ID: uc003xeg.2_intron_40_0_chr8_25246749_f.5p
GENE: (41)
chr8:25246699-25246948+


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(11)
B-CELL
(5)
BRAIN
(49)
BREAST
(54)
CELL-LINE
(37)
CERVIX
(2)
FIBROBLAST
(8)
HEART
(4)
HELA
(1)
KIDNEY
(12)
LIVER
(3)
OTHER
(2)
RRP40.ip
(92)
SKIN
(1)
TESTES
(4)
UTERUS
(1)
XRN.ip

Sense strand
GACCAGTACCACGCCTCCTGGGGAAGACATCAAGTCGTCCCCCAAGCAGTGTATCCTTTCCGGGGGGAGTATGGCCCCGAGGCTCTTATGGCTGTGCACAGCCCCAGCTAAGCCAGAGAACATAGGAGCTACAGTCCCTTCTCTGCAGACACACCATCTTCTCAAGCATTCTGACACAGGTTCCCATTCCATGTAAAATCTTTGGGACCCTAATAGCATTAGCTGGTGGTGATGACATAACAAAAGAGGA
..................................................((.((......(((((((...((....)).((((((((((.(((.((..(((....)))..)))))....))))))))))....)))))))......)).))..................................................................................................
..................................................51....................................................................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR189785SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040009(GSM532894)
G727T. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR040010(GSM532895)
G529N. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR040025(GSM532910)
G613T. (cervix)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR040018(GSM532903)
G701N. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040033(GSM532918)
G603T. (cervix)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
GSM532884(GSM532884)
G871T. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR040027(GSM532912)
G220T. (cervix)
SRR343336SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040017(GSM532902)
G645T. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR040013(GSM532898)
G648T. (cervix)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR040029(GSM532914)
G026T. (cervix)
SRR040021(GSM532906)
G761T_2. (cervix)
SRR040023(GSM532908)
G575T. (cervix)
SRR040031(GSM532916)
G013T. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR189782SRR040007(GSM532892)
G601T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR189787SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029128(GSM416757)
H520. (cell line)
TAX577741(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR040024(GSM532909)
G613N. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR343337TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040030(GSM532915)
G013N. (cervix)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR040026(GSM532911)
G220N. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
GSM532888(GSM532888)
G761T. (cervix)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR040006(GSM532891)
G601N. (cervix)
SRR040038(GSM532923)
G531N. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR343334SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)
GSM532889(GSM532889)
G576N. (cervix)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040011(GSM532896)
G529T. (cervix)
GSM532875(GSM532875)
G547N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR191495(GSM715605)
159genomic small RNA (size selected RNA from . (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038859(GSM458542)
MM386. (cell line)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR343335SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
GSM532887(GSM532887)
G761N. (cervix)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
...........................................................CCGGGGGGAGTATGGTTGC............................................................................................................................................................................1912715.00223.0075.0063.0051.00161.00125.00112.00110.006.0073.0030.0039.0021.0028.0057.0034.0059.0042.0036.0042.0043.0076.0018.0077.0027.0068.0035.0049.0046.0025.0049.0026.0022.0044.0014.0041.0041.0013.0051.0024.0026.0046.0031.0020.009.0021.0025.0029.0030.0015.008.0036.0031.0024.0012.0039.0014.0032.00-7.0014.005.004.0011.0025.0015.007.003.0012.0011.005.006.004.0011.004.002.005.004.002.006.004.002.001.004.0010.001.001.005.001.002.00-6.003.001.004.001.002.00-1.001.002.002.006.00-1.002.002.001.002.00-4.00-2.004.00-1.001.001.001.001.00-1.00--1.00-----3.001.00-3.002.00--1.001.001.00-3.001.001.003.00--1.00-1.003.002.00--2.00-1.00-----1.00----1.00---1.001.00-2.001.00-3.00-1.00-------2.00-1.00---2.00-1.00---1.00----------1.00-2.001.002.00------1.002.001.00--1.00----1.00----------1.00------------------1.00-1.00-----1.00------------1.00-----1.00-----
..........................................................TCCGGGGGGAGTATGGTTGC............................................................................................................................................................................2011434.00179.0038.0019.0040.0057.0054.0047.0057.005.0044.0015.0034.0021.0016.0025.0015.0036.0027.0019.0046.0039.0015.0020.007.0020.0021.0018.0026.0026.0014.0023.0044.0020.0029.0013.0025.0016.0019.0024.0015.0021.0018.0018.0028.007.006.0010.0023.0016.001.006.0015.0014.0014.008.007.007.0010.00-4.004.003.002.003.008.0011.003.00-11.007.002.001.003.004.002.001.004.002.003.002.002.004.00-2.003.002.003.002.002.00--7.00--3.001.00----1.00-1.002.002.003.003.001.00-3.004.00-2.001.001.001.00---1.00--1.00-1.00----1.00-2.00---------1.00--1.00---------2.00-1.00----------------------1.001.00---------------1.00-------1.00-1.00------------------1.00------------1.00-----------------------1.00-----------------1.00-------------
...........................................................CCGGGGGGAGTATGGTTG.............................................................................................................................................................................181656.00223.0031.00194.0018.004.007.005.004.005.004.0016.006.0018.0015.003.005.004.006.009.006.005.003.006.002.004.003.007.003.006.004.00-4.001.002.006.006.004.009.001.004.003.004.003.002.0015.007.001.001.002.006.001.002.002.002.001.00-4.003.001.004.003.002.007.001.00-2.002.008.004.002.003.006.002.001.003.00--3.002.009.00-1.001.001.00-2.001.001.00--2.00-1.00-1.003.002.00----5.00--2.00-2.003.001.00--2.001.001.00-3.003.001.003.001.001.003.001.002.002.00---1.00-1.00--2.00-4.00---1.00--1.00--1.00-----1.00-1.00---1.00-2.00---1.001.00-----3.001.00---1.001.00--1.001.002.00--------1.00----1.001.001.00-1.00--------2.00-----------1.00------------1.00-------------1.00------------------------1.00---------------------
...........................................................CCGGGGGGAGTATGGTT..............................................................................................................................................................................171471.00223.0055.006.0039.008.003.002.005.002.009.0018.009.0018.0018.006.008.006.008.0013.003.001.001.0010.0016.006.003.0010.002.009.005.001.005.004.003.004.001.003.003.001.005.003.001.001.001.00-1.005.001.001.005.007.001.001.004.005.002.001.002.003.004.004.008.00-2.001.002.002.00-2.002.005.006.006.002.00--1.001.001.00-3.001.00---1.00--1.00----4.00--1.00--3.001.003.002.00----2.00--------------------2.00--1.00----3.00-----1.00--1.001.00-----------------2.00----2.00--1.001.00---------1.00-1.00--------------1.001.00---1.00------------------1.00----1.00-----1.00-----------------1.00------------1.00---------1.00-----------------
..........................................................TCCGGGGGGAGTATGGTT..............................................................................................................................................................................181427.00179.0044.00-41.004.006.002.003.00-7.0019.003.0021.0011.007.004.005.008.004.004.007.001.0012.002.0010.002.003.002.00-2.007.003.001.00-3.001.002.002.00-3.002.001.004.001.0010.002.001.001.001.00-1.001.00-3.001.00-4.002.001.004.001.004.005.005.004.001.004.007.00-1.006.003.002.00-2.00--3.003.006.00-1.002.001.001.002.00--1.00-9.00-3.00-1.003.001.00-------2.001.00-----2.002.00-3.00-1.003.001.00--1.00--1.00---------2.001.00--2.00-1.00--3.00--3.00----1.00-1.00-2.00-1.00---1.00---1.00--------------1.00---1.00-----1.00-1.00------------1.00------------1.00--1.00----1.00----------1.00-----------1.00----------1.00----1.00-------1.00--------------------
.........................................................TTCCGGGGGGAGTATGGTT..............................................................................................................................................................................191413.00358.0053.00-33.005.001.003.001.008.00-21.008.0014.0015.005.006.004.006.003.002.002.001.0011.003.003.001.007.00--6.002.00-3.00-3.001.004.005.00-4.005.00-1.00-6.002.002.00--3.005.002.002.002.00---1.00-1.003.005.006.004.001.004.002.006.001.002.001.00-1.001.001.00-3.001.004.001.004.001.005.00-2.001.002.00-1.003.00--2.00-1.00--4.003.00-2.00--4.002.00-1.00-1.00--1.00--2.001.00-2.00-1.003.001.002.002.001.00---1.00-2.00-------1.002.002.00---------1.00--1.00---1.002.00---1.00--1.00----------1.00-----2.001.00----------2.00---2.00------------------1.00-1.00---1.00-1.00------1.00-------1.001.00----------1.00-----------1.00--1.00------1.00---1.00---------------
..........................................................TCCGGGGGGAGTATGGTTG.............................................................................................................................................................................191398.00179.0022.0043.0026.004.005.001.006.004.007.008.006.0010.008.007.0010.005.003.0011.005.005.005.0010.002.001.004.002.005.00-1.001.008.001.004.005.002.001.00-1.007.008.002.001.001.0011.002.003.00-3.002.003.003.001.003.001.002.004.00--2.004.002.003.001.002.00-3.00-1.00-3.008.00-1.002.002.00----1.002.00-5.00-2.001.00-2.00-2.00--1.00-2.00--------1.00-1.002.001.002.001.001.002.00-1.001.002.001.00-2.001.00--1.00------------2.00---1.001.001.001.00-----1.00---1.00------3.00-----------1.00--1.00--------1.00---------------------------------1.00-----------------1.00-------1.00----------1.00-------------------------1.00-----------1.00
.........................................................TTCCGGGGGGAGTATGG................................................................................................................................................................................171358.00358.003.00-5.005.003.008.001.0061.003.001.0018.002.001.003.0011.003.003.004.00--1.001.001.001.001.006.004.002.0011.003.001.009.00-11.00-1.0010.002.001.003.001.004.002.00-2.003.003.001.0015.003.00-2.002.003.00-4.001.0049.008.003.00--5.001.002.003.00-1.00-1.00-2.002.004.00-2.00---2.002.001.002.00---1.004.00-------1.00--1.00--------1.00----------------3.00-1.00----------------1.00----------1.00----------1.00--1.00--------1.00---------------------------------------------------------------------------------------------------------------1.00---
.........................................................TTCCGGGGGGAGTATGGTTGC............................................................................................................................................................................211328.00358.002.0012.004.008.004.004.001.001.0010.0018.008.0011.0010.003.009.001.004.002.001.002.003.003.002.003.002.00-3.001.007.005.001.001.003.006.002.003.009.002.005.004.003.003.001.004.004.004.002.004.007.004.004.004.001.002.001.006.00----4.0012.002.004.001.00-2.001.001.00--3.002.003.00-2.004.00--1.00-4.001.001.001.001.00----1.001.00-1.002.00---1.00---2.00--1.00--2.00-1.00---1.001.00-1.001.00-2.00--1.00----1.00----1.00--2.00-1.00-----1.00-1.00---------1.001.00--------1.00-----1.00--1.00--------------2.001.00----------1.00-----1.00---1.00--1.00--1.001.00-------1.00-----1.00----------------1.00-------------------------------1.00----------
.........................................................TTCCGGGGGGAGTATGGTTG.............................................................................................................................................................................201291.00358.0012.0063.0010.004.001.001.00-14.002.006.007.0014.0010.004.001.00-6.002.00-2.00-8.001.001.00-4.001.001.001.001.001.002.00-2.002.002.001.00-2.00--1.001.006.001.002.001.00-3.002.00--1.003.00-1.00--2.002.001.009.001.002.00--3.001.001.00--1.001.001.00---1.002.00-3.002.001.00-1.004.00-----1.00-1.001.00---1.00-1.00--1.00------3.00--1.001.00--2.00-2.00-1.00-----2.00-----1.00-----1.00-------1.001.00--1.00--------------1.001.00-------------------1.00-----------1.001.001.001.00--1.00--1.001.00------1.00------------1.00-------------------------1.00-----------1.00-1.00------1.00-1.00---------1.00----
...........................................................CCGGGGGGAGTATGGT...............................................................................................................................................................................161276.00223.0015.00-21.004.0011.006.004.00-9.0010.002.003.00-3.007.005.005.009.001.002.004.004.00-5.003.003.003.001.004.005.005.003.007.004.003.003.003.002.003.00-1.001.005.00-4.004.001.002.00-3.00-1.002.003.002.002.002.00-2.005.005.00-2.00------1.003.001.00-1.00--1.003.00-1.00--1.00---1.001.005.00---5.001.00-2.007.006.00--------1.003.00---------------------------------------1.00------------------------------------------------------------------1.00-----------------------1.00------------------------------------------------------
.........................................................TTCCGGGGGGAGTATG.................................................................................................................................................................................161258.00258.0010.00-4.004.003.00-1.0054.002.002.007.001.004.006.0013.001.004.003.002.002.00-2.00-5.001.001.002.00-6.001.002.0017.00-1.001.009.002.00-4.00--2.002.00-2.003.00-1.00-9.00-2.001.005.00-1.00--5.00---5.00-2.005.00--3.004.00-3.003.002.00-2.00-2.00-3.002.001.001.001.00---1.001.00-------1.001.002.00-----------------------------------------------1.00--------------------2.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGT...............................................................................................................................................................................171253.00179.0016.00-12.007.004.005.004.00-4.008.006.009.007.003.003.002.004.003.004.004.005.004.001.004.001.003.004.007.002.002.00-1.003.006.004.003.002.004.003.004.001.003.00--2.002.001.002.002.003.00-3.001.001.004.00---2.001.00---1.001.003.00--2.00-1.002.00-1.00--5.003.00-1.00-1.001.001.002.00---1.00-1.00-3.001.00-2.001.003.00-1.00------1.001.003.002.00-1.00---------1.00-------------------1.00------------------1.001.00--1.00-----1.00-1.00---------------1.00-------------------------------------------------------------------1.00--------------------------1.00--1.00------
