| (1) BRAIN | (5) BREAST | (11) CELL-LINE | (1) CERVIX | (1) HELA | (1) LIVER | (2) OTHER | (2) SKIN | (1) TESTES | (1) UTERUS |
| TGCAGGTGGTAATAAAGATAAATAAAACATGGTCATTAATCTTAAGGGGACAACATTCTAGTGTAAGAGAAAACATGAAGAAATAATAACATGAAATTTAAGTTCTGGAATAGCATTCTCAGTGCAATGAAAGGAGAGACAATCTATGAGAATTGGAAAACACTTCATAGAGAGGGTGACATTTGAGCCATTTCTTAAAGGACAAGTAGCAGTTCATCCAGATGGAGAAGAGAAGCCATTCCTGGAAGAA .............................................................(((.........((((............)))).........((((...((.((((.....)))).))...))))...)))............................................................................................................. ...........................................................60................................................................................142.......................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189786 | SRR189782 | SRR189787 | SRR037937(GSM510475) 293cand2. (cell line) | SRR189785 | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR191536(GSM715646) 183genomic small RNA (size selected RNA from . (breast) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR191465(GSM715575) 113genomic small RNA (size selected RNA from . (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | TAX577740(Rovira) total RNA. (breast) | TAX577739(Rovira) total RNA. (breast) | SRR038854(GSM458537) MM653. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR038860(GSM458543) MM426. (cell line) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR040043(GSM532928) G428T. (cervix) | TAX577745(Rovira) total RNA. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029125(GSM416754) U2OS. (cell line) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................CAGTGCAATGAAAGGGCAT................................................................................................................ | 19 | 381.00 | 0.00 | 327.00 | 22.00 | 12.00 | 5.00 | 3.00 | - | - | - | - | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | |
| .......................................................................................................................CAGTGCAATGAAAGGGCA................................................................................................................. | 18 | 24.00 | 0.00 | 17.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .......................................................................................................................CAGTGCAATGAAAGGGCAC................................................................................................................ | 19 | 7.00 | 0.00 | 6.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................CAGTGCAATGAAAGGGCAA................................................................................................................ | 19 | 5.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| .......................................................................................................................CAGTGCAATGAAAGGGTAT................................................................................................................ | 19 | 4.00 | 0.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................CAGTGCAATGAAAGGGC.................................................................................................................. | 17 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................CAGTGCAATGAAAGGGCCT................................................................................................................ | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................AAGGACAAGTAGCAGTTCTT................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................AAGAGAAAACATGAAGTAT....................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .......................................................................................................................CAGTGCAATGAAAGGGGAC................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................CAGTGCAATGAAAGGACA................................................................................................................. | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................CAGTGCAATGAAAGGGAAT................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................AAGTAGCAGTTCATCATA............................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................TAAAGGACAAGTAGCAGTTCATCCAGA............................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................CAGTGCAATGAAAGGGGAT................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................AGATGGAGAAGAGAAGCC............. | 18 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - |
| ..............................................................................................................................................................................................TTTCTTAAAGGACAAG............................................ | 16 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |
| TGCAGGTGGTAATAAAGATAAATAAAACATGGTCATTAATCTTAAGGGGACAACATTCTAGTGTAAGAGAAAACATGAAGAAATAATAACATGAAATTTAAGTTCTGGAATAGCATTCTCAGTGCAATGAAAGGAGAGACAATCTATGAGAATTGGAAAACACTTCATAGAGAGGGTGACATTTGAGCCATTTCTTAAAGGACAAGTAGCAGTTCATCCAGATGGAGAAGAGAAGCCATTCCTGGAAGAA .............................................................(((.........((((............)))).........((((...((.((((.....)))).))...))))...)))............................................................................................................. ...........................................................60................................................................................142.......................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189786 | SRR189782 | SRR189787 | SRR037937(GSM510475) 293cand2. (cell line) | SRR189785 | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR191536(GSM715646) 183genomic small RNA (size selected RNA from . (breast) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR191465(GSM715575) 113genomic small RNA (size selected RNA from . (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | TAX577740(Rovira) total RNA. (breast) | TAX577739(Rovira) total RNA. (breast) | SRR038854(GSM458537) MM653. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR038860(GSM458543) MM426. (cell line) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR040043(GSM532928) G428T. (cervix) | TAX577745(Rovira) total RNA. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029125(GSM416754) U2OS. (cell line) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........TAATAAAGATAAATAAAATAG............................................................................................................................................................................................................................ | 21 | 3.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................GACAATCTATGAGAATTAA.............................................................................................. | 19 | 3.00 | 0.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................AAAACATGAAGAAATAAGG.................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..........AATAAAGATAAATAAAACATT........................................................................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........TAATAAAGATAAATAAAATAT............................................................................................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................TTCATTGCACTGAGAATG....................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |