ID: uc003qlg.1_intron_10_0_chr6_146248414_r.3p
GENE: SHPRH(13)
chr6:146248364-146248613-


(1)
AGO1.ip
(1)
AGO2.ip
(7)
B-CELL
(11)
BRAIN
(23)
BREAST
(27)
CELL-LINE
(5)
CERVIX
(5)
HEART
(1)
HELA
(15)
LIVER
(1)
OTHER
(1)
RRP40.ip
(28)
SKIN
(4)
UTERUS

Sense strand
TGGAATTAAAAAAGGAACTGTACTCAGCCTTTTTTAAAACTTGGGCAATCATATTAATACCAAGTCAAATTTCTTTACTTAAAAAAAGTTATAATCATTACATTTTATTTTTACAGTATTCTTAAATAATGGACAACTAGATGACATTGGGAACTAAATATGTGACTCTCGTATGCTTTAAATACATTTTAATTCTTTAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAAGTGTTGCGCTCCTCG
.................................................................................................((((((((((.((((.((((..(((................)))....)))))))).)))).)))))).....................................................................................
.........................................................................................90.............................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR189787SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR189786SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
TAX577580(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR029127(GSM416756)
A549. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038857(GSM458540)
D20. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
TAX577588(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR191463(GSM715573)
111genomic small RNA (size selected RNA from . (breast)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR040015(GSM532900)
G623T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................................................................................................................AGCAGAATTGTACAGGG.................17647.670.1715.6714.679.506.67--0.50-0.33------------------------------------------0.17--------------------------------------------0.17---------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGC................18634.670.173.173.332.332.175.000.174.000.170.830.50------0.830.330.67-----0.50-1.171.33--------------------0.670.500.17--0.17--0.170.170.83--------------------------------0.670.500.170.330.50-0.330.330.500.330.170.17----0.33--0.17-0.170.17---------0.170.17-0.170.17--
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGCTAT.............2128.000.00-----3.00-1.00--1.00--2.00---1.00-2.00--1.00--1.00---2.00---1.00--1.001.00-1.00--2.00--------1.00-1.001.001.00-1.00-----------1.00------------1.00------1.00----------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGCT...............19627.330.171.331.171.170.834.000.504.331.332.83-0.83--0.33----0.33-----0.170.330.170.83-0.17------------------0.170.330.33-0.17-0.17---0.17--------------------------------0.170.170.330.330.170.330.170.17--0.170.170.330.170.330.33-0.33--0.33--0.170.170.17-0.170.170.17-0.17--0.17----
.........................................................................................................................................TAGATGACATTGGGAACTAAATATGTGA.....................................................................................28111.0011.00------------3.00--------1.00----------1.00-1.00---1.00-----1.00-----------------------------1.00---------1.00--1.00------------------------------------------
.......................................................................................................................................................................................................................CAGCAGAATTGTACAGG..................1710.000.004.002.003.001.00------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGT.................1765.500.172.501.330.830.83------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGATATG............2215.001.00-------1.00--1.00-----------------------------------------1.00---1.00-------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGAAATGA...........234.000.00--------------1.00--------1.00--------------------------1.00--------------1.00----------------------------------------------------------------
.............................................................................................................................................TGACATTGGGAACTAAATATGTGA.....................................................................................2414.004.00-------------------------------------------1.001.00--1.00------------1.00---------------------------------------------------------------------
..................................................................................................................................................TTGGGAACTAAATATGTGA.....................................................................................1914.004.00---------------1.00----1.00---------1.00-------------------------------------1.00-------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGCT...............194.000.00-------1.001.00-------1.00-------------------------------1.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGATAT.............2114.001.00-----2.00--------1.00-------------1.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................GACATTGGGAACTAAATATGTGA.....................................................................................2314.004.00--------------------2.00----------------------1.00-1.00------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGG................1863.000.170.33--0.331.17-----------0.33-------0.50-0.17-----------------------------------------------------------------0.17-------------------------------------
...................................................................................................................................................TGGGAACTAAATATGTGA.....................................................................................1813.003.00---------------------1.00--------1.00------------------------------------------------1.00--------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGATA..............2013.001.00-----1.00---1.00-----------------------------1.00------------------------------------------------------------------------------------------
...............................................................................................................................................ACATTGGGAACTAAATATGTGA.....................................................................................2213.003.00---------------2.00---------------------------------------------1.00--------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGCTA..............203.000.00-----2.00-1.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................AGATGACATTGGGAACTAAATATGTGA.....................................................................................2713.003.00---------------------------------------------1.00----------------1.00-----------------1.00-------------------------------------------------
.......................................................................................................................................................................................................................CAGCAGAATTGTACAGGG.................183.000.002.00-----------------------1.00---------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CAGCAGAATTGTACAGGGC................193.000.00--1.00-1.00-----------1.00-----------------------------------------------------------------------------------------------------------------
........................................................................................................................................CTAGATGACATTGGGAACTAAATATGTGA.....................................................................................2913.003.00---------------1.00----------------1.00-1.00-----------------------------------------------------------------------------------------------
............................................................................................................................................ATGACATTGGGAACTAAATATGTGA.....................................................................................2513.003.00------------2.00------------------------------------------------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGATAA.............2112.001.00-----1.00-----------------------------1.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGAACTGA...........232.000.00-----------------------2.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................AACTAGATGACATTGGGAACTAAATATGTGA.....................................................................................3112.002.00--------------------------------------1.00-1.00-----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGCTAC.............212.000.00----------------------1.00-------------------------------------------------1.00---------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGATATT............2212.001.00----------------------------1.00---------------------------------------------------------1.00-------------------------------------------
