ID: uc003sus.3_intron_5_0_chr7_20210402_r.3p
GENE: (1)
chr7:20210352-20210601-


(3)
CELL-LINE 		(1)
CERVIX 		(1)
LIVER 		(7)
OTHER 		(3)
SKIN 		(1)
XRN.ip

Sense strand
AGATGTAATCAATTGTTGAGAATTTAAGGGAAATTCCTGCTGTATGAATTGGATGGTGTGGTGTAATGAGTCTCTCTTTAATCTTACCCATTCTACCAAATTTTATTCATAAGCTCTTTCTCATAGCAAACGTTAGTGCATAAACATTCTGTTTTCACTTAACAGTGACCAAAGATTCATGTTTATTCTCTTTCAAGTAGGTAGCCTTGTCAGATGATATGCAAATGATTCACATCAGTGTTTGAAGTTC
..................................................................................................((((((..((((..(((.........)))....(((((((...((((.....)))).)))).))).))))...)))))).........................................................................
..............................................................................................95...................................................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR343335SRR343334SRR189784SRR343336SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343337SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................ATTTTATTCATAAGCTAATG...................................................................................................................................2043.000.0010.0012.0013.006.00--2.00--------
....................................................................................................TTTTATTCATAAGCTAATG...................................................................................................................................198.000.003.005.00-------------
....................................................................................................TTTTATTCATAAGCTAAAT...................................................................................................................................195.000.004.001.00-------------
...................................................................................................ATTTTATTCATAAGCTAAT....................................................................................................................................194.000.002.00-2.00------------
...................................................................................................ATTTTATTCATAAGCTAACG...................................................................................................................................202.000.002.00--------------
...........ATTGTTGAGAATTTAAGG.............................................................................................................................................................................................................................1822.002.00--------1.00-1.00----
.....................................TGCTGTATGAATTGGGAGA..................................................................................................................................................................................................191.000.00-------1.00-------
...............................................ATTGGATGGTGTGGTGTGGG.......................................................................................................................................................................................201.000.00-----1.00---------
...................................................................................................ATTTTATTCATAAGCTACTG...................................................................................................................................201.000.00--1.00------------
..............................................................................................................................................................TTAACAGTGACCAAATTG..........................................................................181.000.00----1.00----------
....................................................................................................TTTTATTCATAAGCTAGTG...................................................................................................................................191.000.001.00--------------
.................................................................................................AAATTTTATTCATAAGCTTGGC...................................................................................................................................221.000.00-----------1.00---
............TTGTTGAGAATTTAAGGGAAC.........................................................................................................................................................................................................................211.000.00------------1.00--
.....................................................TGGTGTGGTGTAATGACGA..................................................................................................................................................................................191.000.00---------1.00-----
...................................................................................................ATTTTATTCATAAGCTAATA...................................................................................................................................201.000.00--1.00------------
...........ATTGTTGAGAATTTAAG..............................................................................................................................................................................................................................1740.250.25--------------0.25

Antisense strand
AGATGTAATCAATTGTTGAGAATTTAAGGGAAATTCCTGCTGTATGAATTGGATGGTGTGGTGTAATGAGTCTCTCTTTAATCTTACCCATTCTACCAAATTTTATTCATAAGCTCTTTCTCATAGCAAACGTTAGTGCATAAACATTCTGTTTTCACTTAACAGTGACCAAAGATTCATGTTTATTCTCTTTCAAGTAGGTAGCCTTGTCAGATGATATGCAAATGATTCACATCAGTGTTTGAAGTTC
..................................................................................................((((((..((((..(((.........)))....(((((((...((((.....)))).)))).))).))))...)))))).........................................................................
..............................................................................................95...................................................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR343335SRR343334SRR189784SRR343336SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343337SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................................TGGTGTGGTGTAATGAG.................................................................................................................................................................................... 171.000.00----1.00----------
......................................................................................CCCATTCTACCAAATGGTT................................................................................................................................................. 191.000.00-----1.00---------
.............................................................................................................................................GTGAAAACAGAATGTTT............................................................................................ 1730.330.33-------------0.33-