ID: uc003xpe.2_intron_9_0_chr8_42330173_r.5p
GENE: (1)
chr8:42396764-42397013-


(1)
AGO1.ip 		(5)
B-CELL 		(20)
BREAST 		(21)
CELL-LINE 		(14)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(4)
HELA 		(5)
LIVER 		(2)
OTHER 		(35)
SKIN 		(1)
XRN.ip

Sense strand
GGACCGGGCGGGTGCTCGGAGTTTCGGGGACCGCACGGGACCGAGGGCAGGCGGGCGGCCACCCCCCTTACCCCCGCGTCCGGGGCGGGGCGGGCGGCGCGGGGCGGGGCCGGGTGACGCGGCCCCGCCGGGGACCGGGAGAAGCGGGGACGCGGGGCCACTCACGCTGCCGGCTCCGGAGGCGGCACGCGGCCAGCGCTGCTCCGCTCCGGGGCTCTTTACCCCGGAGTCGGGGCCGGGCGCGCGGGAA
......................................................................................................................((.(((...((((((.((((.((..(((....)))(((....)))...)).)))))))))).))).))................................................................
..................................................................................................................115.......................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577746(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM532880(GSM532880)
G659T. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		GSM532890(GSM532890)
G576T. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		TAX577590(Rovira)
total RNA. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)
.......................................................................................................................CGGCCCCGCCGGGGACGG.................................................................................................................1817.002.00-1.00-3.003.00---------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GCCGGCTCCGGAGGCGG.................................................................1716.006.00-6.00------------------------------------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGACGG.................................................................................................................1752.200.20--1.000.200.600.20------------------------------------------------------------------------------------------0.20-------------------
.......................................................................................................................CGGCCCCGCCGGGGAC...................................................................................................................1612.002.00--------------------------------------1.00------------1.00----------------------------------------------------------------
......................................................................................................................................................................................................................................CGGGGCCGGGCGCGCGTC..182.000.00----------------------------------------------------1.00----------------------------------1.00----------------------------
........................................................................................................................GGCCCCGCCGGGGACGGC................................................................................................................1851.800.20--1.40-------------------------0.20-----------------------------------------------------------------------------0.20---------
........................................................................................................................GGCCCCGCCGGGGACG..................................................................................................................1651.200.20----0.40------------------------0.20-------------------------------------------------------------------------0.20---0.200.20-------
........................................................................................................................................................................GCCGGCTCCGGAGGCGGCACG.............................................................2111.001.00--------------------------------------------1.00-----------------------------------------------------------------------
.....................................................................................CGGGGCGGGCGGCGCGGTG..................................................................................................................................................191.000.00--------------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................................................CGGCTCCGGAGGCGGCACGCGGC.........................................................2311.001.00-------1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................................CGGCCCCGCCGGGGACGGCG...............................................................................................................2011.002.00---1.00----------------------------------------------------------------------------------------------------------------
..........................................................................................................................CCCCGCCGGGGACCGTCGT.............................................................................................................191.000.00------------------------------------1.00-------------------------------------------------------------------------------
............................................................................................................................................................................GCTCCGGAGGCGGCACGCGGA.........................................................211.000.00-------------------------------------------------------------------------------------1.00------------------------------
................................................................................CGGGGCGGGGCGGGCGGTC.......................................................................................................................................................191.000.00-------------------------------------1.00------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCGGCACGCGGCCAGCG....................................................1911.001.00--------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CCGGGGCTCTTTACCCCG........................1811.001.00--------------------------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................ACCGGGAGAAGCGGGGG....................................................................................................171.000.00--------------------------------1.00-----------------------------------------------------------------------------------
................................................AGGCGGGCGGCCACCGCG........................................................................................................................................................................................181.000.00--------1.00-----------------------------------------------------------------------------------------------------------
............................................................................................GGCGGCGCGGGGCGGGAGAA..........................................................................................................................................201.000.00--------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................CGCGGCCCCGCCGGGGTC...................................................................................................................181.000.00-----------1.00--------------------------------------------------------------------------------------------------------
...........................................AGGGCAGGCGGGCGGCTGGT...........................................................................................................................................................................................201.000.00------------------------------------------------------------------------------1.00-------------------------------------
...............................................................................................................GGGTGACGCGGCCCCG...........................................................................................................................1611.001.00-------------------------------------------------------------------------1.00------------------------------------------
..............................................................................................................................................................................................GGCCAGCGCTGCTCCGCTCCGGGGCTTTTT..............................301.000.00-------------------------------------------------------------------------------1.00------------------------------------