.......................................................................................................................................ACTAGATGACATTGGGAACTAAATATGTGA.....................................................................................3012.002.00----------------------------------------------1.00--------------------1.00--------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGAAAT.............212.000.00-----1.00---1.00------------------------------------------------------------------------------------------------------------------------
...........AAGGAACTGTACTCAGCC.............................................................................................................................................................................................................................1812.002.00-------------------------------2.00--------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGCTGT.............212.000.00------------------------------------1.001.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGTTA..............202.000.00----------1.00---1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGAT...............1961.330.17-0.170.17---0.17-----------------0.17--0.17-----------------------0.17----------------------------------------0.170.17------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGGT...............1961.170.17----0.50-0.17---------0.33-------0.17---------------------------------------------------------------------------------------------------------
................................................................................................................................ATGGACAACTAGATGACATTGGGA..................................................................................................2411.001.00--------------------------1.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGAAACGA...........231.000.00-----------1.00----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGATGT.............2111.001.00-------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GTACAGAGAAGTGTTCACA......191.000.00-----------------------------------1.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGA................1811.001.00---------1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGCCA..............201.000.00-------------1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGTGA..............201.000.00-----------------------------------------------------------------------1.00----------------------------------------------------------
.........AAAAGGAACTGTACTCAGCC.............................................................................................................................................................................................................................2011.001.00------------------------------------------------------------------1.00---------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGACATG............2211.001.00-----------1.00----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGATC................181.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................GTGACTCTCGTATGCTTTAAAT...................................................................2211.001.00---------------------------------------------------------------------------1.00------------------------------------------------------
.......................................................................................................................................................................................................................CAGCAGAATTGTACAGGT.................181.000.00---------1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................TTATAATCATTACATTTTATTTTTACAG......................................................................................................................................2811.001.00----------------------------------------------------------------------------------------1.00-----------------------------------------
.................................................................................................................................................ATTGGGAACTAAATATGTGA.....................................................................................2011.001.00-----------------------------------------------------------------------------------1.00----------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGTTAA.............211.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGACACG............2211.001.00-----------1.00----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACTAGATGACATTGGGAACTAAATATGTGACTC..................................................................................3311.001.00---------------------------------------------------------------1.00------------------------------------------------------------------
................................................................................................................................................CATTGGGAACTAAATATGTGA.....................................................................................2111.001.00----------------------------------------------------------------1.00-----------------------------------------------------------------
..............................................................................................................................................GACATTGGGAACTAAATATGTGACTC..................................................................................2611.001.00----------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TATGTGACTCTCGTATGCTTTAAATA..................................................................2611.001.00------------------1.00---------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGCTCT.............211.000.00---------------------------------------------------------------------------------1.00------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGATACG............2211.001.00-----------1.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TAAATAATGGACAACTAGATGACA........................................................................................................2411.001.00-----------------------------------------------------------1.00----------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGAAGTT............221.000.00-----------1.00----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGATAG.............2111.001.00-----------------------------------------1.00----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CAGCAGAATTGTACAGAGAGAT.............221.000.00-------------------------------------------------------------------------------------1.00--------------------------------------------
..........................................................................................................................................AGATGACATTGGGAACTAAA............................................................................................2011.001.00------------------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGGAACTAAATATGTGA.....................................................................................1711.001.00----------------------------------------1.00-----------------------------------------------------------------------------------------
............................................................................................................................................ATGACATTGGGAACTAAATATGTG......................................................................................2411.001.00----------------------------------------------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGCTTT.............211.000.00-------------1.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CATTGGGAACTAAATATGTGACTC..................................................................................2411.001.00-----------------------------------------1.00----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGATCTA..............201.000.00-------1.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................TCATTACATTTTATTTTTATTTA.....................................................................................................................................231.000.00------------------------------------------------------------------------------------------1.00---------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGGTA..............201.000.00--------------1.00-------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................ATATGTGACTCTCGTGTT...........................................................................181.000.00-------------------1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGGTAT.............211.000.00---------------------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................AGTGTTGCGCTCCTCAGCG191.000.00------------------------------------------------------------------------------1.00---------------------------------------------------
