ID: uc003lcn.2_intron_1_0_chr5_137589065_r
GENE: (6)
chr5:137589015-137589504-


(1)
AGO2.ip
(1)
B-CELL
(2)
BRAIN
(5)
BREAST
(3)
CELL-LINE
(3)
CERVIX
(2)
HEART
(2)
LIVER
(2)
OTHER
(28)
SKIN
(1)
UTERUS

Sense strand
GGAGGAGTGTGAAATGCTGGAAGGGTTCTTCTCCCACAACCCCTGCCTCAGTGAGTGTGCTGTACTTGCTCCCAGCCCCTGGGGCTGAGTCAGCTGGACTCAAGGGAAGGAAAAGGGTCGACTCTGTGGCCCAGGCTGGTTCCATCCATCTCCACCAAACAGAGCAGTTCCTAGCATAGGCTTTCATTGCCATAGCCCAGGCCTTTCTTCTGTCTCCCACTCCCTGAGAAACCTCCCACGCTGCCTGTTCAACCTGTCTGGAACCCAGGGACATCTCCAGCTCAAGAAACAAGCAGAATGAGAGAGTATCCCACTTCCACCTCCCACCCACTTGCTCCCCTATAGCCCAGGGTCCCTGTGGCATTCCCTTTCCTTCCTTGGGAGCCTGAGAAATCTCCTGCCCCCATACCCTTCCAATGAGCCTTCTCTCCTCTCTTCAGCGGAGGCCATTGCAGCTAAGATGCGTTTTCACAGCCAACTCTTCTCCCAG
.............................................................................................................................................................................................................................................................................................................................................((((((.....(((((((...)))).))).................))))))..(((....))).............................................................................................
............................................................................................................................................................................................................................................................................................................................317.................................................................................401.......................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189782SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
GSM532879(GSM532879)
G659N. (cervix)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................................................................................................................................................................................................................................................................................................TGGGAGCCTGAGAAACGGC.............................................................................................1943.000.0029.00-1.00-1.00-2.001.00-1.00---1.00--2.00-1.00--1.00---1.00---1.00------------------1.00
..........................................................................................................................................................................................................................................................................................................................................................................................TGGGAGCCTGAGAAACGG..............................................................................................1814.000.00---1.00----2.001.00--2.00--2.00--1.00-------1.001.00-------1.001.00---1.00--------
..........................................................................................................................................................................................................................................................................................................................................................................................TGGGAGCCTGAGAAACG...............................................................................................1713.000.00--1.00-2.001.00----2.002.00-1.00----------1.00--------1.00---------1.001.00----
.........................................................................................................................................................................................................................................................................................................................................................................................TTGGGAGCCTGAGAAACGGC.............................................................................................201.000.00------------------------------------------1.00------
.................................................................................................................................................................................................................................................................................................................................TCCCACCCACTTGCTCCCCTATAGC................................................................................................................................................2511.001.00--1.00----------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TTGGGAGCCTGAGAAACG...............................................................................................181.000.00---1.00---------------------------------------------
.................................................................................................................................................................................................................................................................................................................GTATCCCACTTCCACT.........................................................................................................................................................................161.000.00--------------------1.00----------------------------
....................................................................................................CAAGGGAAGGAAAAGGGTCGACT...............................................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------1.00----------------
................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTCCTTGGGATCCG.......................................................................................................191.000.00-------------------------------1.00-----------------
........................................................................................................................................................................................................................................................................................................................................................................................CTTGGGAGCCTGAGAAACGG..............................................................................................201.000.00-------1.00-----------------------------------------
...........................................................................................................................................................................................................................................................................................................................TCCACCTCCCACCCACCAG............................................................................................................................................................191.000.00--------------1.00----------------------------------
.................................................................................................................................................................................................................................GAGAAACCTCCCACGAC........................................................................................................................................................................................................................................................171.000.00--------------------------------------1.00----------
..........................................................................................................................................................................................................................................................................................................................................................................................TGGGAGCCTGAGAAACGTG.............................................................................................191.000.00---------------------------------------------1.00---
...........................................................................................................................................................................................................................................................................................................................................................................................GGGAGCCTGAGAAATAAC.............................................................................................181.000.00-------------------1.00-----------------------------
........................................................................................................................ACTCTGTGGCCCAGGCTGGTCTG...........................................................................................................................................................................................................................................................................................................................................................231.000.00--------------1.00----------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................GGGAGCCTGAGAAATGGTT............................................................................................191.000.00-----1.00-------------------------------------------
................................................................................................................................................................................................................TCTGTCTCCCACTCCCT.........................................................................................................................................................................................................................................................................1750.200.20------0.20------------------------------------------
....................................................................................CTGAGTCAGCTGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................1580.120.12-------0.12-----------------------------------------