...............................................................................................................................................................ACTCACGCTGCCGGCTCCGGAGGCGG.................................................................2611.001.00------------------------------------------------------------------------1.00-------------------------------------------
.........................................................................................GCGGGCGGCGCGGGGCCCCG.............................................................................................................................................201.000.00---1.00----------------------------------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGACGGCC...............................................................................................................1951.000.20--0.20-------------------------0.20---0.20-----------------------------------------------------------------------0.200.20----------
.......................................................................................................................................................................................GGCACGCGGCCAGCGCTGCTCCG............................................2311.001.00-----------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CTCTTTACCCCGGAGTCGG.................1911.001.00-1.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CGGCCCCGCCGGGGACGGCC...............................................................................................................2011.002.00--1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................CGGGGACGCGGGGCCGGT........................................................................................181.000.00------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................GGGGCGGGGCGGGCGGCGCCG....................................................................................................................................................211.000.00------------------------------------------------------------1.00-------------------------------------------------------
.........................................................................................................................................................................................................CTCCGCTCCGGGGCTCT................................1711.001.00--------------------------------------------------------------------------------1.00-----------------------------------
............................................................................................GGCGGCGCGGGGCGGGGT............................................................................................................................................181.000.00--1.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................................GAAGCGGGGACGCGGTTTT...........................................................................................191.000.00---------------------------------------------------------1.00----------------------------------------------------------
.............................ACCGCACGGGACCGAGGG...........................................................................................................................................................................................................1811.001.00-------------------------------------------------1.00------------------------------------------------------------------
......................................................................................................................................................................CTGCCGGCTCCGGAGGCGGCACGCGGCCAGCGCTGCTCCGCTCCGGGGC...................................4911.001.00--------------------------------------------------------------------------1.00-----------------------------------------
.................................................................................................................................................................................................................................GGAGTCGGGGCCGGGTGG.......181.000.00----------------------------------------------------------------------------------1.00---------------------------------
........................................................................................GGCGGGCGGCGCGGG...................................................................................................................................................1501.001.00------------------------------------------------------------------------------------1.00-------------------------------
........................................................................................................................GGCCCCGCCGGGGACCGC................................................................................................................181.000.00----------------------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................CTCCGGAGGCGGCACGC............................................................1711.001.00-------1.00------------------------------------------------------------------------------------------------------------
...........................................................................................................................CCCGCCGGGGACCGGCCGC............................................................................................................191.000.00----------------------------------------------------------------------------1.00---------------------------------------
............................................................................................GGCGGCGCGGGGCGGGGGT...........................................................................................................................................191.000.00-----------------------1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................ACGCTGCCGGCTCCGGAGG....................................................................1911.001.00---------------------------------------------------------------------------1.00----------------------------------------
..........................................................................................................................................................................................ACGCGGCCAGCGCTGCGCCC............................................201.000.001.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CGGCACGCGGCCAGCGCTG.................................................1911.001.00---------------------------1.00----------------------------------------------------------------------------------------
...........................................................................................GGGCGGCGCGGGGCGTCG.............................................................................................................................................181.000.00-----------------------------------------------1.00--------------------------------------------------------------------
.............................ACCGCACGGGACCGAGG............................................................................................................................................................................................................1711.001.00-----------------1.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CTCCGGAGGCGGCACGCGGCCAGCG....................................................2511.001.00-------------------------------------------------------1.00------------------------------------------------------------
..........................................GAGGGCAGGCGGGCGGCCCCCC..........................................................................................................................................................................................221.000.001.00-------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CGGCCCCGCCGGGGACCGG................................................................................................................1911.001.00--1.00-----------------------------------------------------------------------------------------------------------------
