ID: uc003yuv.2_intron_2_0_chr8_136555014_f.3p
GENE: (3)
chr8:136560797-136561046+


(2)
BRAIN 		(1)
BREAST 		(7)
CELL-LINE 		(1)
CERVIX 		(2)
LIVER 		(2)
OTHER 		(1)
SKIN

Sense strand
GAGTGTGTGTAAAAGCCTGGGAATATCAGGATCACATTTATAGCTTAAACCTTCTTTTTTAGAGTAGTGTCTACTGTGACAACCGCTTGCCAGATGGATTGTTTTTATTTTGGGGGTTAGTTTTTATTTATTTATTTATTTATCTTTCATTTCTTATAATGACACGTTTTTAAATGTGATTTCTTTTTTCCTTTTTCCAGGAAGAAGAGTTGAGGAAAAGTGGAGAAGCGAAGTACTTCCATCTCAATGA
..................................................................................................................................................(((((......)))))((((((....))))))........................................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189785SRR189784GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR040008(GSM532893)
G727N. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................TTTTTATTTATTTATTTATTTATCTATG......................................................................................................28554.000.00264.00232.0034.0022.00--2.00---------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTATG......................................................................................................27147.000.0073.0049.0013.0012.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTTTAG...................................................................................................306.000.001.001.003.001.00------------
............................................................................................................................TATTTATTTATTTATTTATCTTAAG.....................................................................................................255.000.00-3.002.00-------------
.............................................................................................................................ATTTATTTATTTATTTATCTTTTAAG...................................................................................................265.000.00--1.003.00--1.00---------
..........................................................................................................................TTTATTTATTTATTTATTTATCTAAG......................................................................................................265.000.001.00-4.00-------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTAGAG.....................................................................................................284.000.00--3.001.00------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTACG....................................................................................................283.000.00--1.002.00------------
.............................................................................................................................ATTTATTTATTTATTTATCTTTTCAG...................................................................................................263.000.00---3.00------------
............................................................................................................................TATTTATTTATTTATTTATCTTCAG.....................................................................................................253.000.00---3.00------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTCAAG...................................................................................................293.000.002.00-1.00-------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCCAG.......................................................................................................263.000.00--3.00-------------
.............................................................................................................................ATTTATTTATTTATTTATCTAAG......................................................................................................233.000.00---2.00----1.00-------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTTCCC...................................................................................................293.000.00----1.002.00----------
........................................................................................................................TTTTTATTTATTTATTTATTTCTTG.........................................................................................................253.000.00--1.002.00------------
.............................................................................................................................ATTTATTTATTTATTTATCTTAAG.....................................................................................................243.000.00-1.00-2.00------------
..............................................................................................................................TTTATTTATTTATTTATCTTTAGGC...................................................................................................252.000.00----1.001.00----------
...........................................................................................................................TTATTTATTTATTTATTTATCCATG......................................................................................................252.000.001.00--1.00------------
........................................................................................................................TTTTTATTTATTTATTTATTTATCTAGG......................................................................................................282.000.002.00---------------
...........................................................................................................................TTATTTATTTATTTATTTATCTTCAG.....................................................................................................262.000.001.00--1.00------------
........................................................................................................................TTTTTATTTATTTATTTATTTATCTACG......................................................................................................282.000.00--1.001.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCCATG......................................................................................................272.000.00-1.00-1.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTCATTTCTTG..............................................................................................352.000.00-2.00--------------
...................................................................................................................................................................................................................GAGGAAAAGTGGAGAAGCGAAGT................2312.002.00-------2.00--------
...........................................................................................................................TTATTTATTTATTTATTTATCTTAG......................................................................................................252.000.00--1.001.00------------
..............................................................................................................................TTTATTTATTTATTTATCTTTCG.....................................................................................................232.000.00--1.001.00------------
........................................................................................................................TTTTTATTTATTTATTTATTTATCTTTGGTG...................................................................................................312.000.00-----2.00----------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTCAG.....................................................................................................282.000.00--2.00-------------
...........................................................................................................................TTATTTATTTATTTATTTATCTTTACG....................................................................................................272.000.00--2.00-------------
............................................................................................................................TATTTATTTATTTATTTATCTTTATG....................................................................................................262.000.00--2.00-------------
.............................................................................................................................ATTTATTTATTTATTTATCTTCAG.....................................................................................................242.000.00--2.00-------------
...........................................................................................................................TTATTTATTTATTTATTTATCTGACC.....................................................................................................262.000.00-----2.00----------
...........................................................................................................................TTATTTATTTATTTATTTATCTTAAG.....................................................................................................262.000.00--1.001.00------------
.............................................................................................................................ATTTATTTATTTATTTATCTTTAAG....................................................................................................252.000.00--2.00-------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCCG........................................................................................................252.000.00-1.001.00-------------
