ID: uc003hzz.2_intron_3_0_chr4_111119524_r
GENE: (1)
chr4:111119474-111119727-


(1)
AGO2.ip 		(1)
AGO3.ip 		(4)
B-CELL 		(4)
BRAIN 		(6)
BREAST 		(24)
CELL-LINE 		(6)
CERVIX 		(3)
HEART 		(2)
HELA 		(13)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(14)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
CGCCGGGAGGAGGAGAGCCCCAGAGAGAGGAGCTGGGAGCGGAGGCGCAGGCAATGCTCAGCCCTGGATGTAGCTGAGAGGCTGGGAGAAGAGACGACCGCTGGAGACCGAGCGGCGTGGGGAAGACCTAGGGGGGTGGGTGGGGGAAGCAGACAGGAGAACACTCGAAATCAAGCGCTTTACAGATTATTTTATTTTGTATAGAGAACACGTAGCGACTCCGAAGATCAGCCCCAATGAACATGTCAGTGTTG
........................................................(((((((((((......)).)).)))))))........................................................................................................................................................................
..................................................51................................................101.......................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189782SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR040012(GSM532897)
G648N. (cervix)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR029131(GSM416760)
MCF7. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040011(GSM532896)
G529T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR038855(GSM458538)
D10. (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR038858(GSM458541)
MEL202. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038860(GSM458543)
MM426. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038853(GSM458536)
MELB. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR189785SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
.................................................................................................................................AGGGGGGTGGGTGGGGGAAGCAGACAGGAG...............................................................................................3016.006.00-6.00--------------------------------------------------------------------------------
..............................AGCTGGGAGCGGAGGCGC..............................................................................................................................................................................................................1814.004.00--------4.00-------------------------------------------------------------------------
...........................AGGAGCTGGGAGCGGAGGCG...............................................................................................................................................................................................................2014.004.00-------1.00---------1.00-----------------1.00---------------1.00------------------------------
..............................................................................AGGCTGGGAGAAGAGACGA.............................................................................................................................................................1923.503.50--0.50-0.50---------------------0.50------------------------------------------------0.500.500.500.50---
.........................AGAGGAGCTGGGAGCGGA...................................................................................................................................................................................................................1813.003.00---------------1.00--------------------------------------------1.00---1.00-----------------
..........................GAGGAGCTGGGAGCGGAG..................................................................................................................................................................................................................1813.003.00---1.00-----------------------1.00---------------------------------------------1.00--------
................................................................................................................................TAGGGGGGTGGGTGGGGGAAGCAGACAGGAG...............................................................................................3113.003.00-2.00---1.00----------------------------------------------------------------------------
...........................................................................GAGAGGCTGGGAGAAGAGACGA.............................................................................................................................................................2213.003.00---2.00------1.00-----------------------------------------------------------------------
.....................................................ATGCTCAGCCCTGGATGTA......................................................................................................................................................................................1913.003.00--------------3.00-------------------------------------------------------------------
.......................................................................AGCTGAGAGGCTGGGAGAAGAGACG..............................................................................................................................................................2513.003.00------3.00---------------------------------------------------------------------------
............................................................................................................................................................................................................................CCGAAGATCAGCCCCAATGAA.............2113.003.00---3.00------------------------------------------------------------------------------
.................................................................................................................................AGGGGGGTGGGTGGGGGAAGCAGACAGG.................................................................................................2813.003.00-----3.00----------------------------------------------------------------------------
...........................AGGAGCTGGGAGCGGAGGC................................................................................................................................................................................................................1912.002.00-----------------1.00-------------------------------------------1.00--------------------
.............................................................................................................................................................................................................................CGAAGATCAGCCCCAATGAACAT..........2312.002.00--2.00-------------------------------------------------------------------------------
.............................GAGCTGGGAGCGGAGGCG...............................................................................................................................................................................................................1812.002.00----------------------1.00-------------------1.00---------------------------------------
...........................................................................................................................................................................................................GAGAACACGTAGCGACTCCGAAGATC.........................2612.002.00----------1.00---------1.00-------------------------------------------------------------
..............................................................................................................................................GGGGAAGCAGACAGGAGAA.............................................................................................1912.002.00--2.00-------------------------------------------------------------------------------
...........................................................................................................................................................GGAGAACACTCGAAATCAAGC..............................................................................2112.002.001.00---------1.00-----------------------------------------------------------------------
...............................................................................................................................................................AACACTCGAAATCAAGCGCTTTACAGAT...................................................................2812.002.00------------------------2.00---------------------------------------------------------
............................................................................................................................................................................................................AGAACACGTAGCGACTCCGAAGATCAGCC.....................2912.002.001.00-------------------------------------------1.00-------------------------------------
..................................................................................................................................................................ACTCGAAATCAAGCGCTTTACAGATTA.................................................................2712.002.00-------------------------2.00--------------------------------------------------------
..........................................................................................................................................................AGGAGAACACTCGAAATCAAGCGCTTTA........................................................................2812.002.002.00---------------------------------------------------------------------------------
........................................................................GCTGAGAGGCTGGGAGAA....................................................................................................................................................................1821.501.50----------------------------1.00--------------------------------------------------0.50--
...........................AGGAGCTGGGAGCGGAGAT................................................................................................................................................................................................................191.000.00-----------------------------------------------------1.00----------------------------
.............................................................................................ACGACCGCTGGAGACCGAG..............................................................................................................................................1911.001.00---------------------------------------------1.00------------------------------------
...................................................................................................................................................AGCAGACAGGAGAACACTCGA......................................................................................2111.001.001.00---------------------------------------------------------------------------------
...........................AGGAGCTGGGAGCGGAGA.................................................................................................................................................................................................................181.000.00-----------------------1.00----------------------------------------------------------
................................................................................................................................................................................................................CACGTAGCGACTCCGAAGATCAGCC.....................2511.001.00-------------------------------------1.00--------------------------------------------
.................................................................GGATGTAGCTGAGAGGCTGGGGGG.....................................................................................................................................................................241.000.00------------1.00---------------------------------------------------------------------
........................GAGAGGAGCTGGGAGCGGAGGCGC..............................................................................................................................................................................................................2411.001.00-------------1.00--------------------------------------------------------------------
...........................................................................................AGACGACCGCTGGAGACC.................................................................................................................................................1811.001.001.00---------------------------------------------------------------------------------
..............................................................................AGGCTGGGAGAAGAGACGACCGCTG.......................................................................................................................................................2511.001.001.00---------------------------------------------------------------------------------
.......................................................................................................................................................GACAGGAGAACACTCGAA.....................................................................................1811.001.00----1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................AGCGACTCCGAAGATCAGCCCCAATGAATA...........301.000.001.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................AGAACACGTAGCGACTCC................................1811.001.00----1.00-----------------------------------------------------------------------------
............................................................................................GACGACCGCTGGAGACCGA...............................................................................................................................................1911.001.00------------1.00---------------------------------------------------------------------
..................................................................................................................................GGGGGGTGGGTGGGGGCCA.........................................................................................................191.000.00-----------1.00----------------------------------------------------------------------
..................................................................................................................................................................................................................CGTAGCGACTCCGAAGA...........................1711.001.00----------------------------------------------1.00-----------------------------------
.......................................................................................................................................................................................................TATAGAGAACACGTAGCG.....................................1811.001.00----1.00-----------------------------------------------------------------------------
.....................................................................................GAGAAGAGACGACCGCTGGAGACC.................................................................................................................................................2411.001.00----------------------------------------------------------------------1.00-----------
.............................GAGCTGGGAGCGGAGGCGCAGGC..........................................................................................................................................................................................................2311.001.00-------1.00--------------------------------------------------------------------------
.................................................................................................................................AGGGGGGTGGGTGGGGGAAGCAGACAGGA................................................................................................2911.001.00-----1.00----------------------------------------------------------------------------
...........................................................................................................................................................GGAGAACACTCGAAATCAAGCGCTTTACAG.....................................................................3011.001.00-1.00--------------------------------------------------------------------------------
........................................................................................AAGAGACGACCGCTGGAGACCGAG..............................................................................................................................................2411.001.00--1.00-------------------------------------------------------------------------------
...............................................................CTGGATGTAGCTGAGAGGCTGGGAGAAGA..................................................................................................................................................................2911.001.00------------------1.00---------------------------------------------------------------
..........................................................................TGAGAGGCTGGGAGAAATG.................................................................................................................................................................191.000.00----1.00-----------------------------------------------------------------------------
..................................................................................................................................................AAGCAGACAGGAGAACACTCGAAA....................................................................................2411.001.00---------------------1.00------------------------------------------------------------
.....................................................................................................................................................................................................................AGCGACTCCGAAGATCAGCCCCA..................2311.001.00---------------------------------1.00------------------------------------------------
...........................................................................................................................................................GGAGAACACTCGAAATCAAGCGCTTTATA......................................................................291.000.001.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................AGAACACGTAGCGACTCCGAAGATCA........................2611.001.00--1.00-------------------------------------------------------------------------------
......................................GCGGAGGCGCAGGCAATG......................................................................................................................................................................................................1811.001.00------------------------------------------------------1.00---------------------------
.........................................................................CTGAGAGGCTGGGAGAAGAGA................................................................................................................................................................2111.001.00-------------1.00--------------------------------------------------------------------
