ID: uc003vdf.2_intron_5_0_chr7_105279057_r.5p
GENE: ATXN7L1(4)
chr7:105279734-105279983-


(5)
B-CELL 		(1)
BRAIN 		(15)
BREAST 		(21)
CELL-LINE 		(5)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(2)
HELA 		(3)
LIVER 		(1)
OTHER 		(26)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
TATTGGATCCCGAGACAAAGAAACCTTGCACAAGATCCCTCACCTGCAAGGTATTTCTCTTTCCATAAAAAATACTTCCTGCTCTCGCTGGGGCCTTTGTCGAAATGTTTGCATGCCACTCTCTGCACACGGCAGGGTGTGGAACCTCGACATGACCCCCAGCTGTTCTTTGTAAGGGAAATGCTTTCTTCTCGTCCATGGTAGCAGAGTGCCTGCCTCAAGCTGGCTGGCTTTTTAAGAAGGAGAAAAA
............................................................................((((((....(((((((....((((((.(((....))).((((.((((((.....)))))).))))....))))))....)))))))........))).)))........................................................................
............................................................................77......................................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040040(GSM532925)
G612N. (cervix)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR038861(GSM458544)
MM466. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040028(GSM532913)
G026N. (cervix)		SRR029129(GSM416758)
SW480. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191535(GSM715645)
181genomic small RNA (size selected RNA from . (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040022(GSM532907)
G575N. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR343335SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		TAX577589(Rovira)
total RNA. (breast)
.................................................................................CTCTCGCTGGGGCCTCCA.......................................................................................................................................................18361.670.6730.334.671.670.672.332.33----1.000.330.330.330.330.33-----------1.00---------0.330.67-0.67-0.670.330.670.670.670.330.330.330.330.330.330.330.330.330.330.330.330.330.33-0.330.330.330.330.330.330.330.330.330.330.33--0.330.330.330.330.330.330.330.330.33----
.................................................................................CTCTCGCTGGGGCCTCC........................................................................................................................................................17311.670.6710.67--------------------------------------0.67---------------------------------0.33--------------
................................................................................GCTCTCGCTGGGGCCTCCA.......................................................................................................................................................197.000.00---2.00---------1.00-1.00----1.00--1.00------------1.00---------------------------------------------------
...................................................................................CTCGCTGGGGCCTTTA.......................................................................................................................................................163.000.00------------1.00---1.00-----1.00-----------------------------------------------------------------
..................................................................................TCTCGCTGGGGCCTTTTTT.....................................................................................................................................................192.000.00-------2.00--------------------------------------------------------------------------------
..................................................................................TCTCGCTGGGGCCTTTT.......................................................................................................................................................172.000.00------2.00---------------------------------------------------------------------------------
.................................................................................CTCTCGCTGGGGCCTCCC.......................................................................................................................................................1831.330.67-----------------------------------------0.67-------------------0.33------------0.33-------------
.........................................................................................................................................................................................................................................TTTAAGAAGGAGAAACAGA191.000.00-------------------------------1.00--------------------------------------------------------
.............................................................................................................................................................................................................................GCTGGCTGGCTTTTTCAC...........181.000.00-------------------1.00--------------------------------------------------------------------
................................................................................GCTCTCGCTGGGGCCTCC........................................................................................................................................................181.000.00---------------------1.00------------------------------------------------------------------
..................................................................................TCTCGCTGGGGCCTTTTT......................................................................................................................................................181.000.00----------------------------------1.00-----------------------------------------------------
........CCCGAGACAAAGAAACCTT...............................................................................................................................................................................................................................1911.001.00--------------1.00-------------------------------------------------------------------------
................................................................................GCTCTCGCTGGGGCCTCCG.......................................................................................................................................................191.000.00--------------------------------1.00-------------------------------------------------------
.................................................................................CTCTCGCTGGGGCCTC.........................................................................................................................................................1631.000.670.67------------------------------------------0.33--------------------------------------------
.....................................................................................................................................................................................................ATGGTAGCAGAGTGCCTG...................................1811.001.00------------------------------1.00---------------------------------------------------------
..................................................................................TCTCGCTGGGGCCTTTATTT....................................................................................................................................................201.000.00-----------1.00----------------------------------------------------------------------------
..................................................................................TCTCGCTGGGGCCTTTA.......................................................................................................................................................171.000.00-----------------------------1.00----------------------------------------------------------
............................................................................................................................................................CCCCAGCTGTTCTTTGTAGAG.........................................................................211.000.00--------1.00-------------------------------------------------------------------------------
