ID: uc003jet.1_intron_9_0_chr5_10397457_f.3p
GENE: MARCH6(10)
chr5:10400696-10400945+


(1)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(7)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(3)
HELA 		(1)
LIVER 		(1)
OTHER 		(3)
SKIN 		(4)
UTERUS

Sense strand
GATTTGGCATGGCCCTATTAGACCTTAATAGCTTTGTTGTTCTCTAGTTACAGAGAATGTCCTAGGCAGTGTATTTTTAGCCTAGTTCTGGAATCTTTCATTTCTCCAAGAAGCCCTAGTTCCTTTTAGTGGGGAATTGTAGTAGGAGTGTTCATTGTTTTGATGTCGGAGTTTTCATGGAATTTTTTCCCCCTTTTTAGCATTTTGCCCTTACCATATTGGTCATTTCTCCCTTGTTGGTTTGGGATTT
.............................................................((((((............)))))).....(((..((((((..((((.....(((((((((((((.....))))))).....)))).))..(((......)))....)))).....))))))..)))...............................................................
...........................................................60.............................................................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR343334DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR037931(GSM510469)
293GFP. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR343335GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040036(GSM532921)
G243N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
................................................................GGCAGTGTATTTTTAGCT........................................................................................................................................................................18115.004.006.005.003.001.00---------------------------
...............................................................AGGCAGTGTATTTTTAGCT........................................................................................................................................................................1918.006.002.002.003.001.00---------------------------
...............................................................AGGCAGTGTATTTTTAGC.........................................................................................................................................................................1816.006.002.002.001.001.00---------------------------
...............................................................AGGCAGTGTATTTTTAG..........................................................................................................................................................................1725.505.500.502.002.001.00---------------------------
................................................................GGCAGTGTATTTTTAGC.........................................................................................................................................................................1714.004.002.001.001.00----------------------------
........................................................................................................................................................................................................................................CTTGTTGGTTTGGGAACA184.000.00----4.00--------------------------
...............................................................AGGCAGTGTATTTTTAGCTGGC.....................................................................................................................................................................2213.006.00-2.00-----------------1.00-----------
...............................................................AGGCAGTGTATTTTTAGCTGG......................................................................................................................................................................2112.006.00---1.00-----------------1.00---------
................................................................GGCAGTGTATTTTTAGCTGGT.....................................................................................................................................................................2112.004.00-----------------1.00--1.00----------
.............................................................CTAGGCAGTGTATTTAG............................................................................................................................................................................172.000.002.00------------------------------
..TTTGGCATGGCCCTAC........................................................................................................................................................................................................................................161.000.00------------1.00------------------
................................................................GGCAGTGTATTTTTAGGT........................................................................................................................................................................181.000.001.00------------------------------
................................................................GGCAGTGTATTTTTAGCC........................................................................................................................................................................1811.001.00--1.00----------------------------
.................................................................................................................................................................GATGTCGGAGTTTTCATGGAAA...................................................................221.000.00-------------1.00-----------------
...............................................................AGGCAGTGTATTTTTAGCG........................................................................................................................................................................1911.006.00-1.00-----------------------------
.........................................................................................................................................................................................................................ATTGGTCATTTCTCCCTTGTTGGTTTGC.....281.000.00------1.00------------------------
.......................................TTCTCTAGTTACAGAGAATG...............................................................................................................................................................................................2011.001.00--------1.00----------------------
..............................................................................................................................................................................................CCCTTTTTAGCATTTTGCCCTTACCATA................................2811.001.00----------------1.00--------------
.................................................................GCAGTGTATTTTTAGCG........................................................................................................................................................................171.000.00---1.00---------------------------
.........................................................................................................................................................................................................ATTTTGCCCTTACCATATTG.............................2011.001.00------------------------1.00------
...............................................................AGGCAGTGTATTTTTAT..........................................................................................................................................................................171.000.00---1.00---------------------------
................................................................GGCAGTGTATTTTTAGCTG.......................................................................................................................................................................1911.004.00-1.00-----------------------------
.................................................................GCAGTGTATTTTTAGCTGGT.....................................................................................................................................................................201.000.001.00------------------------------
.......................................................................................................................................................................................................................ATATTGGTCATTTCTCCCTTGTTGGT.........2611.001.00---------1.00---------------------
................................................................GGCAGTGTATTTTTAGCTGG......................................................................................................................................................................2011.004.00-------------------------1.00-----
...............................................................................................................................AGTGGGGAATTGTAGGCAA........................................................................................................191.000.00-------1.00-----------------------
................................................................GGCAGTGTATTTTTAGCTT.......................................................................................................................................................................1911.004.001.00------------------------------
..TTTGGCATGGCCCTACTTT.....................................................................................................................................................................................................................................191.000.00------------1.00------------------
...............................................................AGGCAGTGTATTTTTAATT........................................................................................................................................................................191.000.00-1.00-----------------------------
.........................................................................................................................................................................................................................ATTGGTCATTTCTCCCTTGTTGGTTTGG.....2811.001.00------1.00------------------------
................................................................GGCAGTGTATTTTTAGG.........................................................................................................................................................................171.000.00-1.00-----------------------------
.............................................AGTTACAGAGAATGTCCT...........................................................................................................................................................................................1811.001.00---1.00---------------------------
....................................................................................................................................................................................................................................CTCCCTTGTTGGTTTGGG....1811.001.00--------------1.00----------------
..................................................................................................................................GGGGAATTGTAGTAGGAGTGTTCA................................................................................................2411.001.00-----------1.00-------------------
..............................................................................................................................................................................................................................TCATTTCTCCCTTGTTGGTTTGGGAT..2611.001.00---------1.00---------------------
.............................................................CTAGGCAGTGTATTTAGC...........................................................................................................................................................................181.000.001.00------------------------------
...............................................................AGGCAGTGTATTTTTAGCGGC......................................................................................................................................................................2111.006.00---------------1.00---------------
...............................................................AGGCAGTGTATTTTTCG..........................................................................................................................................................................171.000.00---1.00---------------------------
.....................................................................................................................AGTTCCTTTTAGTGGGAGG..................................................................................................................191.000.00--------1.00----------------------
..............................................................TAGGCAGTGTATTTTTTT..........................................................................................................................................................................181.000.001.00------------------------------
................................................................GGCAGTGTATTTTTAGTT........................................................................................................................................................................181.000.00--1.00----------------------------
...........................................................................................................................................TAGTAGGAGTGTTCATTGTT...........................................................................................2011.001.00-----------------------1.00-------
...............................................................AGGCAGTGTATTTTTATCT........................................................................................................................................................................191.000.00---1.00---------------------------
...............................................................AGGCAGTGTATTTTTAGTTGG......................................................................................................................................................................2120.505.50--------------------------0.50----
..................................................................................................................................GGGGAATTGTAGTAGG........................................................................................................1620.500.50---------------------------0.50---
......................................................................................................................................................................................................................................CCCTTGTTGGTTTGGG....1620.500.50----------------------------0.50--
...............................................................AGGCAGTGTATTTTTAGA.........................................................................................................................................................................1820.505.50-0.50-----------------------------
...............................................................AGGCAGTGTATTTTTAGGT........................................................................................................................................................................1920.505.500.50------------------------------

Antisense strand
GATTTGGCATGGCCCTATTAGACCTTAATAGCTTTGTTGTTCTCTAGTTACAGAGAATGTCCTAGGCAGTGTATTTTTAGCCTAGTTCTGGAATCTTTCATTTCTCCAAGAAGCCCTAGTTCCTTTTAGTGGGGAATTGTAGTAGGAGTGTTCATTGTTTTGATGTCGGAGTTTTCATGGAATTTTTTCCCCCTTTTTAGCATTTTGCCCTTACCATATTGGTCATTTCTCCCTTGTTGGTTTGGGATTT
.............................................................((((((............)))))).....(((..((((((..((((.....(((((((((((((.....))))))).....)))).))..(((......)))....)))).....))))))..)))...............................................................
...........................................................60.............................................................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR343334DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR037931(GSM510469)
293GFP. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR343335GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040036(GSM532921)
G243N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
.................................................................GCAGTGTATTTTTAGAAAG...................................................................................................................................................................... 193.000.00-----2.00----------------1.00--------
.....................................................................................................................AGTTCCTTTTAGTGGGGCGGC................................................................................................................ 211.000.00-----------1.00-------------------
.........................................................................................................CCAAGAAGCCCTAGTTGTC.............................................................................................................................. 191.000.00----------1.00--------------------
..............................................................................................................................................TAGGAGTGTTCATTGTTG.......................................................................................... 181.000.00------------------1.00------------
...........................................................................................................................................................................................................TTTGCCCTTACCATACGGT............................ 191.000.00-------1.00-----------------------
.........................................................................................................CCAAGAAGCCCTAGTTTGGC............................................................................................................................. 201.000.00----------1.00--------------------
...................................................................................GAAAGATTCCAGAACT....................................................................................................................................................... 1650.200.20-----------------------------0.20-
.............................................................................................................TAAAAGGAACTAGGGCTTC.......................................................................................................................... 1980.120.12------------------------------0.12