..........................................GAGGGCAGGCGGGCGGGTAC............................................................................................................................................................................................201.000.001.00-------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CTCCGGAGGCGGCACGCGGC.........................................................2011.001.00-------------------------1.00------------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGACGGA................................................................................................................1851.000.20--1.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................ACGCGGCCAGCGCTGCTCCG............................................2011.001.001.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................GCTGCCGGCTCCGGAGGC...................................................................1811.001.00-------------------------------------------------------------------1.00------------------------------------------------
..............................................................................................................................GCCGGGGACCGGGAGAAGC.........................................................................................................1911.001.00------------------------------1.00-------------------------------------------------------------------------------------
....................................................GGGCGGCCACCCCCCG......................................................................................................................................................................................161.000.00---1.00----------------------------------------------------------------------------------------------------------------
................................................................................CGGGGCGGGGCGGGCGGCG.......................................................................................................................................................1970.710.71-----------------------------0.14------------------------------------------------------------------0.14--0.29------------0.14---
................................................................................................................................................................................................................................CGGAGTCGGGGCCGGGC.........1720.500.50-------0.50------------------------------------------------------------------------------------------------------------
......................................................................CCCCCGCGTCCGGGG.....................................................................................................................................................................1520.500.50----------------------------------------------------------------------------------------------0.50---------------------
........................................................................................................................GGCCCCGCCGGGGACGTC................................................................................................................1850.400.20--0.20-------------------------0.20---------------------------------------------------------------------------------------
........................................................................................................................................................................GCCGGCTCCGGAGGCG..................................................................1630.330.33-------------0.33------------------------------------------------------------------------------------------------------
..........................................GAGGGCAGGCGGGCGGC...............................................................................................................................................................................................1730.330.33------0.33-------------------------------------------------------------------------------------------------------------
.....................................................................................CGGGGCGGGCGGCGCGGGG..................................................................................................................................................1970.290.29----------------------------------------------------------------------------------------------------0.14---------0.14-----
.....................................................................................................................CGCGGCCCCGCCGGG......................................................................................................................1570.290.29----------------------------------------------------------------------------------------------------0.14------------0.14--
.................................................................................GGGGCGGGGCGGGCGGCGCGGG...................................................................................................................................................2240.250.25------------------------------0.25-------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGAC...................................................................................................................1550.200.20------------------------------------------------------------------------------------------------------0.20-------------
........................................................................................................................GGCCCCGCCGGGGACGGG................................................................................................................1850.200.20--0.20-----------------------------------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGACGGCA...............................................................................................................1950.200.20--0.20-----------------------------------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGACGGGC...............................................................................................................1950.200.20--0.20-----------------------------------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGACGCC................................................................................................................1850.200.20----------------------------0.20---------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGACGGT................................................................................................................1850.200.20--0.20-----------------------------------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGACGT.................................................................................................................1750.200.20--0.20-----------------------------------------------------------------------------------------------------------------
........................................................................................................................GGCCCCGCCGGGGACGGAT...............................................................................................................1950.200.20--0.20-----------------------------------------------------------------------------------------------------------------
................................................................................CGGGGCGGGGCGGGCGGCGGG.....................................................................................................................................................2170.140.71---------------------------------------------------------------------------------------------------------------0.14----
......................................................................................................................GCGGCCCCGCCGGGG.....................................................................................................................1570.140.14-------------------------------------------------------------------------------------------------------------0.14------
.....................................................................................CGGGGCGGGCGGCGCGGGGGA................................................................................................................................................2170.140.29-------------------------------------------------------------------------------------------------------------------0.14

Antisense strand
GGACCGGGCGGGTGCTCGGAGTTTCGGGGACCGCACGGGACCGAGGGCAGGCGGGCGGCCACCCCCCTTACCCCCGCGTCCGGGGCGGGGCGGGCGGCGCGGGGCGGGGCCGGGTGACGCGGCCCCGCCGGGGACCGGGAGAAGCGGGGACGCGGGGCCACTCACGCTGCCGGCTCCGGAGGCGGCACGCGGCCAGCGCTGCTCCGCTCCGGGGCTCTTTACCCCGGAGTCGGGGCCGGGCGCGCGGGAA
......................................................................................................................((.(((...((((((.((((.((..(((....)))(((....)))...)).)))))))))).))).))................................................................