...................................................................................................................CCACTCTCTGCACACAAG.....................................................................................................................181.000.00-----------------1.00----------------------------------------------------------------------
..............................................................CCATAAAAAATACTTCCTG.........................................................................................................................................................................1911.001.00------------------------1.00---------------------------------------------------------------
...........................................................................................................................................................................................CTTCTCGTCCATGGTAGCAG...........................................2011.001.00---------1.00------------------------------------------------------------------------------
..................................................................................TCTCGCTGGGGCCTTTGGAC....................................................................................................................................................201.000.00------------------1.00---------------------------------------------------------------------
...............................................................................................................................CACGGCAGGGTGTGGAACCTC......................................................................................................2111.001.00--------------------------1.00-------------------------------------------------------------
............................................................................................................................................................................................................................AGCTGGCTGGCTTTTTTGC...........191.000.00---------1.00------------------------------------------------------------------------------
................................................................................GCTCTCGCTGGGGCCTCCT.......................................................................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------
.................................................................................CTCTCGCTGGGGCCTACA.......................................................................................................................................................1830.670.670.33---------0.33-----------------------------------------------------------------------------
.................................................................................CTCTCGCTGGGGCCT..........................................................................................................................................................1530.670.670.67---------------------------------------------------------------------------------------
...............................................................................................................................CACGGCAGGGTGTGGA...........................................................................................................1620.500.50-------------------------------------0.50--------------------------------------------------
.................................................................................CTCTCGCTGGGGCCTCCAA......................................................................................................................................................1930.330.670.33---------------------------------------------------------------------------------------
..................................................................................TCTCGCTGGGGCCTT.........................................................................................................................................................1590.220.22--------------------------------------0.11----------------------------------------------0.11--
....................AAACCTTGCACAAGA.......................................................................................................................................................................................................................1580.120.12------------------------------------------------------------------------------------0.12---
..................................................................................TCTCGCTGGGGCCTTATTT.....................................................................................................................................................1990.110.22---------------------------------------------------------------------------------------0.11
..................................................................................TCTCGCTGGGGCCTTAA.......................................................................................................................................................1790.110.22--------------------------------------------------------------------------------------0.11-

Antisense strand
TATTGGATCCCGAGACAAAGAAACCTTGCACAAGATCCCTCACCTGCAAGGTATTTCTCTTTCCATAAAAAATACTTCCTGCTCTCGCTGGGGCCTTTGTCGAAATGTTTGCATGCCACTCTCTGCACACGGCAGGGTGTGGAACCTCGACATGACCCCCAGCTGTTCTTTGTAAGGGAAATGCTTTCTTCTCGTCCATGGTAGCAGAGTGCCTGCCTCAAGCTGGCTGGCTTTTTAAGAAGGAGAAAAA
............................................................................((((((....(((((((....((((((.(((....))).((((.((((((.....)))))).))))....))))))....)))))))........))).)))........................................................................
............................................................................77......................................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040040(GSM532925)
G612N. (cervix)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR038861(GSM458544)
MM466. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040028(GSM532913)
G026N. (cervix)		SRR029129(GSM416758)
SW480. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191535(GSM715645)
181genomic small RNA (size selected RNA from . (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040022(GSM532907)
G575N. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR343335SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		TAX577589(Rovira)
total RNA. (breast)
................................................................................................................................................................................................CGTCCATGGTAGCAGAGT........................................ 182.000.00-------------------------1.00--1.00-----------------------------------------------------------
......ATCCCGAGACAAAGAAAAAG................................................................................................................................................................................................................................ 201.000.00-----------------------------------1.00----------------------------------------------------
................AAAGAAACCTTGCACAAGATTT.................................................................................................................................................................................................................... 221.000.00--------1.00-------------------------------------------------------------------------------
..................................................................................................GTCGAAATGTTTGCATGA...................................................................................................................................... 181.000.00---------------------------------1.00------------------------------------------------------