.........................................................................................................GACCGAGCGGCGTGGGGAAGAC...............................................................................................................................2211.001.001.00---------------------------------------------------------------------------------
.......................................................GCTCAGCCCTGGATGTAGC....................................................................................................................................................................................1911.001.00-------1.00--------------------------------------------------------------------------
............................................................................................................CGAGCGGCGTGGGGAAGACCTAG...........................................................................................................................2311.001.00---------1.00------------------------------------------------------------------------
....................................................................................................................................................GCAGACAGGAGAACACTCGAA.....................................................................................2111.001.00---------------------------------------------------------1.00------------------------
.................................................................................................................................................................................................................ACGTAGCGACTCCGAAGATCAGCCCC...................2611.001.00----1.00-----------------------------------------------------------------------------
..........................................AGGCGCAGGCAATGCTCAG.................................................................................................................................................................................................1911.001.00------------------------------------1.00---------------------------------------------
..........................................................CAGCCCTGGATGTAGCTGAGAGGCT...........................................................................................................................................................................2511.001.00-------------------------------1.00--------------------------------------------------
.............................................................................................................................................GGGGGAAGCAGACAGGATAG.............................................................................................201.000.00-----------1.00----------------------------------------------------------------------
.................CCCCAGAGAGAGGAGCTG...........................................................................................................................................................................................................................1821.001.00----------------------------0.50---------------------------------------------0.50-------
.....................................................................................................................................................CAGACAGGAGAACACTCG.......................................................................................1811.001.00-----------------------------------------------------------------1.00----------------
...........................................................................................................................AGACCTAGGGGGGTGGGTGGGGGAAGCAGACAGG.................................................................................................3411.001.00-----1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................................AACACGTAGCGACTCCGAAGATCAGCCCCAAT................3211.001.00------------------------------------------------------------------------1.00---------
..............................................................................................................................................................................................................AACACGTAGCGACTCCGAAGATCAGC......................2611.001.001.00---------------------------------------------------------------------------------
..............................................................................................................................................................................................................AACACGTAGCGACTCCGAAG............................2011.001.00----------------1.00-----------------------------------------------------------------
...........................................................................................AGACGACCGCTGGAGACCG................................................................................................................................................1911.001.00---1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................ACAGATTATTTTATTTTGTATAGAGAACACGTAGCGACTCCGAAGATCAGCTTTT..................551.000.00---------------------------------------------------------------------1.00------------
..........................................................................TGAGAGGCTGGGAGAAGAGACGACCG..........................................................................................................................................................2611.001.001.00---------------------------------------------------------------------------------
................................................AGGCAATGCTCAGCCCTGGATGTA......................................................................................................................................................................................2411.001.00--------------------------------------------------------1.00-------------------------
................................................................................................................................................GGAAGCAGACAGGAGAACACT.........................................................................................2111.001.00-------------------1.00--------------------------------------------------------------
........................GAGAGGAGCTGGGAGTGGC...................................................................................................................................................................................................................191.000.00----------------------------------------1.00-----------------------------------------
.........................AGAGGAGCTGGGAGCGGAGGCGCAGGCAATGCT....................................................................................................................................................................................................3311.001.00--------------------------------------------------------------1.00-------------------
.............................................................CCCTGGATGTAGCTGATT...............................................................................................................................................................................181.000.00-------------------------------------------1.00--------------------------------------
..........................................................................................................................AAGACCTAGGGGGGTGGGTGGGGGAAGT........................................................................................................281.000.00-1.00--------------------------------------------------------------------------------
..................................................................................................................................................................ACTCGAAATCAAGCGTAGT.........................................................................191.000.00-----------------------------------------------------------------------1.00----------
..........................................................CAGCCCTGGATGTAGCTGAGAGG.............................................................................................................................................................................2311.001.00-----------------------------------------1.00----------------------------------------
...................................................................................................GCTGGAGACCGAGCGGCGTGGGGAAG.................................................................................................................................2611.001.00--1.00-------------------------------------------------------------------------------
............................................................................................................................................................GAGAACACTCGAAATCAAGCGCTTTA........................................................................2611.001.001.00---------------------------------------------------------------------------------
....................CAGAGAGAGGAGCTGGGAGCG.....................................................................................................................................................................................................................2111.001.00------1.00---------------------------------------------------------------------------
............................................................................AGAGGCTGGGAGAAGAGACG..............................................................................................................................................................2011.001.00---1.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................GTAGCGACTCCGAAGAT..........................1711.001.00--------------------------------1.00-------------------------------------------------
......................................................................................................................................................AGACAGGAGAACACTCGAAATCAAGCG.............................................................................2711.001.00------------------------------------------------------------------1.00---------------
...................................................................................................................................................................................................................GTAGCGACTCCGAAGATCAGCC.....................2211.001.001.00---------------------------------------------------------------------------------
..........................................................................................................................AAGACCTAGGGGGGTGGGTGGGGGAAGC........................................................................................................2811.001.00-1.00--------------------------------------------------------------------------------
............................................................................................................................................................................................................AGAACACGTAGCGACTCCGA..............................2011.001.00----1.00-----------------------------------------------------------------------------
............................................................................................................................................................................................................AGAACACGTAGCGACTCCGAAGATCAGCCCCAA.................3311.001.00---------1.00------------------------------------------------------------------------
........................................................................GCTGAGAGGCTGGGATCG....................................................................................................................................................................181.000.00---------------------------------------1.00------------------------------------------
................................................................................GCTGGGAGAAGAGACGACCGCTGGAGACCG................................................................................................................................................3011.001.00----------------------------------1.00-----------------------------------------------
...........................................................................................AGACGACCGCTGGAGACCGAG..............................................................................................................................................2111.001.00-------------1.00--------------------------------------------------------------------
.................................................................................................................................AGGGGGGTGGGTGGGGGAAGCAGACAGGAGAAC............................................................................................3311.001.00-1.00--------------------------------------------------------------------------------
......................................................................................AGAAGAGACGACCGCTGGAGATT.................................................................................................................................................231.000.00---------------1.00------------------------------------------------------------------
.........GAGGAGAGCCCCAGAGAG...................................................................................................................................................................................................................................1811.001.00------------------------------------------------1.00---------------------------------
..........................................................................................................ACCGAGCGGCGTGGGGAAGACCC.............................................................................................................................231.000.00-1.00--------------------------------------------------------------------------------
...................................................................................................................................................AGCAGACAGGAGAACACTCGAAATCAAG...............................................................................2811.001.00------------------------------1.00---------------------------------------------------
..........................GAGGAGCTGGGAGCGGAGGC................................................................................................................................................................................................................2011.001.00--------------------------------------1.00-------------------------------------------
.........................................................................CTGAGAGGCTGGGAGACCGG.................................................................................................................................................................201.000.00------------1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................GAGAACACGTAGCGACTCCGAAGATCAGCC.....................3011.001.00-----------------------------------------------------------1.00----------------------
..............................................................................AGGCTGGGAGAAGAGAAGA.............................................................................................................................................................191.000.00----------------------------------------------------1.00-----------------------------
..........................................................................TGAGAGGCTGGGAGAAGAGACGACC...........................................................................................................................................................2511.001.00---1.00------------------------------------------------------------------------------
..................................................................................................................................GGGGGGTGGGTGGGGTTGT.........................................................................................................191.000.00-------------------------------------------------1.00--------------------------------
.................................................................................................................................................................................................................ACGTAGCGACTCCGAAGATCAGCCCCAATG...............3011.001.00----1.00-----------------------------------------------------------------------------
..........................GAGGAGCTGGGAGCGGAGGCGC..............................................................................................................................................................................................................2211.001.00-------1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................ACACGTAGCGACTCCGAAGATC.........................2211.001.00-----------------------1.00----------------------------------------------------------
.............................................................................GAGGCTGGGAGAAGAGACGAC............................................................................................................................................................2111.001.00--------------------------1.00-------------------------------------------------------
...........................................................................................................................AGACCTAGGGGGGTGGGTGGGGGAAGCAG......................................................................................................2911.001.00-1.00--------------------------------------------------------------------------------
...............................................................................................................................................GGGAAGCAGACAGGAGAAC............................................................................................1911.001.00----------------------------------------------------------1.00-----------------------
.......................................................................................................................................................................................................TATAGAGAACACGTAGCGACTCCGAAGA...........................2811.001.001.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................ACGTAGCGACTCCGAA.............................1611.001.00----------------1.00-----------------------------------------------------------------
.........................................................................................AGAGACGACCGCTGGAGACC.................................................................................................................................................2011.001.001.00---------------------------------------------------------------------------------
................................................................................................ACCGCTGGAGACCGAGCGGC..........................................................................................................................................2011.001.00------------------1.00---------------------------------------------------------------
.....................AGAGAGAGGAGCTGGGAGCGGAGGCGCAGGCAA........................................................................................................................................................................................................3311.001.00-----------------------------1.00----------------------------------------------------