...........................................................................................................................................GATGACATTGGGAACTAAATATGTGA.....................................................................................2611.001.00-----------------------------------------------------------------------------1.00----------------------------------------------------
...............................................................................................................................................................................................................TGCCTTGGCAGCAGAATTGTACAGAGAAGTGT...........3211.001.00-----------------------------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................AGAGAAGTGTTGCGCTCC...1811.001.00---1.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................TGGACAACTAGATGACATTGGGA..................................................................................................2311.001.00---------------------1.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGCTGA.............211.000.00---------1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGACCTA..............201.000.00----------------------------------------------------------------------1.00-----------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGAGATATC............2211.001.00-------------------------------------------------1.00--------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGA................1861.000.17----0.33----0.17------------------------------------------0.17---------------------------------------------------------0.17----------0.17--------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGTCT...............1960.670.17---0.170.17-0.170.17--------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGTT...............1960.670.17--0.17---0.17-0.17---------0.17---------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGT................1860.670.17-0.17--0.33---0.17-------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGTG................1860.500.17--0.17-------------0.170.17----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GGAACTAAATATGTGA.....................................................................................1630.330.33-------------------------------------------------------------------------------------------------------------0.33--------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGTGCT...............1960.330.17--0.17---------------------------------------------------------------------------------------------0.17---------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGACT...............1960.330.17--0.17---------------0.17---------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGTGC................1860.330.17-0.17--0.17-----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGCG...............1960.330.17--------0.17----------------------------------------------------------------------------------0.17--------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGCTA................1860.330.17-----------------0.33----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGTC................1860.330.170.17--0.17------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGA.................1760.330.17---0.17---------------0.17--------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGAA...............1960.330.17---------------------------------------------------------------------------------------------------------------------0.17----------0.17-
........................................................................................................................................................................................................................AGCAGAATTGTACAGTGCG...............1960.170.17----------------------------------------------------------0.17-----------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGCA...............1960.170.17-------------------------0.17--------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGCC...............1960.170.17-------0.17--------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGAG...............1960.170.17--------0.17-------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGCAT................1860.170.17-----------------0.17----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGTTT...............1960.170.17---0.17------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGTGAT...............1960.170.17--------0.17-------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGTTG................1860.170.17-----------------0.17----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAG...................1560.170.17-----------------0.17----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGTTCC...............1960.170.17----------0.17-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGCAA...............1960.170.17----------------------------0.17-----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGAG................1860.170.17----0.17-----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGTGT...............1960.170.17--0.17-------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGGTG...............1960.170.17-0.17--------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGCGA................1860.170.17--------------------------------------------------------------------------------------------------------0.17-------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGTGGC...............1960.170.17----0.17-----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGTGCC...............1960.170.17------------------------0.17---------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGTTC................1860.170.17-----------------0.17----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGCC.................1760.170.17-------------------------------------------------------0.17--------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGCTGT...............1960.170.17-----------------0.17----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGAC................1860.170.17------------------0.17---------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCAGAATTGTACAGGTCG...............1960.170.17----------0.17-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................GAACTAAATATGTGA.....................................................................................1590.110.11---------------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
TGGAATTAAAAAAGGAACTGTACTCAGCCTTTTTTAAAACTTGGGCAATCATATTAATACCAAGTCAAATTTCTTTACTTAAAAAAAGTTATAATCATTACATTTTATTTTTACAGTATTCTTAAATAATGGACAACTAGATGACATTGGGAACTAAATATGTGACTCTCGTATGCTTTAAATACATTTTAATTCTTTAGGTGAGTATGCCTTGGCAGCAGAATTGTACAGAGAAGTGTTGCGCTCCTCG
.................................................................................................((((((((((.((((.((((..(((................)))....)))))))).)))).)))))).....................................................................................
.........................................................................................90.............................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR189787SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR189786SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
TAX577580(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR029127(GSM416756)
A549. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038857(GSM458540)
D20. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
TAX577588(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR191463(GSM715573)
111genomic small RNA (size selected RNA from . (breast)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR040015(GSM532900)
G623T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
.................CTGTACTCAGCCTTTTCAGG..................................................................................................................................................................................................................... 201.000.00----------------------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................................................................TGTGACTCTCGTATGCCGG....................................................................... 191.000.00-----------------1.00----------------------------------------------------------------------------------------------------------------