..................................................................................................................115.......................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577746(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM532880(GSM532880)
G659T. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		GSM532890(GSM532890)
G576T. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		TAX577590(Rovira)
total RNA. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)
...................................................................TTACCCCCGCGTCCGACGA.................................................................................................................................................................... 1926.000.0021.00-----------------1.00------------------------1.00------------------1.00---------------------------1.00-1.00-----------------------
.........................................................................................................................................................................................CACGCGGCCAGCGCTGCG............................................... 188.000.00-----3.00--1.00---3.00---------------------------------------------------------1.00---------------------------------------------
..................................................................CTTACCCCCGCGTCCCGA...................................................................................................................................................................... 185.000.005.00-------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GAGCCCCGGAGCGGAGCA................................. 1814.004.00----------3.00-----------------------------------------------------1.00---------------------------------------------------
..................................................................CTTACCCCCGCGTCCCGT...................................................................................................................................................................... 183.000.003.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CCGGCCCCGACTCCGGGGTAAA........... 2212.002.00---------2.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GCTCCGCTCCGGGGCGGCA............................... 192.000.00--------------2.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................CCCGGAGCGGAGCAGCGC..................................... 1812.002.00-------------1.00---------------------1.00--------------------------------------------------------------------------------
..........GGTGCTCGGAGTTTCGGTGCC........................................................................................................................................................................................................................... 212.000.00---------------2.00----------------------------------------------------------------------------------------------------
...................................................................TTACCCCCGCGTCCGACGC.................................................................................................................................................................... 192.000.002.00-------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................CGCGGCCAGCGCTGCGGG............................................. 182.000.00-----1.001.00-------------------------------------------------------------------------------------------------------------
...................................................................TTACCCCCGCGTCCGACGG.................................................................................................................................................................... 192.000.002.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGCCCCGGAGCGGAGCAG.................................. 1812.002.00---------------------2.00----------------------------------------------------------------------------------------------
..........GGTGCTCGGAGTTTCGGGT............................................................................................................................................................................................................................. 192.000.00----------------2.00---------------------------------------------------------------------------------------------------
................GTGCGGTCCCCGAAACTCCG...................................................................................................................................................................................................................... 2012.002.00------------------------2.00-------------------------------------------------------------------------------------------
...................................................................TTACCCCCGCGTCCGACTG.................................................................................................................................................................... 191.000.001.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CACGCGGCCAGCGCTGCGT.............................................. 191.000.00--------1.00-----------------------------------------------------------------------------------------------------------
.............................CCTCGGTCCCGTGCGGT............................................................................................................................................................................................................ 1711.001.00-------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................CGGGCGGCGCGGGGCTCGA............................................................................................................................................. 191.000.00----1.00---------------------------------------------------------------------------------------------------------------
..........GGTCCCGTGCGGTCCCCGAAACTCCGAGCACC................................................................................................................................................................................................................ 3211.001.00-------------------1.00------------------------------------------------------------------------------------------------
................................................................................................................................................................................................GGAGCGGAGCAGCGCTGG........................................ 1811.001.00-----------1.00--------------------------------------------------------------------------------------------------------
.........................CGGTCCCGTGCGGTCCCC............................................................................................................................................................................................................... 1811.001.00------------------------------------------------------------------1.00-------------------------------------------------
......................................................................................................................................................................................................AGAGCCCCGGAGCGGAGCAG................................ 2011.001.00------------------------------------------------------1.00-------------------------------------------------------------
....................................................................................................................................................................................................AGCCCCGGAGCGGAGCAGCG.................................. 2011.001.00---------------------------------------------------------------------------------1.00----------------------------------
...........................................................GCCCCGGACGCGGGGGTAAGGGGGGTG.................................................................................................................................................................... 2711.001.00---------------------------------1.00----------------------------------------------------------------------------------
..........GGTGCTCGGAGTTTCGTGC............................................................................................................................................................................................................................. 191.000.00--------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ACTCCGGGGTAAAGAGCC.................... 1811.001.00-----------------1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GACTCCGGGGTAAAGAGC................... 1811.001.00-------------------------------1.00------------------------------------------------------------------------------------
