| (1) AGO1.ip | (2) BRAIN | (8) CELL-LINE | (2) CERVIX | (1) FIBROBLAST | (3) HEART | (3) HELA | (1) LIVER | (1) OTHER | (1) RRP40.ip | (12) SKIN |
| TTCTACAGGCTATTACTTTTGATCATCAGGACCACTGAGCATTTTTATCCTTAAGCGTATCTAATGCTGAATGGCTAATATAGCCTTCTCTCAAATGTTTGAAGTGTTTGAAACTCTCAAACACTGAAACTCTCAAATGTTCAGTGTTTGAAAACCAGGGCCCTTTTTTTTTTTTCCTAATGTCTTTGACACCAAATCAGAAACCTAACACCATGTACCAGCAGTGGAGCTGATCCCTACGTCCGTGTCT ....................................................................................................................((((((((((.(((........))))))))))))).....((((..............))))........................................................................ .............................................................................................................110..........................................................................187............................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189782 | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | GSM1105748AGO1(GSM1105748) small RNA sequencing data. (ago1 hela) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | GSM532874(GSM532874) G699T. (cervix) | SRR207118(GSM721080) RRP40 knockdown. (RRP40 cell line) | SRR040036(GSM532921) G243N. (cervix) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM450610(GSM450610) miRNA sequencing raw reads from post-mortem s. (brain) | GSM1105752CONTROL(GSM1105752) small RNA sequencing data. (hela) | SRR363676(GSM830253) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................CCTTTTTTTTTTTTCCTAATTG................................................................... | 22 | 25.00 | 0.00 | 12.00 | 10.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................CTTTTTTTTTTTTCCTAATTG................................................................... | 21 | 15.00 | 0.00 | 10.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................TCTCAAACACTGAAACTCTCA................................................................................................................... | 21 | 1 | 9.00 | 9.00 | - | - | - | - | - | - | 2.00 | 1.00 | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................TCTCAAACACTGAAACTCTCAAAT................................................................................................................ | 24 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................................CCTTTTTTTTTTTTCCTAATTA................................................................... | 22 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................TCTCAAACACTGAAACTCTCAAA................................................................................................................. | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................GGCCCTTTTTTTTTTTTGG......................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................AAATGTTCAGTGTTTGAAAAC............................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................................................CCTTTTTTTTTTTTCCTAATGG................................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................CCTTTTTTTTTTTTCCTAACCTG.................................................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................CCCTTTTTTTTTTTTCCTAATG.................................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................CCCTTTTTTTTTTTTCCCAG...................................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................CCTTTTTTTTTTTTCCTAATTT................................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................TCTCAAACACTGAAACTCTCAA.................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................AGGGCCCTTTTTTTTTTTTCTG........................................................................ | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................CTCAAACACTGAAACTCTCAAAT................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................GGCCCTTTTTTTTTTTTCTC........................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................AGGGCCCTTTTTTTTTTTTTCTG....................................................................... | 23 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................GGGCCCTTTTTTTTTTTTCCCC....................................................................... | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................AAACCTAACACCATGTACCAGCAG.......................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TCTCAAACACTGAAACTCTCAAATG............................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................TCCCTACGTCCGTGT.. | 15 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| ....................................................................................................................................................................................................................ATGTACCAGCAGTGG....................... | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| TTCTACAGGCTATTACTTTTGATCATCAGGACCACTGAGCATTTTTATCCTTAAGCGTATCTAATGCTGAATGGCTAATATAGCCTTCTCTCAAATGTTTGAAGTGTTTGAAACTCTCAAACACTGAAACTCTCAAATGTTCAGTGTTTGAAAACCAGGGCCCTTTTTTTTTTTTCCTAATGTCTTTGACACCAAATCAGAAACCTAACACCATGTACCAGCAGTGGAGCTGATCCCTACGTCCGTGTCT ....................................................................................................................((((((((((.(((........))))))))))))).....((((..............))))........................................................................ .............................................................................................................110..........................................................................187............................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189782 | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | GSM1105748AGO1(GSM1105748) small RNA sequencing data. (ago1 hela) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | GSM532874(GSM532874) G699T. (cervix) | SRR207118(GSM721080) RRP40 knockdown. (RRP40 cell line) | SRR040036(GSM532921) G243N. (cervix) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM450610(GSM450610) miRNA sequencing raw reads from post-mortem s. (brain) | GSM1105752CONTROL(GSM1105752) small RNA sequencing data. (hela) | SRR363676(GSM830253) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................CCCTTTTTTTTTTTTCGATC...................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................ATTAGCCATTCAGCATTAGATAC........................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................AACCAGGGCCCTTTTCGAT............................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................GTTCAGTGTTTGAAATCTG............................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................TTTTTTCCTAATGTCCC................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................CACCAAATCAGAAACCCC........................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................CCAGGGCCCTTTTTTTGTCG............................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....AAAAGTAATAGCCTG...................................................................................................................................................................................................................................... | 15 | 4 | 0.75 | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | 0.25 | - | - |
| ...............TCCTGATGATCAAAAG........................................................................................................................................................................................................................... | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - |