ID: uc003uet.1_intron_1_0_chr7_75912420_f
GENE: SRRM3(2)
chr7:75912370-75912891+


(4)
B-CELL 		(1)
BRAIN 		(8)
BREAST 		(8)
CELL-LINE 		(13)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(1)
KIDNEY 		(2)
LIVER 		(2)
OTHER 		(15)
SKIN

Sense strand
AAGCGGCGCCGGGACTCGCCAAGCTTCATGGAGCCGCGGCGCATCACCAGGTATGGAGGGTCTTGGGGGGGCCGGTGGCGCAGGGCTGGGGCCGCTGACCCGGATCAGGGACAGAGACCTCGGCCCGGGGACCTTCTCTGAGGATCCACTGAACCTGGCACGGGGATGGGGGGGGGTGCTAAGGGACAATGAGTGGGTTCTGCCAGGGTAGGGGGCCAGGGGAGGAGGGGGCTAGAACTGGAGGTGCTGGGGTCTATCAGAGAGACAGGTGCAGGAGGCCACGCAGAAGGAAGGGCCACGGTGGGGGCCTGAGGGCCCATGAAGGGGAGGGGGCTCTGTACTTGGGTCTGGGTGGGCCGCAGCCGGCATGGAATTCAGCTCTGCAAGAGTCCCGCCATCCCTCCGGAGCCCCTCCCGCCCTCCCTGCATCCGTCTCCGGACAATGATGTCTCCTTTTCTCCTTCATCTCAAGGTCCAGCCTGCTGAGTGGCCTGTGGTCAGCCTGGGGGCCAGGCGGACCCC
...............................................................((..(((..((((((....(((((((((...(((.(((......))).)))...))))))))).....((((....))))..))))))..)))..))..........................................................................................................................................................................................................................................................................................................................................................................
............................................................61...................................................................................................162......................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		GSM532880(GSM532880)
G659T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR040019(GSM532904)
G701T. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040031(GSM532916)
G013T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		TAX577742(Rovira)
total RNA. (breast)		SRR191518(GSM715628)
83genomic small RNA (size selected RNA from t. (breast)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR040024(GSM532909)
G613N. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)
.................................................................GGGGGGCCGGTGGCGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................18219.005.50-4.002.002.00---1.001.002.00--2.002.00--------1.00----1.001.00-----------------------------------
.................................................................GGGGGGCCGGTGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1525.505.50----2.50-----1.00------------------------------1.00-------0.500.50-------------
.................................................................GGGGGGCCGGTGGCGGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1825.005.50-1.002.001.00-1.00----------------------------------------------------------
.................................................................GGGGGGCCGGTGGCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1724.005.50----1.001.00-----------------1.00-1.00--------------------------------------
....................................................................GGGCCGGTGGCGCAGTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................193.000.00--------------------1.00-----1.00-----1.00-------------------------------
.................................................................GGGGGGCCGGTGGCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1623.005.50----------1.002.00----------------------------------------------------
..........................................................................................................................................TGAGGATCCACTGAACTCTG............................................................................................................................................................................................................................................................................................................................................................................202.000.00-----------------1.00----------------------------1.00-----------------
.................................................................GGGGGGCCGGTGGCGGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................1922.005.50-1.001.00-------------------------------------------------------------
...............................................................................................................................................................................................AGTGGGTTCTGCCAGAAGT........................................................................................................................................................................................................................................................................................................................192.000.00----------------2.00-----------------------------------------------
..............................................................................................................................................................................................................................AGGAGGGGGCTAGAACTCTG........................................................................................................................................................................................................................................................................................201.000.00-------------------------------------------1.00--------------------
......................................................................................................................................................................................................................................................................AGACAGGTGCAGGAGAT...................................................................................................................................................................................................................................................171.000.00-----------------------------------1.00----------------------------
...................................................................................................................................................................................................................................................................................................................................................ACTTGGGTCTGGGTGGTA.....................................................................................................................................................................181.000.00------------------------------------------------1.00---------------
................................................................................................................................................................................................................................................................................................................................................TGTACTTGGGTCTGGGCCCG......................................................................................................................................................................201.000.00-------1.00--------------------------------------------------------
...........................................................................................................................................................................................................................GGGAGGAGGGGGCTAGGTG............................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------1.00-------------------
............................................................................................................................................................................................................................................................................................................GTGGGGGCCTGAGGGCCCAGTG........................................................................................................................................................................................................221.000.001.00---------------------------------------------------------------
...............................................................................................................................................................ACGGGGATGGGGGGGGGCAGG......................................................................................................................................................................................................................................................................................................................................................211.000.001.00---------------------------------------------------------------
..........................................................................................................................................................................GGGGGGTGCTAAGGGTCT..............................................................................................................................................................................................................................................................................................................................................181.000.00--------1.00-------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................GGGGGCCTGAGGGCCCTGC.........................................................................................................................................................................................................191.000.00---------------------------------------------1.00------------------
....................................................................................................................ACCTCGGCCCGGGGACTGCA..................................................................................................................................................................................................................................................................................................................................................................................................201.000.001.00---------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................CAAGAGTCCCGCCATGGA.........................................................................................................................181.000.00---------------------------------1.00------------------------------
...............................................................................................................................................................ACGGGGATGGGGGGGAGAA........................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------------1.00----------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCCTGTGGTCAGCCTGGGGGCC...........2711.001.00-------------------------------------1.00--------------------------
.................................................................................................................................................................................................................AGGGGGCCAGGGGAGGAGGGGGC..................................................................................................................................................................................................................................................................................................2311.001.001.00---------------------------------------------------------------
................................................................GGGGGGGCCGGTGGCGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------------1.00------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCCGGACAATGAACC.........................................................................181.000.00-------------------1.00--------------------------------------------
...........................................................................................................................................................................................................................GGGAGGAGGGGGCTAGGGG............................................................................................................................................................................................................................................................................................191.000.00---------------1.00------------------------------------------------
...........................ATGGAGCCGCGGCGCAGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------1.00---------------------------------------------------------
....................................................................GGGCCGGTGGCGCAGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------1.00--------------------------------
.................................................................GGGGGGCCGGTGGCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1721.005.50---1.00------------------------------------------------------------
......................................................................................................................................................................................................................GCCAGGGGAGGAGGGTAC..................................................................................................................................................................................................................................................................................................181.000.001.00---------------------------------------------------------------
......................................................................................................................................................................................................................................................CTGGGGTCTATCAGAAC...................................................................................................................................................................................................................................................................171.000.00----------------------------------------1.00-----------------------
...............................................................................................................................................................ACGGGGATGGGGGGGGGCTAG......................................................................................................................................................................................................................................................................................................................................................211.000.001.00---------------------------------------------------------------
....................................................................GGGCCGGTGGCGCAGCTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------1.00---------------------------------------------
........................................................AGGGTCTTGGGGGGGGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------1.00---------------------------
.............................................................................................................................................................GCACGGGGATGGGGGGTCA..........................................................................................................................................................................................................................................................................................................................................................191.000.00-----1.00----------------------------------------------------------
........................................................................................................................................................................................................................................................................................ACGCAGAAGGAAGGGC..................................................................................................................................................................................................................................1611.001.00--------------1.00-------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCAGCCTGGGGGCCAGGCGGACC..2611.001.00--------------1.00-------------------------------------------------
...................................................................................................CCGGATCAGGGACAGTG......................................................................................................................................................................................................................................................................................................................................................................................................................1790.330.11--------------------------------------------------------0.11----0.11-0.11
...................................................................................................CCGGATCAGGGACAGTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................1990.220.11---------------------------------------------------------0.11----0.11-