...........................................................CCGGGGGGAGTATGG................................................................................................................................................................................151223.00223.001.00-5.006.004.001.002.0010.007.001.0011.001.001.004.007.0011.007.004.004.002.001.00--8.001.003.006.002.009.001.005.009.002.003.002.001.001.001.002.002.00-2.006.00-6.001.003.002.00-3.00-1.001.006.00-3.001.00-1.006.00--2.00-3.001.00--1.00--2.002.002.00-3.00-2.00-1.001.00-2.001.00--1.00---1.00----1.00--1.00-----1.00-------------------1.00----------------------------------------------------1.00-------------------------1.00----------1.00-------------------------------------------------------1.00----------------------
..........................................................TCCGGGGGGAGTATGG................................................................................................................................................................................161179.00179.006.00-2.001.002.004.001.0020.005.001.004.00--8.009.001.004.003.001.001.001.001.00-6.001.006.002.003.008.00--3.001.006.00-1.006.00-3.002.001.003.001.00-4.00-1.001.00-4.00---4.00-1.002.00--3.00--3.00--3.00-1.00-1.001.002.001.001.00-2.00---1.00-2.00----3.001.00-------2.00--2.001.00-1.00--1.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-
..........................................................TCCGGGGGGAGTATG.................................................................................................................................................................................151177.00177.009.00-5.003.007.002.001.008.007.003.0013.005.004.003.005.003.002.003.002.00--3.00-6.00-1.00-3.00--1.009.001.005.004.002.003.00-3.00-----4.002.00---5.002.00--3.00-1.00--1.00---2.00--1.00--2.003.00-1.001.00--3.00-------1.00--1.001.004.00----1.00--1.00-1.00--1.00--2.00-------1.00-------------1.00--------------------1.00------1.00------------------------------------------------------------1.00----------1.00----------------------1.00-------------------------------------------
.........................................................TTCCGGGGGGAGTATGGT...............................................................................................................................................................................181160.00358.0011.00-8.003.003.00---1.003.003.005.003.003.002.002.001.002.00-2.002.005.00-3.001.003.00-2.003.002.001.001.00-3.001.001.002.00--3.00--4.00-1.002.00-2.007.00--1.00-2.001.001.00--3.001.003.00-----7.00--------1.001.00--1.001.001.00--1.00----3.00-4.001.00-1.00---------1.00--1.00----1.001.00----1.001.00-1.001.00-1.00-------1.00---1.00-------2.00--1.00----------1.00---1.00--------------1.00------1.001.00----------1.00----1.00--------1.00------------1.00---------------------1.00--------------------------------------------1.00--
.........................................................TTCCGGGGGGAGTAT..................................................................................................................................................................................15129.0029.001.00-11.00----1.00---2.004.00----2.00----------------------------------------2.00-1.00------2.001.00-----------------------------------------------------------------------------------------------------------------------------------------2.00--------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTCG.............................................................................................................................................................................18115.00223.00-----------1.00------------------------------------------------4.00-------------7.00------------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------
.........................................................TTCCGGGGGGAGTATGGTCG.............................................................................................................................................................................20114.00358.00-----1.00---1.00--------------------------------------------------1.00-------------7.00----------1.00----------------------1.00------------------------------------------1.00--------1.00------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTTGT............................................................................................................................................................................19111.00223.00--3.00----------1.00----1.001.001.00-------1.001.00------------------------------------------------------1.00----------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTCGC............................................................................................................................................................................21111.00358.00---------2.00----------------------------------------------------------------4.00----------1.00---------------------------------------------4.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTCGC............................................................................................................................................................................19110.00223.002.00----------1.001.00------1.00--1.00-----------1.00-------------------------1.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------
..........................................................TCCGGGGGGAGTATGGTTGT............................................................................................................................................................................2019.00179.00---------3.00-----2.00-------------1.00------------------2.00---------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTC..............................................................................................................................................................................1915.00358.00------------------------------------1.00-----------------------1.00-------------------2.00--------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................TTTCCGGGGGGAGTATG.................................................................................................................................................................................1715.005.00---------------------------------------------------------1.00------1.00----------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------
