ID: uc003kbn.1_intron_14_0_chr5_70798619_f.5p
GENE: BDP1(15)
chr5:70798569-70798818+


(4)
AGO2.ip 		(2)
B-CELL 		(3)
BRAIN 		(2)
BREAST 		(18)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(2)
HELA 		(3)
LIVER 		(2)
OTHER 		(6)
SKIN 		(1)
TESTES 		(2)
UTERUS

Sense strand
TTGGGGCCAATGTAGAGAAGAATGAAAATGAATCCTGTGCTGATAGAGATGTAAGTACTCTGATTCCTCCTCACATTTTTGGTAAGCAAGTACATGAGCCTTAATATAAGCTTCCCTTCACCCACATACTTACATACATACATACATACATTTATTTATTTATTTATGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAATGCAGTGTCGCGATCTTGCCTCACTGCAACCTCTGCCACCCAGGTTCAAGT
....................................................................((..........((.((((...((.((........)).)).)))).))................((((.(((.(((.(((....))).))).))).))))..))..............................................................................
....................................................................69.....................................................................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343336SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105752CONTROL(GSM1105752)
small RNA sequencing data. (hela)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
...............................................................................................................................................ACATACATTTATTTATTTATTTTTG..................................................................................2519.000.007.002.00-5.00-5.00-----------------------------------------
.........................................................................CATTTTTGGTAAGCAGAAC..............................................................................................................................................................1916.000.00-------4.00-2.003.00-----1.00--1.00-1.00---1.00----1.001.00---------1.00-----
...................................................................................................................................................ACATTTATTTATTTATTTCTTG.................................................................................224.000.004.00----------------------------------------------
...................................................................................................................................................ACATTTATTTATTTATTCACG..................................................................................214.000.002.002.00---------------------------------------------
....................................................................................................................................................CATTTATTTATTTATTTATCTTG...............................................................................233.000.00-2.00-1.00-------------------------------------------
...............................................................................................................................................ACATACATTTATTTATTTATTCAG...................................................................................242.000.00-2.00---------------------------------------------
...................................................................................................................................................ACATTTATTTATTTATTCTTG..................................................................................212.000.00---1.00-1.00-----------------------------------------
................................................................................................................................................CATACATTTATTTATTTATTTTTG..................................................................................242.000.00---2.00-------------------------------------------
...............................................................................................................................................ACATACATTTATTTATTTATTTATCTAG...............................................................................282.000.001.001.00---------------------------------------------
....................................................................................................................................CATACATACATACATACATTTATTC.............................................................................................252.000.00------------2.00----------------------------------
...................................................................................................................................................ACATTTATTTATTTATTTATCG.................................................................................222.000.00---1.00-----1.00-------------------------------------
...................................................................................................................................................ACATTTATTTATTTATTCATG..................................................................................212.000.001.001.00---------------------------------------------
.................................................................................................................................................ATACATTTATTTATTTATTTTCAG.................................................................................242.000.00--2.00--------------------------------------------
...................................................................................................................................................ACATTTATTTATTTATTTATCTTG...............................................................................242.000.00-2.00---------------------------------------------
.................AAGAATGAAAATGAATCCTGTGCTGATAGA...........................................................................................................................................................................................................3012.002.00--------2.00--------------------------------------
..................................................................................................................................................TACATTTATTTATTTATTTATG..................................................................................2291.111.110.440.33-0.22-----------0.11-------------------------------
........................................................................................................................................................................ACGGAGTCTTGCTCTGTCGCCCAGCATG......................................................281.000.00----1.00------------------------------------------
............................TGAATCCTGTGCTGATAG............................................................................................................................................................................................................1811.001.00-------------1.00---------------------------------
.........................................................................CATTTTTGGTAAGCATAAC..............................................................................................................................................................191.000.00------------------------------------1.00----------
...................................................................................................................................................ACATTTATTTATTTATTTATCATG...............................................................................241.000.00--1.00--------------------------------------------
........................................................................................................................................................................................TCGCCCAGGCTGGAATGCGGCA............................................221.000.00----1.00------------------------------------------
..........................................................................................................................................................................................................................CTCACTGCAACCTCTGCCACCGGGC.......251.000.00--1.00--------------------------------------------
......................................................................................................................................................................................TGTCGCCCAGGCTGGAATGCAGGCA...........................................251.000.00--1.00--------------------------------------------
..................................................................................................................................................TACATTTATTTATTTATTCTG...................................................................................211.000.00-1.00---------------------------------------------
........................................................................................................................................................................ACGGAGTCTTGCTCTGTCGCCCAGGGGAG.....................................................291.000.00--1.00--------------------------------------------
............................................................................................................................................................................................................................CACTGCAACCTCTGCCACGCCG........221.000.00--------1.00--------------------------------------
......................................................................................................................................................................................TGTCGCCCAGGCTGGAATGCAGGGCA..........................................261.000.00--1.00--------------------------------------------
...............................................................................................................................................ACATACATTTATTTATTTATTG.....................................................................................221.000.00-1.00---------------------------------------------