.................................................................................................................................................................GGGGATGGGGGGGGGTG........................................................................................................................................................................................................................................................................................................................................................1750.200.20------0.20---------------------------------------------------------
..............................................................................................................................................................................................................GGTAGGGGGCCAGGGG............................................................................................................................................................................................................................................................................................................1670.140.14------------------------------------------------------0.14---------
...................................................................................................CCGGATCAGGGACAGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................1890.110.11-------------------------------------------------------0.11--------
...................................................................................................CCGGATCAGGGACAGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................1890.110.11------------------------------------------------------------0.11---
...................................................................................................CCGGATCAGGGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................1590.110.11----------------------------------------------------------0.11-----
...................................................................................................CCGGATCAGGGACAGTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................1990.110.11-----------------------------------------------------------0.11----

Antisense strand
AAGCGGCGCCGGGACTCGCCAAGCTTCATGGAGCCGCGGCGCATCACCAGGTATGGAGGGTCTTGGGGGGGCCGGTGGCGCAGGGCTGGGGCCGCTGACCCGGATCAGGGACAGAGACCTCGGCCCGGGGACCTTCTCTGAGGATCCACTGAACCTGGCACGGGGATGGGGGGGGGTGCTAAGGGACAATGAGTGGGTTCTGCCAGGGTAGGGGGCCAGGGGAGGAGGGGGCTAGAACTGGAGGTGCTGGGGTCTATCAGAGAGACAGGTGCAGGAGGCCACGCAGAAGGAAGGGCCACGGTGGGGGCCTGAGGGCCCATGAAGGGGAGGGGGCTCTGTACTTGGGTCTGGGTGGGCCGCAGCCGGCATGGAATTCAGCTCTGCAAGAGTCCCGCCATCCCTCCGGAGCCCCTCCCGCCCTCCCTGCATCCGTCTCCGGACAATGATGTCTCCTTTTCTCCTTCATCTCAAGGTCCAGCCTGCTGAGTGGCCTGTGGTCAGCCTGGGGGCCAGGCGGACCCC
...............................................................((..(((..((((((....(((((((((...(((.(((......))).)))...))))))))).....((((....))))..))))))..)))..))..........................................................................................................................................................................................................................................................................................................................................................................
............................................................61...................................................................................................162......................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		GSM532880(GSM532880)
G659T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR040019(GSM532904)
G701T. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040031(GSM532916)
G013T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		TAX577742(Rovira)
total RNA. (breast)		SRR191518(GSM715628)
83genomic small RNA (size selected RNA from t. (breast)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR040024(GSM532909)
G613N. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)
..............................................................................................................................................................................................................................................................................................................................................................................CATGGAATTCAGCTCTGGTT........................................................................................................................................ 203.000.00------------------------1.00-----1.00---1.00-----------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTCCCGCCCTCCCTAAA.............................................................................................. 201.000.00------------------------------------------1.00---------------------
..............................................................................................................................................................................................................................AGGAGGGGGCTAGAACTC.......................................................................................................................................................................................................................................................................................... 181.000.00-----------------------------1.00----------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCCCCTCCCGCCATA.................................................................................................... 191.000.00------1.00---------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCTCCCGCCCTCCCGGGG.............................................................................................. 211.000.00--------------------------------------1.00-------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGGTCCAGCCTGC....................................... 171.000.00---------------------1.00------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGAGACGGATGCAGGGAGGGC................................................................................... 2311.001.00---------------1.00------------------------------------------------
.........................................................................................................................................................................................................................................CCAGCACCTCCAGTTCT................................................................................................................................................................................................................................................................................ 1730.330.33---------------------------------------------------0.33------------
..............................................................................................................................................................................................................TCCCCTGGCCCCCTACC........................................................................................................................................................................................................................................................................................................... 1740.250.25-----------------------------------------------------0.25----------
.........................................................................................................................................TTCAGTGGATCCTCAG................................................................................................................................................................................................................................................................................................................................................................................. 1640.250.25----------------------------------------------------0.25-----------
...................................................................................................................................................................................................TACCCTGGCAGAACC........................................................................................................................................................................................................................................................................................................................ 1560.170.17-----------------0.17----------------------------------------------