..........................................................TCCGGGGGGAGTATGGTCGC............................................................................................................................................................................2015.00179.00--------------------------------------------------------------------------1.00-----------1.00------------1.00-----1.00--------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGTC..............................................................................................................................................................................1815.00179.00----------------------------------------------------------------------------------------------------------------------------1.00-3.00----------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGATC.............................................................................................................................................................................1915.00179.00-----------------------------------------------------------------------------------------------------------------------------5.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGTTCC............................................................................................................................................................................2014.00179.00--1.00------1.00---------1.00---------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTTGA............................................................................................................................................................................1914.00223.00-----------------2.00----------------------------------------------------------------------------------1.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
............................................................CGGGGGGAGTATGGCTGC............................................................................................................................................................................1814.003.001.001.00----------1.00-----------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................TTTCCGGGGGGAGTATGGTTGC............................................................................................................................................................................2214.003.00------------------------------------------------------------------------------------------------------------------------------1.00-2.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
........................................................TTTCCGGGGGGAGTATGGT...............................................................................................................................................................................1914.003.00--1.00---------1.00--------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
........................................................TTTCCGGGGGGAGTATGGTT..............................................................................................................................................................................2014.003.00------------1.00---1.00--------------------------------------------1.00----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGCT..............................................................................................................................................................................1913.002.00------------------------------------------------------------------------------------------------------2.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGTCG.............................................................................................................................................................................1913.00179.00-------------------------------------------1.00----------------1.00------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGGTGC............................................................................................................................................................................2013.00179.00------------------1.00--1.00--------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGTTTC............................................................................................................................................................................2013.00179.00----1.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
........................................................TTTCCGGGGGGAGTATGG................................................................................................................................................................................1813.003.00--------------------------------1.00-------------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTTTC............................................................................................................................................................................1913.00223.00-----1.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
............................................................CGGGGGGAGTATGGC...............................................................................................................................................................................1513.003.001.00-1.00------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGTTAC............................................................................................................................................................................2013.00179.001.00--------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTTGT............................................................................................................................................................................2112.00358.00-----------1.00------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGTTG..............................................................................................................................................................................1912.00258.00------------------------------------1.00---------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTGC.............................................................................................................................................................................1812.00223.00--1.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTTA.............................................................................................................................................................................2012.00358.00------------------------------------------------------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTTT.............................................................................................................................................................................1812.00223.00--------------------1.00---------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................TTTCCGGGGGGAGTATGGTTG.............................................................................................................................................................................2112.003.00-1.00-----------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................TTTCCGGGGGGAGTA...................................................................................................................................................................................1512.002.