............................................................................................GGCGGCGCGGGGCGGAAA............................................................................................................................................ 181.000.00-----1.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CACGCGGCCAGCGCTGCGTT............................................. 201.000.00--------------------------1.00-----------------------------------------------------------------------------------------
...................................................................................................................................................................................................GCGCTGCTCCGCTCCGGGGCTCTCGG............................. 261.000.00-----------------------1.00--------------------------------------------------------------------------------------------
..........CCGAAACTCCGAGCACC............................................................................................................................................................................................................................... 1711.001.00---------------------------------------------1.00----------------------------------------------------------------------
..................................................................CTTACCCCCGCGTCCCGGG..................................................................................................................................................................... 191.000.001.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GTAAAGAGCCCCGGA............................ 1531.001.00-----------------------------------------------------------------------------------------------0.33-0.330.33-----------------
.........................................................................................................................................................................................GCGGAGCAGCGCTGGCCGCGTG........................................... 2211.001.00-----------------------------------------------------------------------------1.00--------------------------------------
.............................CTCGGTCCCGTGCGGT............................................................................................................................................................................................................. 1611.001.00-------------1.00------------------------------------------------------------------------------------------------------
......................................................................................GGGGCGGGCGGCGCGCGG.................................................................................................................................................. 181.000.00---1.00----------------------------------------------------------------------------------------------------------------
..........................................................................................................GGGCCGGGTGACGCGGG............................................................................................................................... 171.000.00------------------1.00-------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................ACGCGGCCAGCGCTGCAG.............................................. 181.000.00----------------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................GTCGGGGCCGGGCGCGGC.... 181.000.00-------------------------------------------------------------------------------------------1.00------------------------
........CCCGAAACTCCGAGCACCCG.............................................................................................................................................................................................................................. 2011.001.00---------------------------------------------------------------1.00----------------------------------------------------
...................................................................TTACCCCCGCGTCCGAC...................................................................................................................................................................... 171.000.001.00-------------------------------------------------------------------------------------------------------------------
............CCCGTGCGGTCCCCGAAACTCCGAGCA................................................................................................................................................................................................................... 2711.001.00-----------------------------------------------------------1.00--------------------------------------------------------
......CCCGAAACTCCGAGCACCCGCC.............................................................................................................................................................................................................................. 2211.001.00---------------------------1.00----------------------------------------------------------------------------------------
..............................................................................................................................................GCAGCGTGAGTGGCCCCGCGTCCCCGCT................................................................................ 2811.001.00---------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................ACGCGGCCCCGCCGGGGAACGT................................................................................................................ 221.000.00------1.00-------------------------------------------------------------------------------------------------------------
..................GTGCGGTCCCCGAAACTC...................................................................................................................................................................................................................... 1811.001.00-----------------------------------------------------------------1.00--------------------------------------------------
..............CGGTCCCCGAAACTCCGAG......................................................................................................................................................................................................................... 1911.001.00----------------------------------1.00---------------------------------------------------------------------------------
...................................................................................................CGGGGCGGGGCCGGGTGACG................................................................................................................................... 201.000.00-----------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................................................................GCAGCGCTGGCCGCGTGC................................................ 1811.001.00-----1.00--------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GAGCCCCGGAGCGGAGCAGCGCTGGCCGCGTGCC................................. 3411.001.00-------------------------------------------------------------1.00------------------------------------------------------
................................................................................................................................................................................................CCGGAGCGGAGCAGCGCTGG...................................... 2011.001.00-------------------------1.00------------------------------------------------------------------------------------------
...................GGTCCCGTGCGGTCCCCGAAACT................................................................................................................................................................................................................ 2311.001.00----------------------------------------------------------1.00---------------------------------------------------------
.................................................................................................................................................................................................................................GGAGTCGGGGCCGGGTACC...... 191.000.00----------------------------------------1.00---------------------------------------------------------------------------
..........CGTGCGGTCCCCGAAACTCCGAGCACC..................................................................................................................................................................................................................... 2711.001.00-------1.00------------------------------------------------------------------------------------------------------------
..........GGTGCTCGGAGTTTCGGGGACCGCACTGC................................................................................................................................................................................................................... 291.000.00-------1.00------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................GCGCTGCTCCGCTCCGGGGCA.................................. 211.000.00-----------------------------------------------------------------------------------------1.00--------------------------