............................................................................................................................................................................................................................CCGAAGATCAGCCCCAATGAACAT..........2411.001.00--1.00-------------------------------------------------------------------------------
............................................................................................GACGACCGCTGGAGACCG................................................................................................................................................1811.001.00-------------------1.00--------------------------------------------------------------
.....................................................................................................................................................................................................................AGCGACTCCGAAGATCAGCCCCC..................231.000.00-------------------------------------------------------1.00--------------------------
.............................................................................................................GAGCGGCGTGGGGAAGGGT..............................................................................................................................191.000.00-----------1.00----------------------------------------------------------------------
.......................................................................................................GAGACCGAGCGGCGTGGGGAAGACCC.............................................................................................................................261.000.00-1.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................AGAGAACACGTAGCGACTCCGAAGATCAGC......................3011.001.00--------------------1.00-------------------------------------------------------------
..........................................................................................GAGACGACCGCTGGAGACC.................................................................................................................................................1911.001.00----------------------1.00-----------------------------------------------------------
..........................................................................................................................................................................................................AGAGAACACGTAGCGACTC.................................1911.001.001.00---------------------------------------------------------------------------------
.....................................................ATGCTCAGCCCTGGATGT.......................................................................................................................................................................................1811.001.00--------------------------------------------------------------------1.00-------------
..............................................................................................................................................................................................................................GAAGATCAGCCCCAATGAA.............1911.001.00---------------------1.00------------------------------------------------------------
.............................................................................................................................................................................................................GAACACGTAGCGACTCCGAAGATCAG.......................2611.001.001.00---------------------------------------------------------------------------------
.............................................................................................................GAGCGGCGTGGGGAAGACC..............................................................................................................................1920.500.500.50---------------------------------------------------------------------------------
..............................................................................................................AGCGGCGTGGGGAAGACC..............................................................................................................................1820.500.50--0.50-------------------------------------------------------------------------------
..............................................................................AGGCTGGGAGAAGAGACGAC............................................................................................................................................................2020.500.50---------------------------0.50------------------------------------------------------
................................................................................GCTGGGAGAAGAGACGA.............................................................................................................................................................1720.500.50------0.50---------------------------------------------------------------------------
...............................................................................GGCTGGGAGAAGAGACGA.............................................................................................................................................................1820.500.50--0.50-------------------------------------------------------------------------------
.........................................................................................................................................................................................ATTATTTTATTTTGTATAG..................................................1940.250.25--------------------------------------------------------------------------------0.25-
................................................................................................................................TAGGGGGGTGGGTGGGG.............................................................................................................1760.170.17--------------------------------------------------------------------------------0.17-

Antisense strand
CGCCGGGAGGAGGAGAGCCCCAGAGAGAGGAGCTGGGAGCGGAGGCGCAGGCAATGCTCAGCCCTGGATGTAGCTGAGAGGCTGGGAGAAGAGACGACCGCTGGAGACCGAGCGGCGTGGGGAAGACCTAGGGGGGTGGGTGGGGGAAGCAGACAGGAGAACACTCGAAATCAAGCGCTTTACAGATTATTTTATTTTGTATAGAGAACACGTAGCGACTCCGAAGATCAGCCCCAATGAACATGTCAGTGTTG
........................................................(((((((((((......)).)).)))))))........................................................................................................................................................................
..................................................51................................................101.......................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189782SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR040012(GSM532897)
G648N. (cervix)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR029131(GSM416760)
MCF7. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040011(GSM532896)
G529T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR038855(GSM458538)
D10. (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR038858(GSM458541)
MEL202. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038860(GSM458543)
MM426. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038853(GSM458536)
MELB. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR189785SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
..........................................................................................................ACCGAGCGGCGTGGGGCAA................................................................................................................................. 191.000.00---------1.00------------------------------------------------------------------------
.....................................................................................................................................................................................................................................ACACTGACATGTTCATTGGGGCT.. 2311.001.00---------------------------------------------------------------1.00------------------
..................................................................................................................................................................................................................CTGATCTTCGGAGTCGCTACG....................... 2111.001.00--------------------------------------------------1.00-------------------------------
...............................................AGGGCTGAGCATTGCCTG............................................................................................................................................................................................. 1811.001.00-----------------------------------------------1.00----------------------------------
..............................................AGGGCTGAGCATTGCCTGC............................................................................................................................................................................................. 1911.001.00-------------------------------------------------------------------1.00--------------
.....................................................................................................................CCTAGGTCTTCCCCA.......................................................................................................................... 1580.120.12---------------------------------------------------------------------------------0.12