................................................................................................................................................CATACATTTATTTATTTATTTG....................................................................................221.000.00-1.00---------------------------------------------
...................................................................................................................................................................................................................ATCTTGCCTCACTGC........................1501.001.00-----------1.00-----------------------------------
...............................................................................................................................................ACATACATTTATTTATTCTTG......................................................................................211.000.001.00----------------------------------------------
.......................................................................................................................................................................GACGGAGTCTTGCTCTGTCGCCCAGGCTGCTGT..................................................331.000.00--------------1.00--------------------------------
...............................................................................................................................................ACATACATTTATTTATTTATCTAT...................................................................................241.000.001.00----------------------------------------------
.......................................CTGATAGAGATGTAAGTACTCTGATTCCTCC....................................................................................................................................................................................3111.001.00-----------------1.00-----------------------------
....................................................................................................................................................CATTTATTTATTTATTGTGG..................................................................................201.000.00---1.00-------------------------------------------
........................................................................................................................................................................................TCGCCCAGGCTGGAATGCAGTGTCGCG.......................................2711.001.00--1.00--------------------------------------------
..................................................................................................................................................TACATTTATTTATTTATTTCTCG.................................................................................231.000.00-1.00---------------------------------------------
.........................................................................CATTTTTGGTAAGCACAA...............................................................................................................................................................181.000.00---------------------------1.00-------------------
...............................................................................................................................................ACATACATTTATTTATTTTTG......................................................................................211.000.00---1.00-------------------------------------------
.............................................................................................................................................................................................................................ACTGCAACCTCTGCCACCCAGGTCCAG..271.000.00--1.00--------------------------------------------
...GGGCCAATGTAGAGAAGAAT...................................................................................................................................................................................................................................2011.001.00-----------------------------------1.00-----------
.............................GAATCCTGTGCTGATAGA...........................................................................................................................................................................................................1811.001.00------------------------1.00----------------------
...................................................................................................................................................ACATTTATTTATTTATTTATCTTA...............................................................................241.000.00-1.00---------------------------------------------
...............................................................................................................................................ACATACATTTATTTATTTTAAG.....................................................................................221.000.00---1.00-------------------------------------------
....................................................................................................................................................CATTTATTTATTTATTTATCTAG...............................................................................231.000.001.00----------------------------------------------
.......................................................................................................................................................................................................................TGCCTCACTGCAACCTCTGCCAGG...........241.000.00--1.00--------------------------------------------
.................................................................................................................................................ATACATTTATTTATTTATTTAGGAG................................................................................251.000.00--1.00--------------------------------------------
...................................................................................................................................................ACATTTATTTATTTATTTCTCG.................................................................................221.000.00---1.00-------------------------------------------
........................................................................................................................................CATACATACATACATTTATTTATTTATTTACG..................................................................................321.000.00-1.00---------------------------------------------
......................................................................................................................................................................................TGTCGCCCAGGCTGGAATGGTGC.............................................231.000.00----1.00------------------------------------------
................................TCCTGTGCTGATAGAGAT........................................................................................................................................................................................................1811.001.00-------------1.00---------------------------------
...........................................................................................................................................................................................................................TCACTGCAACCTCTGCCACCCATAA......251.000.00----------------------------1.00------------------
...........................................................................................................................................................................................................................TCACTGCAACCTCTGCCACCCAGGTTCGAGC311.000.00--------------------------------1.00--------------
........................................................................................................................................................................ACGGAGTCTTGCTCTGTCGCCCAGGCCGA.....................................................291.000.00----1.00------------------------------------------
...............................................................................................................................................ACATACATTTATTTATTTATTTCTG..................................................................................251.000.001.00----------------------------------------------
...............................................................................................................................................ACATACATTTATTTATTTTTT......................................................................................211.000.00-----1.00-----------------------------------------
....................................................................................................................................................CATTTATTTATTTATTTATCAAG...............................................................................231.000.00-----1.00-----------------------------------------
....................................................................................................................................................................................TCTGTCGCCCAGGCTGGAATAAA...............................................231.000.00-----------------------1.00-----------------------
...............................................................................................................................................ACATACATTTATTTATTTATCTAG...................................................................................241.000.001.00----------------------------------------------
.......CAATGTAGAGAAGAATGAAAAT.............................................................................................................................................................................................................................2211.001.00-------------------------------------1.00---------
....GGCCAATGTAGAGAAG......................................................................................................................................................................................................................................1621.001.00--------------1.00--------------------------------
...............................................................................................................................................ACATACATTTATTTATTTATTTTCAG.................................................................................261.000.00-1.00---------------------------------------------
......................................................................................................................................................................................TGTCGCCCAGGCTGGAATGCGATC............................................241.000.00--1.00--------------------------------------------
...................................................................................................................................................ACATTTATTTATTTATTCTCG..................................................................................211.000.00-1.00---------------------------------------------
..................................................................................................................................................TACATTTATTTATTTCTCG.....................................................................................191.000.001.00----------------------------------------------
....................................................................................................................................................................................TCTGTCGCCCAGGCTGGAATGCGGTG............................................261.000.00------------------------------------------1.00----
.......CAATGTAGAGAAGAATGAAAA..............................................................................................................................................................................................................................2111.001.00--------------------------1.00--------------------
...........GTAGAGAAGAATGAAAAT.............................................................................................................................................................................................................................1830.330.33-------------------------------------------0.33---
.......CAATGTAGAGAAGAAT...................................................................................................................................................................................................................................1640.250.25--------------------------------------------0.25--
.............................................................................................................................................................................................CAGGCTGGAATGCAGTGTCGCG.......................................2260.170.17---------------------------------------------0.17-

Antisense strand
TTGGGGCCAATGTAGAGAAGAATGAAAATGAATCCTGTGCTGATAGAGATGTAAGTACTCTGATTCCTCCTCACATTTTTGGTAAGCAAGTACATGAGCCTTAATATAAGCTTCCCTTCACCCACATACTTACATACATACATACATACATTTATTTATTTATTTATGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAATGCAGTGTCGCGATCTTGCCTCACTGCAACCTCTGCCACCCAGGTTCAAGT
....................................................................((..........((.((((...((.((........)).)).)))).))................((((.(((.(((.(((....))).))).))).))))..))..............................................................................
....................................................................69.....................................................................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343336SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105752CONTROL(GSM1105752)
small RNA sequencing data. (hela)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
............................................................................................................................................................................AGTCTTGCTCTGTCGCCCAAT......................................................... 212.000.00------1.00----1.00-----------------------------------
.....................................................................................................................................................................................CTGTCGCCCAGGCTGGAATGCAGTGTCTA........................................ 292.000.00----2.00------------------------------------------
............................................................................................................................................................................AGTCTTGCTCTGTCGCCCAA.......................................................... 202.000.00------1.00----1.00-----------------------------------
............................................................................................................................................................................AGTCTTGCTCTGTCGCCCAGA......................................................... 212.000.00------2.00----------------------------------------
.......................................................................................................................................................................................................TGCAGTGTCGCGATCTTGA................................ 191.000.00----------------------------------1.00------------
........................................................ACTCTGATTCCTCCTCATATC............................................................................................................................................................................. 211.000.00----------------------------------------1.00------
....................................................................................................................................................................................................................................CCTCTGCCACCCAGGTTCACCGC 231.000.00--1.00--------------------------------------------
......................................................................................................................................................................................................................................TCTGCCACCCAGGTTCAATT 201.000.00--------------------------------------1.00--------
..................................................................................................................................................................................................................................AACCTCTGCCACCCAGGTTCAAGTCCAG 281.000.00---------------1.00-------------------------------
.....................................................................................................................................................................................CTGTCGCCCAGGCTGGAATGCAGTGTCTC........................................ 291.000.00----1.00------------------------------------------
.........................................................................................................................................................................................CGCCCAGGCTGGAATGCAGTAAT.......................................... 231.000.00------------------1.00----------------------------
........................................................ACTCTGATTCCTCCTCGTA............................................................................................................................................................................... 191.000.00----------------------1.00------------------------
...................................................................................................................................................................................................GGAATGCAGTGTCGCGATTGCC................................. 221.000.00----1.00------------------------------------------
...........................................................................................................................................................................GAGTCTTGCTCTGTCGCCCAGGCTGGAATCCC............................................... 321.000.00----1.00------------------------------------------
.....................................................................................................................................................................................................................................CTCTGCCACCCAGGTTCACTTT 221.000.00-----------------------------1.00-----------------
...............................................................................................................................................................................CTTGCTCTGTCGCCCAGGTC....................................................... 201.000.00---------------------------------1.00-------------
..........................................................................................................................................................................GGAGTCTTGCTCTGTCGCCCAGGCTGGAATAA................................................ 321.000.00--1.00--------------------------------------------
.................................................................................................................................................................................ACACTGCATTCCAGCCTGGGCGACAGAGCA........................................... 3030.330.33--0.33--------------------------------------------
....................................................................................................................................................................................................GATCGCGACACTGCATTC.................................... 1870.140.14----------------------------------------------0.14