................................................................................................................................1660.330.33-------------------------0.17--------------------------------------------------------0.17-----
..............................................................................................................CTGGCACCCTCTGGGC............................................................................................................................1640.250.25---0.25------------------------------------------------------------------------------------
.............................................................CCGGCCGGTGGGCGGGCGCC.........................................................................................................................................................................2040.250.50--------------------0.25-------------------------------------------------------------------
..............................................................CGGCCGGTGGGCGGG.............................................................................................................................................................................1590.110.11-----------------------------------------------------------------------------------0.11----
..............................................................CGGCCGGTGGGCGGGCGCA.........................................................................................................................................................................1990.110.11--------------------------------------------------------------------------------------0.11-
..............................................................CGGCCGGTGGGCGGGCGCT.........................................................................................................................................................................1990.110.11------------------------------------------------------------------------------------0.11---

Antisense strand
CCGAGCGCACCCCGCCCCCGGCGCCATCTTCCCGACCGCGAGCCGTCCAGGTACCCGGGGCCCGGCCGGTGGGCGGGGAAGGGGCAGAGTGGGGAGAGGCGACTCAGGGCCTGGCACCCTCTGGGCGCGCCTAGGCCCCGGCACAGCTTCGGCTGAGCGCCGCAAAAGTCACGTTATTGGCATGTTCTAGAAACTGGCTTTCCTTGCTCGTTGTCCACTCTGCGAGGTTGTTTTGCACATTTGCTTGTGG
...............................................................................................(((....))).(((((((((.(((...)))...))).))))))((((.((((....))))...))))........................................................................................
..............................................................................................95............................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577745(Rovira)
total RNA. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040017(GSM532902)
G645T. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR189784GSM532877(GSM532877)
G691N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR038855(GSM458538)
D10. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................................................................................................................GTGGACAACGAGCAAGGAAAGCCA................................ 2412.002.00---------------------------------------------1.00-----------1.00------------------------------
.....................................................ACCGGCCGGGCCCCGGG.................................................................................................................................................................................... 1712.002.00---2.00------------------------------------------------------------------------------------
........................................................GGGGCCCGGCCGGTGCGCC............................................................................................................................................................................... 192.000.00-----------1.00--------0.50------------------------------------------------------0.50------------
..................GTCGGGAAGATGGCGCCG...................................................................................................................................................................................................................... 1822.002.00------------0.50--------0.50----------------1.00-------------------------------------------------
.....CGCACCCCGCCCCCGGGT................................................................................................................................................................................................................................... 181.000.00--------------------------------------------------------------------1.00-------------------
...AGCGCACCCCGCCCCCTC..................................................................................................................................................................................................................................... 181.000.00--------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................ACGTGACTTTTGCGGCGCT............................................................................ 1911.001.00----1.00-----------------------------------------------------------------------------------
........................................................GGGGCCCGGCCGGTGCGC................................................................................................................................................................................ 181.000.00-----------0.50-0.50--------------------------------------------------------------------------
...........................TGGACGGCTCGCGGTCGGGAAG......................................................................................................................................................................................................... 2211.001.00----------------1.00-----------------------------------------------------------------------
....................................................................................................................................................................................................GTGGACAACGAGCAAGGAAAGC................................ 2211.001.00----------------------------------------------------1.00-----------------------------------
...........................................................................................................................................................................................................CTCGCAGAGTGGACAACGAGCAA........................ 2311.001.00--------------------------------------------------1.00-------------------------------------
................................................................................................AGGCGACTCAGGGCCGG......................................................................................................................................... 171.000.00------------------------------------------------------------------1.00---------------------
..............................................................................AAGGGGCAGAGTGGGGAGGCC....................................................................................................................................................... 211.000.00-----------------------------------------------1.00----------------------------------------
........................................................GGGGCCCGGCCGGTGGCGC............................................................................................................................................................................... 191.000.00------1.00---------------------------------------------------------------------------------
.....................CGCCATCTTCCCGACGAC................................................................................................................................................................................................................... 181.000.00-----------------------1.00----------------------------------------------------------------
.........................................................................................................................CGAAGCTGTGCCGGGGCCTAGGCGCGCCCA................................................................................................... 3011.001.00------1.00---------------------------------------------------------------------------------
................CCCGGCGCCATCTTCAGG........................................................................................................................................................................................................................ 181.000.00-----------------------------------------------------------------1.00----------------------
..GAGCGCACCCCGCCCCCT...................................................................................................................................................................................................................................... 181.000.00--------------1.00-------------------------------------------------------------------------
...............................................................................................................................................................................................................................GAGGTTGTTTTGCACAACAC....... 201.000.00------------------------------1.00---------------------------------------------------------
.........................ATCTTCCCGACCGCGAGCCGTCCT......................................................................................................................................................................................................... 241.000.00-----------------------------------------------------1.00----------------------------------
..........................................................................................................GGGCCTGGCACCCTCTGTA............................................................................................................................. 191.000.00-------------------------------------------------1.00--------------------------------------
...........................................................GCCCGGCCGGTGGGCGGGGCGC......................................................................................................................................................................... 221.000.00-------------1.00--------------------------------------------------------------------------
.....................GCGGTCGGGAAGATGGCG................................................................................................................................................................................................................... 1811.001.00-------------------------------------------------------1.00--------------------------------
.....................CTCGCGGTCGGGAAGATGGCG................................................................................................................................................................................................................ 2111.001.00--1.00-------------------------------------------------------------------------------------
....................GTCGGGAAGATGGCGC...................................................................................................................................................................................................................... 1630.670.67-----------------------0.33------------------------------------------------------0.33---------
........................................................CACCGGCCGGGCCCC................................................................................................................................................................................... 1520.500.50------------------------------------0.50---------------------------------------------------
........................................................GGGGCCCGGCCGGTGC.................................................................................................................................................................................. 160.500.00-----------0.50----------------------------------------------------------------------------
..................CGGCGCCATCTTCCCGACCCGA.................................................................................................................................................................................................................. 2220.500.00----------------------0.50-----------------------------------------------------------------
.....................................................CGGCCGGGCCCCGGG...................................................................................................................................................................................... 1590.440.44---------------------------------------------------------------------------------0.22---0.11-0.11
....................GCGCCATCTTCCCGACTACT.................................................................................................................................................................................................................. 200.330.00------------------------0.33---------------------------------------------------------------
.....................................................CCCGGGGCCCGGCCGGA.................................................................................................................................................................................... 170.170.00-----------0.17----------------------------------------------------------------------------
.....................................................CCGGCCGGGCCCCGGG..................................................................................................................................................................................... 1660.170.17------0.17---------------------------------------------------------------------------------
.........................................................CCACCGGCCGGGCCC.................................................................................................................................................................................. 1570.140.14------0.14---------------------------------------------------------------------------------