............................................................................................................................TATTTATTTATTTATTTATCTAAG......................................................................................................242.000.00--1.001.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTCG.......................................................................................................262.000.00---2.00------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTACAG...................................................................................................292.000.00--2.00-------------
........................................................................................................................TTTTTATTTATTTATTTATTTATCTTTGGAG...................................................................................................311.000.00----1.00-----------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTGAG....................................................................................................291.000.00----1.00-----------
........................................................................................................................TTTTTATTTATTTATTTATTTATACCG.......................................................................................................271.000.001.00---------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTAAG.....................................................................................................271.000.00--1.00-------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTCTTG...................................................................................................291.000.00---1.00------------
............................................................................................................................TATTTATTTATTTATTTATCCATG......................................................................................................241.000.00--1.00-------------
...............................................................................................................................TTATTTATTTATTTATCTTTGGCC...................................................................................................241.000.00-----1.00----------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTAG.....................................................................................................281.000.00---1.00------------
...............................................................................................................................TTATTTATTTATTTATCTTCG......................................................................................................211.000.00--1.00-------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTATCG.....................................................................................................281.000.00-1.00--------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTTTAT...................................................................................................301.000.00---1.00------------
...........................................................................................................................TTATTTATTTATTTATTTATCTTCG......................................................................................................251.000.00---1.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTCCG......................................................................................................271.000.00----1.00-----------
........................................................................................................................TTTTTATTTATTTATTTATTTATCCTTG......................................................................................................281.000.00---1.00------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTCG.......................................................................................................251.000.00---1.00------------
.............................................................................................................................ATTTATTTATTTATTTATCTTTTATG...................................................................................................261.000.00------1.00---------
...........................................................................................................................TTATTTATTTATTTATTTATCCTTG......................................................................................................251.000.00---1.00------------
...........................................................................................................................TTATTTATTTATTTATTTATCTAGAA.....................................................................................................261.000.00--1.00-------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTCCAG...................................................................................................291.000.00--1.00-------------
..............................................................................................................................TTTATTTATTTATTTATCTTTCACAG..................................................................................................261.000.00--1.00-------------
............................................................................................................................TATTTATTTATTTATTTATCTAGGC.....................................................................................................251.000.00----1.00-----------
...........................................................................................................................TTATTTATTTATTTATTTATCGCAG......................................................................................................251.000.00----1.00-----------
............................................................................................................................TATTTATTTATTTATTTATCTTTTCAT...................................................................................................271.000.00--1.00-------------
...........................................................................................................................TTATTTATTTATTTATTTATCTTTTTTA...................................................................................................281.000.00--1.00-------------
...........................................................................................AGATGGATTGTTTTTATTTTGGGGGTTTTT.................................................................................................................................301.000.00-----1.00----------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTATCG...................................................................................................291.000.00---1.00------------
...............................................................................................................................TTATTTATTTATTTATCTTTCG.....................................................................................................221.000.00---1.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCAG........................................................................................................251.000.00--1.00-------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTTTG....................................................................................................291.000.00--1.00-------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTAATG.....................................................................................................271.000.00--1.00-------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTCTCG.....................................................................................................271.000.00--1.00-------------
..............................................................................................................................TTTATTTATTTATTTATCCCTG......................................................................................................221.000.00--1.00-------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTCGAG...................................................................................................291.000.00------1.00---------
........................................................................................................................TTTTTATTTATTTATTTATTTATCTAG.......................................................................................................271.000.00---1.00------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTTCCG...................................................................................................291.000.00-----1.00----------
....................................................................................................................................................................................................................AGGAAAAGTGGAGAAGCG....................1811.001.00------------1.00---
........................................................................................................................TTTTTATTTATTTATTTATTTATCTTTCC.....................................................................................................291.000.00-----1.00----------
...............................................................................................................GGGGGTTAGTTTTTACT..........................................................................................................................171.000.00------1.00---------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTGGTG...................................................................................................291.000.00----1.00-----------
