ID: uc003xdn.1_intron_0_0_chr8_23386726_f.5p
GENE: SLC25A37(1)
chr8:23386676-23386925+


(1)
AGO1.ip
(1)
AGO2.ip
(1)
B-CELL
(6)
BRAIN
(10)
BREAST
(10)
CELL-LINE
(4)
CERVIX
(2)
HEART
(3)
HELA
(1)
KIDNEY
(8)
LIVER
(1)
OTHER
(14)
SKIN
(1)
TESTES

Sense strand
TGGCCGGGATCCTGGAGCACTCGGTCATGTACCCGGTGGACTCGGTGAAGGTGAGGCGCGGGGAGACTTCGGGGACGCAACGAGCGGAGAAGGAGCGCGCGCGCGCATTTGCATCCCGCGCGCCGGCAGCCTCGGGGCAGCGTCCCGAAACCGAGCTCTCCCCAGGACCGCGGCTGGCCGGGGTCGCCCCAGGAGCAGCTGCGCGCAGCCTGGGCGCCGCGCCTTCCGCCGACCCCGCGAGGGTGCCCGG
.....................................................................................(((((.((.((.((.((((((...........))))))))))....(((((((...)))))))..))....)))))....((((.(((....))).)))).................................................................
.................................................................................82...........................................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
GSM532876(GSM532876)
G547T. (cervix)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
........................................................................................................................................................................CGCGGCTGGCCGGGGCGCC...............................................................1966.000.0028.0022.0010.00----2.00---2.00-----------------------------1.00--1.00-----------------
........................................................................................................................................................................CGCGGCTGGCCGGGGCGC................................................................1810.000.004.004.00-2.00----------------------------------------------------------
..........................................................................................................................................................................................................................................CCGCGAGGGTGCCCGGGC185.000.00------------1.00-----1.00-----------1.00---------------------------1.001.00--
........................................................................................................................................................................CGCGGCTGGCCGGGGGGCC...............................................................194.000.003.001.00------------------------------------------------------------
...........................................................................................................................................................................................................................................CGCGAGGGTGCCCGGGC173.000.00----3.00---------------------------------------------------------
..................................GGTGGACTCGGTGAAGAC......................................................................................................................................................................................................1813.001.00---------2.00-------1.00--------------------------------------------
.......................................................................................................................................................................CCGCGGCTGGCCGGGGCGCC...............................................................203.000.001.00------1.00-------------------------------------------1.00----------
.........................CATGTACCCGGTGGACTCGGTG...........................................................................................................................................................................................................2212.002.00---------------------1.00--------------------------------1.00-------
.............................TACCCGGTGGACTCGAGGT..........................................................................................................................................................................................................192.000.00------------------------------------------------1.00----1.00--------
.........................................................................................................................................................................................................................................CCCGCGAGGGTGCCCGGGCA2012.001.00------1.00--------------------------------------------------1.00----
..........................................................................................................................................................................................................................................CCGCGAGGGTGCCCGGGCA192.000.00------------------------1.00-----------------------------------1.00-
.....................CGGTCATGTACCCGGTGGAC.................................................................................................................................................................................................................2012.002.00--------2.00-----------------------------------------------------
..................ACTCGGTCATGTACCCGGTGGACTCGGTGAAGACAC....................................................................................................................................................................................................3612.001.00---2.00----------------------------------------------------------
.........................................................................................................................................................................................................................................CCCGCGAGGGTGCCCGGGC1912.001.00------1.00-------------------1.00-----------------------------------
......................................................................................GAGAAGGAGCGCGCGCGCGCAT..............................................................................................................................................2212.002.00----------------2.00---------------------------------------------
........................................................................................................................................................................CGCGGCTGGCCGGGGCGGC...............................................................192.000.00--2.00-----------------------------------------------------------
..................................GGTGGACTCGGTGAAGACAC....................................................................................................................................................................................................2012.001.00---------------1.00-----------1.00----------------------------------
...................................GTGGACTCGGTGAAGACAC....................................................................................................................................................................................................191.000.00-------------------------------------------------------1.00------
......................................................................................................................................................................ACCGCGGCTGGCCGGGGT..................................................................1811.001.00-------------------------------------------1.00------------------
............................................................................................................TTGCATCCCGCGCGCCGG............................................................................................................................1811.001.00--------------1.00-----------------------------------------------
...................CTCGGTCATGTACCCGGTGGACT................................................................................................................................................................................................................2311.001.00--------------------------------------------------1.00-----------
.........................................................................................................................................CAGCGTCCCGAAACCGAGCTCTCCCCAGGACC.................................................................................3211.001.00------------1.00-------------------------------------------------
...........................TGTACCCGGTGGACTCGGTGAAGAC......................................................................................................................................................................................................251.000.00-------------------------------------1.00------------------------
............................GTACCCGGTGGACTCGGTGAAGAC......................................................................................................................................................................................................241.000.00-----------------1.00--------------------------------------------
........................................................................................................................................................................CGCGGCTGGCCGGGGGGAT...............................................................191.000.00-------------------------1.00------------------------------------
...............................................................................................................................................................................................GGAGCAGCTGCGCGCGCA.........................................181.000.00---------------------------------------------1.00----------------
.......................................................................................................................................................................CCGCGGCTGGCCGGGGCGC................................................................191.000.00------------------------------------------1.00-------------------
..........................ATGTACCCGGTGGACTCGGTGAAGACAC....................................................................................................................................................................................................281.000.00-----1.00--------------------------------------------------------
.......................GTCATGTACCCGGTGGACTCG..............................................................................................................................................................................................................2111.001.00-----1.00--------------------------------------------------------
..............................................................................AACGAGCGGAGAAGGAGCG.........................................................................................................................................................1911.001.00----------------------------------1.00---------------------------
.......................................................................................................................................................................CCGCGGCTGGCCGGGGTGTCG..............................................................211.000.00---------------1.00----------------------------------------------
..................ACTCGGTCATGTACCCGGTGGACTCGGTGAAG........................................................................................................................................................................................................3211.001.00----------------------------------------------1.00---------------
................................CCGGTGGACTCGGTGAAGACAC....................................................................................................................................................................................................221.000.00--------------------------------------1.00-----------------------
........................................................................................................................................................................CGCGGCTGGCCGGGGGTCC...............................................................191.000.001.00-------------------------------------------------------------
..................................GGTGGACTCGGTGAAG........................................................................................................................................................................................................1611.001.00-----1.00--------------------------------------------------------
........................................................................................................................................................................CGCGGCTGGCCGGGGCGG................................................................181.000.00-------------------------------------------------1.00------------
.....................CGGTCATGTACCCGGTGGACTCGGTGAAG........................................................................................................................................................................................................2911.001.00-----------------------------------1.00--------------------------
..................................................................................................................................................................................................................TGGGCGCCGCGCCTTCCGCCGA..................2211.001.00----------------------------------------1.00---------------------
........................TCATGTACCCGGTGGACTCGGTT...........................................................................................................................................................................................................231.000.00-------------------------------1.00------------------------------
........................TCATGTACCCGGTGGACTCT..............................................................................................................................................................................................................201.000.00----------------------1.00---------------------------------------
.............................TACCCGGTGGACTCGTGT...........................................................................................................................................................................................................181.000.00----------------------------1.00---------------------------------
..........................................................................................................................................................................................................................................CCGCGAGGGTGCCCGGG171.000.00------------------1.00-------------------------------------------
........................................................................................................................................................................CGCGGCTGGCCGGGGGGGC...............................................................191.000.00-1.00------------------------------------------------------------
.........................................................................................................................................................................................................................................CCCGCGAGGGTGCCCCGGG191.000.00----------------------------------------------------1.00---------
...................................GTGGACTCGGTGAAGACA.....................................................................................................................................................................................................181.000.00--------------------------------------------------------1.00-----
..........................................................................................................................................................................................................................................CCGCGAGGGTGCCCGGGCAC201.000.00------1.00-------------------------------------------------------
...................................................................................................................CCGCGCGCCGGCAGCGGGG....................................................................................................................191.000.00-------------1.00------------------------------------------------
...................................................TGAGGCGCGGGGAGAGTGT....................................................................................................................................................................................191.000.00-----------------------------1.00--------------------------------
..................................GGTGGACTCGGTGAAGACA.....................................................................................................................................................................................................1911.001.00------------------------------------1.00-------------------------
........................................................................................................................................................................CGCGGCTGGCCGGGGGGGT...............................................................191.000.00-1.00------------------------------------------------------------
....................TCGGTCATGTACCCGGTG....................................................................................................................................................................................................................1811.001.00--------------------1.00-----------------------------------------
.........................................................................................................................................................................................................................................CCCGCGAGGGTGCCCGG1711.001.00-------------1.00------------------------------------------------