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGGT..............................................................................................................................................................................1812.00179.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATAGT...............................................................................................................................................................................1812.0029.001.00------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGC...............................................................................................................................................................................1812.002.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTG..............................................................................................................................................................................1712.00223.00-------------------------------------------------------2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................CTTTCCGGGGGGAGTATGG................................................................................................................................................................................1912.002.00--------1.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGATGC............................................................................................................................................................................1912.00223.00--------1.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTTAC............................................................................................................................................................................2112.00358.002.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................CGGGGGGAGTATGGCT..............................................................................................................................................................................1612.003.00-----------1.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTGCA............................................................................................................................................................................1911.00223.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTCGT............................................................................................................................................................................1911.00223.00--------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGGTGC............................................................................................................................................................................1911.00223.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....AGTACCACGCCTCCTGGGGAAGT...............................................................................................................................................................................................................................231.000.00------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGTAGC............................................................................................................................................................................2011.00179.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTTAC............................................................................................................................................................................1911.00223.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGGTT.............................................................................................................................................................................1811.00223.00----------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGACG.............................................................................................................................................................................1911.00179.00-------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGGGA.............................................................................................................................................................................2011.00358.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTGCA............................................................................................................................................................................2111.00358.00----------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................CTTTCCGGGGGGAGTATGGTTG.............................................................................................................................................................................2211.002.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGCCGC............................................................................................................................................................................211.000.00-----------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGATGC............................................................................................................................................................................2111.00358.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................GTAAAATCTTTGGGACCCCAAC....................................221.000.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------
..........................................................TCCGGGGGGAGTATGGTTGG............................................................................................................................................................................2011.00179.00----------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGTTT..............................................................................................................................................................................1911.00258.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGGTGC............................................................................................................................................................................2111.00358.00------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGGTG.............................................................................................................................................................................1811.00223.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGATC.............................................................................................................................................................................1811.00223.00-----------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGATTG.............................................................................................................................................................................2011.00258.00----------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTTGG............................................................................................................................................................................1911.00223.