...........................................................................................................................TTATTTATTTATTTATTTATCTTTAAG....................................................................................................271.000.00---1.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTAATG....................................................................................................291.000.00------1.00---------
........................................................................................................................TTTTTATTTATTTATTTATTTATAG.........................................................................................................251.000.00---1.00------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTCATT...................................................................................................2911.001.001.00---------------
.............................................................................................................................ATTTATTTATTTATTTATCTTTAAAG...................................................................................................261.000.00--1.00-------------
........................................................................................................................TTTTTATTTATTTATTTATTTATCTAAAG.....................................................................................................291.000.00---1.00------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTCTTG....................................................................................................281.000.00--1.00-------------
.............................................................................................................................ATTTATTTATTTATTTATCTTTCCAG...................................................................................................261.000.00---1.00------------
..............................................................................................................................TTTATTTATTTATTTATCCATG......................................................................................................221.000.00--1.00-------------
........................................................................................................................TTTTTATTTATTTATTTATTTATCTCTA......................................................................................................281.000.00--1.00-------------
...........................................................................................................................TTATTTATTTATTTATTTATCTGGAG.....................................................................................................261.000.00-----1.00----------
...............................................................................................................................TTATTTATTTATTTATCTGTGG.....................................................................................................221.000.00----1.00-----------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTGAGG...................................................................................................301.000.00----1.00-----------
............................................................................................................................................................................AATGTGATTTCTTTTTATGT..........................................................201.000.00------1.00---------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTCG......................................................................................................271.000.00---1.00------------
........................................................................................................................TTTTTATTTATTTATTTATTTCTCG.........................................................................................................251.000.00---1.00------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTCGAG....................................................................................................281.000.00----1.00-----------
...............................................................................................................................TTATTTATTTATTTATCTTTACG....................................................................................................231.000.00--1.00-------------
...........................................................................................................................TTATTTATTTATTTATTTATCTTTTTAG...................................................................................................281.000.00--1.00-------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTCAG.....................................................................................................271.000.00--1.00-------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTCCG.....................................................................................................271.000.00---1.00------------
..................................................................................................................................................................................ATTTCTTTTTTCCTTTTTGTC...................................................211.000.00-----1.00----------
..........................................................................................................................................................................................................AGAAGAGTTGAGGAAAAGTG............................2011.001.00--------------1.00-
..........................................................................................................................................TTTATCTTTCATTTCTTTCAG...........................................................................................211.000.00---1.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTAATT...................................................................................................301.000.00---1.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTCTG.....................................................................................................281.000.00---1.00------------
...........................................................................................................................TTATTTATTTATTTATTTATCTTTCTG....................................................................................................271.000.00---1.00------------
...............................................................................................................................TTATTTATTTATTTATCTTTCTAG...................................................................................................241.000.00--1.00-------------
.................................................................................................................................ATTTATTTATTTATCTTCG......................................................................................................191.000.00---1.00------------
...........................................................................................................................TTATTTATTTATTTATTTATCTTGGG.....................................................................................................261.000.00----1.00-----------
...........................................................................................................................TTATTTATTTATTTATTTATCTTACAG....................................................................................................271.000.00--1.00-------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTCGAG.....................................................................................................271.000.00----1.00-----------
...............................................................................................................................TTATTTATTTATTTATCGACG......................................................................................................211.000.00----1.00-----------
...........................................................................................................................TTATTTATTTATTTATTTATCTAAG......................................................................................................251.000.00--1.00-------------
........................................................................................................................TTTTTATTTATTTATTTATTTATCCATG......................................................................................................281.000.00-1.00--------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTCTAG.....................................................................................................281.000.00--1.00-------------
.............................................................................................................................ATTTATTTATTTATTTATCTTTATTG...................................................................................................261.000.00---1.00------------
.............................................................................................................................ATTTATTTATTTATTTATCTGGAG.....................................................................................................241.000.00-----1.00----------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTATCA....................................................................................................291.000.00---1.00------------