Antisense strand
GGAGGAGTGTGAAATGCTGGAAGGGTTCTTCTCCCACAACCCCTGCCTCAGTGAGTGTGCTGTACTTGCTCCCAGCCCCTGGGGCTGAGTCAGCTGGACTCAAGGGAAGGAAAAGGGTCGACTCTGTGGCCCAGGCTGGTTCCATCCATCTCCACCAAACAGAGCAGTTCCTAGCATAGGCTTTCATTGCCATAGCCCAGGCCTTTCTTCTGTCTCCCACTCCCTGAGAAACCTCCCACGCTGCCTGTTCAACCTGTCTGGAACCCAGGGACATCTCCAGCTCAAGAAACAAGCAGAATGAGAGAGTATCCCACTTCCACCTCCCACCCACTTGCTCCCCTATAGCCCAGGGTCCCTGTGGCATTCCCTTTCCTTCCTTGGGAGCCTGAGAAATCTCCTGCCCCCATACCCTTCCAATGAGCCTTCTCTCCTCTCTTCAGCGGAGGCCATTGCAGCTAAGATGCGTTTTCACAGCCAACTCTTCTCCCAG
.............................................................................................................................................................................................................................................................................................................................................((((((.....(((((((...)))).))).................))))))..(((....))).............................................................................................
............................................................................................................................................................................................................................................................................................................................317.................................................................................401.......................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189782SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
GSM532879(GSM532879)
G659N. (cervix)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
...................................ACAACCCCTGCCTCAATAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................... 193.000.00-3.00-----------------------------------------------
....................................................................................................................................................................................................................TCTCCCACTCCCTGAACTT................................................................................................................................................................................................................................................................... 192.000.00----------------------------------1.00------------1.00-
...........................................................................................................................................................................................................TTTCTTCTGTCTCCCACCT............................................................................................................................................................................................................................................................................ 191.000.00-----------------------1.00-------------------------
..........................................................................................................................................................................................................................................................................................................................TTCCACCTCCCACCCAAT.............................................................................................................................................................. 181.000.00---------------------------------------1.00---------
...........................................................CTGTACTTGCTCCCAATTG............................................................................................................................................................................................................................................................................................................................................................................................................................ 191.000.00-1.00-----------------------------------------------
................................CCCACAACCCCTGCCTTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-------------------------------------1.00-----------
............................................................................................................................................TCCATCCATCTCCACTGGT........................................................................................................................................................................................................................................................................................................................................... 191.000.00----------------------------------------------1.00--
...............................................................ACTTGCTCCCAGCCCCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................ 191.000.00-----1.00-------------------------------------------
........................................................................................................................................................................................................CAGGGAGTGGGAGACAGAAGAAAGGC........................................................................................................................................................................................................................................................................ 2611.001.00----------------------------1.00--------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCCAACTCTTCTGTTA. 201.000.00-----------------1.00-------------------------------
..........................................................................................................................................GTTCCATCCATCTCCTCTG............................................................................................................................................................................................................................................................................................................................................. 191.000.00-----------------------------------------1.00-------
.............................................................................................................................................CCATCCATCTCCACCAAGC.......................................................................................................................................................................................................................................................................................................................................... 191.000.00------------------------------1.00------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAGGGTATGGGGGCAGGAGA........................................................................ 2511.001.00---1.00---------------------------------------------
..................................................................................................................................................................................................................................................................................................................................CCCACCCACTTGCTCCCTGA.................................................................................................................................................... 201.000.00-----------------1.00-------------------------------
................................................................................................................................................TCCATCTCCACCAAAGATG....................................................................................................................................................................................................................................................................................................................................... 191.000.00----------------------1.00--------------------------
........................................................................................................................................................................................CTGGGCTATGGCAATG.................................................................................................................................................................................................................................................................................................. 1640.250.25-------------------0.25-----------------------------