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................GAGCTACAGTCCCTTCTCTGC........................................................................................................2111.001.00-----------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGTTT..............................................................................................................................................................................1811.00177.00-----------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGCG...............................................................................................................................................................................1711.00177.00----------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGCTGCA...........................................................................................................................................................................2211.002.00-------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATTGTT..............................................................................................................................................................................1911.0029.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGAT..............................................................................................................................................................................1811.00179.00------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTTTA............................................................................................................................................................................2111.00358.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------
...........................................................................................................................................TCTCTGCAGACACACGGTC............................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGGA..............................................................................................................................................................................1711.00223.00----------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGT................................................................................................................................................................................1711.00258.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................CGGGGGGAGTATGGCCAA............................................................................................................................................................................181.000.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGATGC............................................................................................................................................................................2011.00179.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................ATCAAGTCGTCCCCCAAGCAGTACA.....................................................................................................................................................................................................251.000.00---------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................ATGTAAAATCTTTGGGCT..........................................181.000.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATTGC...............................................................................................................................................................................1811.0029.00---------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................AGACATCAAGTCGTCCCCCAAGCAGT........................................................................................................................................................................................................2611.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.......................................................CTTTCCGGGGGGAGT....................................................................................................................................................................................1511.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGCT..............................................................................................................................................................................1811.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGTAG.............................................................................................................................................................................1911.00179.00--------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................TTTCCGGGGGGAGTATGGGTGC............................................................................................................................................................................2211.003.00--------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGTTA.............................................................................................................................................................................1911.00179.00------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGCC..............................................................................................................................................................................1711.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTC..............................................................................................................................................................................1711.00223.00--------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGGCG.............................................................................................................................................................................1911.00179.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTTGA............................................................................................................................................................................2111.00358.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTGTT............................................................................................................................................................................1911.00223.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................CGGGGGGAGTATGGCTC.............................................................................................................................................................................1711.003.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGACC.............................................................................................................................................................................1811.00223.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGCTG.............................................................................................................................................................................2011.002.