Antisense strand
TGGCCGGGATCCTGGAGCACTCGGTCATGTACCCGGTGGACTCGGTGAAGGTGAGGCGCGGGGAGACTTCGGGGACGCAACGAGCGGAGAAGGAGCGCGCGCGCGCATTTGCATCCCGCGCGCCGGCAGCCTCGGGGCAGCGTCCCGAAACCGAGCTCTCCCCAGGACCGCGGCTGGCCGGGGTCGCCCCAGGAGCAGCTGCGCGCAGCCTGGGCGCCGCGCCTTCCGCCGACCCCGCGAGGGTGCCCGG
.....................................................................................(((((.((.((.((.((((((...........))))))))))....(((((((...)))))))..))....)))))....((((.(((....))).)))).................................................................
.................................................................................82...........................................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
GSM532876(GSM532876)
G547T. (cervix)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
...........................................................................................GGAGCGCGCGCGCGCCGG............................................................................................................................................. 182.000.00----------2.00---------------------------------------------------
............................................................................................................................................................................................................................GCCTTCCGCCGACCCCGCCTCC........ 221.000.00--------------------------------1.00-----------------------------
...................................................................................................................................................AAACCGAGCTCTCCCTTT..................................................................................... 181.000.00---------------------------------------1.00----------------------
...........................................................................................................................................................................................................................CGCCTTCCGCCGACCGGG............. 181.000.00---------------------------------1.00----------------------------
...............................................................................................................................................................CCCCAGGACCGCGGCTGGC........................................................................ 191.000.00--------------1.00-----------------------------------------------
...........................................................................................GGAGCGCGCGCGCGCCCCC............................................................................................................................................ 191.000.00-------------------1.00------------------------------------------
...............................................................................................................................................................................................................................TTCCGCCGACCCCGCCA.......... 171.000.00-----------------------1.00--------------------------------------
...........................................................................................................................................................CTCTCCCCAGGACCGCGGCTGGCTTT..................................................................... 261.000.00-----------------------------------------------1.00--------------
.......GAGTGCTCCAGGATC.................................................................................................................................................................................................................................... 1520.500.50-------------------------------------------------------------0.50