...........................................................................................................................TTATTTATTTATTTATTTATCTTTATAG...................................................................................................281.000.00---1.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTCAG......................................................................................................271.000.00--1.00-------------
............................................................................................................................TATTTATTTATTTATTTATCTTTCTGAC..................................................................................................281.000.00----1.00-----------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTTAATG...................................................................................................291.000.00---1.00------------
............................................................................................................................TATTTATTTATTTATTTATCTTAG......................................................................................................241.000.00--1.00-------------
...................................................................................................................................................................................................................GAGGAAAAGTGGAGAAGCGAGGT................231.000.00-------1.00--------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTAG......................................................................................................271.000.00--1.00-------------
...........................................................................................................................TTATTTATTTATTTATTTATCTTTAGAG...................................................................................................281.000.00-----1.00----------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTCAAG...................................................................................................301.000.00---1.00------------
.............................................................................................................................ATTTATTTATTTATTTATCTTCATG....................................................................................................251.000.00-1.00--------------
.................................................................................................................................ATTTATTTATTTATCTTTCTG....................................................................................................211.000.00---1.00------------
..........................................................................................................................TTTATTTATTTATTTATTTATCTTCG......................................................................................................261.000.00--1.00-------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTTCATT...................................................................................................3011.001.001.00---------------
............................................................................................................................TATTTATTTATTTATTTATCTTTTCAG...................................................................................................271.000.00---1.00------------
........................................................................................................................TTTTTATTTATTTATTTATTTATATG........................................................................................................261.000.00---1.00------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTTCAAG....................................................................................................291.000.00--1.00-------------
.........................................................................................................................TTTTATTTATTTATTTATTTATCTACCT.....................................................................................................281.000.00--1.00-------------
..............................................................................................................TGGGGGTTAGTTTTTTGT..........................................................................................................................181.000.00--1.00-------------
.............................................................................................................................ATTTATTTATTTATTTATCTTTTTTA...................................................................................................261.000.00-1.00--------------
........................................................................................................................TTTTTATTTATTTATTTATTGGGG..........................................................................................................241.000.00----1.00-----------
..............................................................................................................................TTTATTTATTTATTTATCTTGGG.....................................................................................................231.000.00----1.00-----------
........................................................................................................................TTTTTATTTATTTATTTATTTATCAG........................................................................................................261.000.00--1.00-------------
.............................................................................................................................ATTTATTTATTTATTTATCTGTGG.....................................................................................................241.000.00-----1.00----------
................................................................................................................................................................................TGATTTCTTTTTTCCTTTTTTC....................................................221.000.00--1.00-------------
..............................................................................................................................TTTATTTATTTATTTATCTTCAG.....................................................................................................231.000.00-1.00--------------
....................................................................................................................................TATTTATTTATCTTTCATT...................................................................................................1920.500.50--0.50-------------
.....................................................................................................................................................................................TCTTTTTTCCTTTTTCCAG..................................................1950.200.20--0.20-------------
..........................................................................................CAGATGGATTGTTTTT................................................................................................................................................1680.120.12---------------0.12

Antisense strand
GAGTGTGTGTAAAAGCCTGGGAATATCAGGATCACATTTATAGCTTAAACCTTCTTTTTTAGAGTAGTGTCTACTGTGACAACCGCTTGCCAGATGGATTGTTTTTATTTTGGGGGTTAGTTTTTATTTATTTATTTATTTATCTTTCATTTCTTATAATGACACGTTTTTAAATGTGATTTCTTTTTTCCTTTTTCCAGGAAGAAGAGTTGAGGAAAAGTGGAGAAGCGAAGTACTTCCATCTCAATGA
..................................................................................................................................................(((((......)))))((((((....))))))........................................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189785SRR189784GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR040008(GSM532893)
G727N. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................................TGGATTGTTTTTATTTTAAG........................................................................................................................................ 202.000.00--------2.00-------
.............................GATCACATTTATAGCTTGTT......................................................................................................................................................................................................... 201.000.00------1.00---------
.....................................................................TCTACTGTGACAACCTGT................................................................................................................................................................... 181.000.00----------1.00-----
..........................................................................................................ATTTTGGGGGTTAGTTTCATT........................................................................................................................... 211.000.00-----------1.00----
..........................................................................................................................................................................................................................AGTGGAGAAGCGAAGGGG.............. 181.000.00---------1.00------
........................................................................................................................................................................................................GAAGAAGAGTTGAGGTTTT............................... 191.000.001.00---------------
........................................................................................................................................................................................................................................GTACTTCCATCTCAATATCA 201.000.00-------------1.00--