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTAGC............................................................................................................................................................................1911.00223.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGATT..............................................................................................................................................................................1811.00177.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGTGG.............................................................................................................................................................................1911.00179.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................TCCGGGGGGAGTATGGC...............................................................................................................................................................................1711.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGTCAA............................................................................................................................................................................1911.00223.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
...........................................................CCGGGGGGAGTATGGCTGT............................................................................................................................................................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTCTT............................................................................................................................................................................2111.00358.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTGC.............................................................................................................................................................................2011.00358.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGA................................................................................................................................................................................1711.00258.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGTTT.............................................................................................................................................................................2011.00358.00-------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................CGGGGGGAGTATGGCTGCA...........................................................................................................................................................................1911.003.00----------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCGGGGGGAGTATGGATG.............................................................................................................................................................................1811.00223.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
GACCAGTACCACGCCTCCTGGGGAAGACATCAAGTCGTCCCCCAAGCAGTGTATCCTTTCCGGGGGGAGTATGGCCCCGAGGCTCTTATGGCTGTGCACAGCCCCAGCTAAGCCAGAGAACATAGGAGCTACAGTCCCTTCTCTGCAGACACACCATCTTCTCAAGCATTCTGACACAGGTTCCCATTCCATGTAAAATCTTTGGGACCCTAATAGCATTAGCTGGTGGTGATGACATAACAAAAGAGGA
..................................................((.((......(((((((...((....)).((((((((((.(((.((..(((....)))..)))))....))))))))))....)))))))......)).))..................................................................................................
..................................................51....................................................................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR189785SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040009(GSM532894)
G727T. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR040010(GSM532895)
G529N. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR040025(GSM532910)
G613T. (cervix)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR040018(GSM532903)
G701N. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040033(GSM532918)
G603T. (cervix)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
GSM532884(GSM532884)
G871T. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR040027(GSM532912)
G220T. (cervix)
SRR343336SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040017(GSM532902)
G645T. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR040013(GSM532898)
G648T. (cervix)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR040029(GSM532914)
G026T. (cervix)
SRR040021(GSM532906)
G761T_2. (cervix)
SRR040023(GSM532908)
G575T. (cervix)
SRR040031(GSM532916)
G013T. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR189782SRR040007(GSM532892)
G601T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR189787SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029128(GSM416757)
H520. (cell line)
TAX577741(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR040024(GSM532909)
G613N. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR343337TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040030(GSM532915)
G013N. (cervix)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR040026(GSM532911)
G220N. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
GSM532888(GSM532888)
G761T. (cervix)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR040006(GSM532891)
G601N. (cervix)
SRR040038(GSM532923)
G531N. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR343334SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)
GSM532889(GSM532889)
G576N. (cervix)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040011(GSM532896)
G529T. (cervix)
GSM532875(GSM532875)
G547N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR191495(GSM715605)
159genomic small RNA (size selected RNA from . (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038859(GSM458542)
MM386. (cell line)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR343335SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
GSM532887(GSM532887)
G761N. (cervix)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
...........................................................................................................................AGGAGCTACAGTCCCCGGT............................................................................................................ 191.000.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................TTCCGGGGGGAGTATGGCCC............................................................................................................................................................................. 2011.000.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGATGACATAACAAAGAAT.. 191.000.00--------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................CGGAAAGGATACACTGCT............................................................................................................................................................................................ 1820.500.50-------------------------------------------------------------------------------------------------------------------0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------