......AAACTCCGAGCACCCGCC.................................................................................................................................................................................................................................. 1811.001.00----------------------1.00---------------------------------------------------------------------------------------------
.....................................................................................................................CGCGGCCCCGCCGGGCGGG.................................................................................................................. 1971.000.00------------------------------------------1.00-------------------------------------------------------------------------
..........GGTGCTCGGAGTTTCGTG.............................................................................................................................................................................................................................. 181.000.00-----------------------------------------------------------------------1.00--------------------------------------------
...................................................................TTACCCCCGCGTCCGAGTT.................................................................................................................................................................... 191.000.001.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CACGCGGCCAGCGCTGCGTTA............................................ 211.000.00------1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................CCCCGGAGCGGAGCAGCGCTGGCCGC.................................... 2611.001.00-----------------------------------------1.00--------------------------------------------------------------------------
....CCCGAAACTCCGAGCACCCGCCCG.............................................................................................................................................................................................................................. 2411.001.00------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................GGGTAAAGAGCCCCGGAGCGGAGCAGCG.......................... 2811.001.00----------------------------------------------------------------------------------------1.00---------------------------
..................................................................CTTACCCCCGCGTCCCAA...................................................................................................................................................................... 181.000.001.00-------------------------------------------------------------------------------------------------------------------
..........................CTCGGTCCCGTGCGGTCCC............................................................................................................................................................................................................. 1911.001.00-----------------------------------------------------------------------------------1.00--------------------------------
.....................................................................................................................CGCGGCCCCGCCGGGGGA................................................................................................................... 1871.000.00----1.00---------------------------------------------------------------------------------------------------------------
..........CCCGAAACTCCGAGCACC.............................................................................................................................................................................................................................. 1811.001.00------------------------------------------------1.00-------------------------------------------------------------------
...........GTCCCCGAAACTCCGAGCAC........................................................................................................................................................................................................................... 2011.001.00--------------------1.00-----------------------------------------------------------------------------------------------
..........GGTGCTCGGAGTTTCGGGTG............................................................................................................................................................................................................................ 201.000.00-1.00------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................GCGTGCCGCCTCCGGAGC............................................................ 1811.001.00----------------------------------------------1.00---------------------------------------------------------------------
.........................................................GGACGCGGGGGTAAGGGGGGTGGC......................................................................................................................................................................... 2411.001.00---------------------------------------1.00----------------------------------------------------------------------------
...................................................................TTACCCCCGCGTCCGCCGA.................................................................................................................................................................... 191.000.001.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GAGCCCCGGAGCGGAGCAG................................. 1911.001.00---------------------------------------------------------------------------------------------1.00----------------------
..........................................................CCACCCCCCTTACCCTTTT............................................................................................................................................................................. 191.000.00--------------------------------------------------------------------1.00-----------------------------------------------
................................................................................................................................................................................................CGGAGCGGAGCAGCGCTGG....................................... 1911.001.00---------------------------------------------------------------------1.00----------------------------------------------
..................................................................................................................................................................................................CCCCGGAGCGGAGCAGCGCT.................................... 2011.001.00--------------------------------------------------1.00-----------------------------------------------------------------
...................................................................TTACCCCCGCGTCCGCGAT.................................................................................................................................................................... 191.000.001.00-------------------------------------------------------------------------------------------------------------------
.................................................................CCCGCCCCGGACGCGGGGGTAAGG................................................................................................................................................................. 2411.001.00-----------------------------------------------------1.00--------------------------------------------------------------
..................................................................................................................GGCGGGGCCGCGTCA......................................................................................................................... 1520.500.50----0.50---------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................CCCGGAGCGGAGCAG..................................... 1540.250.25-----------------------------------------------------------------------------------------------------0.25--------------
.........................................................................................................................................................................................................AGCCCCGGAGCGGAG.................................. 1550.200.20-------------------------------0.20------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................CCCGCGCGCCCGGCCCC.. 1770.140.14-----------------------------------------------------------------------------------------------0.14--------------------
.......................................................................................................................................................................................................................................GGGGCCGGGCGCGCGGGTCT 200.140.00------------------------------------------------------------------------------------------------------------------0.14-