ID: uc003dtk.1_intron_0_0_chr3_99536888_f.3p
GENE: (1)
chr3:99730347-99730596+


(1)
B-CELL
(13)
BRAIN
(6)
BREAST
(4)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(2)
OTHER
(2)
SKIN

Sense strand
CTCCAGTTTTAATTTTATAAACTAAATACCTGACAATTTATATCTATAAAGCCTGTTGAGATCATGGAATATTAGCACTTATTGTTGCTGATTGAGAGAAGACTCACAATTCTTGAATATTGGATGAAGCAGTGGATAGGATGTCATTGATGTTCTGCCAAAAAAGTTCATGTATTAAACCAAAGTTCCTTCTTGAATAGAAGACTGTCCCATCTCTACCCATAGGCTCCACTTCACAGGTCCAAGAGCC
...................................................((((((....(((.(((((.(((((((.....)).))))).((((......))))..)))))))).(((((.......)))))))))))..............................................................................................................
..................................................51.................................................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189782SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189787GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
............................................................................................................................TGAAGCAGTGGATAGGATAGTG........................................................................................................227.000.001.00--------2.002.00-1.00---------1.00---------
............................................................................................................................TGAAGCAGTGGATAGGATAGTT........................................................................................................227.000.00--1.001.00-1.00-1.001.001.00-------1.00--------------
......................................................................................................................................................................................................................................ACTTCACAGGTCCAAGAGC.1915.005.00----5.00---------------------------
............................................................................................................................TGAAGCAGTGGATAGGATTATT........................................................................................................224.000.002.00--1.00---1.00------------------------
............................................................................................................................TGAAGCAGTGGATAGGACTGT.........................................................................................................2113.001.00---1.00---1.00--1.00---------------------
............................................................................................................................TGAAGCAGTGGATAGGACTAT.........................................................................................................2113.001.00-----2.00--------------1.00-----------
............................................................................................................................TGAAGCAGTGGATAGGATAGT.........................................................................................................213.000.00-----1.00--1.001.00----------------------
............................................................................................................................TGAAGCAGTGGATAGGACAGT.........................................................................................................2113.001.00---1.00-1.00--1.00-----------------------
............................................................................................................................TGAAGCAGTGGATAGGATTGT.........................................................................................................212.000.00------------------------1.00-1.00-----
............................................................................................................................TGAAGCAGTGGATAGGGCTG..........................................................................................................202.000.00----------1.001.00--------------------
............................................................................................................................TGAAGCAGTGGATAGGATAG..........................................................................................................202.000.00-1.00-------------1.00----------------
............................................................................................................................TGAAGCAGTGGATAGGATAATT........................................................................................................222.000.00---1.00----------1.00-----------------
............................................................................................................................TGAAGCAGTGGATAGGATCGTT........................................................................................................222.000.00-----------1.00-1.00------------------
............................................................................................................................TGAAGCAGTGGATAGGATTAT.........................................................................................................212.000.002.00-------------------------------
............................................................................................................................TGAAGCAGTGGATAGGATTATC........................................................................................................221.000.00-----------1.00--------------------
......................................................................................................................................................................................................................................ACTTCACAGGTCCAAGACA.191.000.00----1.00---------------------------
............................................................................................................................................................................................CTTCTTGAATAGAAGACTGTCCC.......................................2311.001.00------1.00-------------------------
............................................................................................................................TGAAGCAGTGGATAGGATAGAA........................................................................................................221.000.00------------1.00-------------------
............................................................................................................................TGAAGCAGTGGATAGGATTA..........................................................................................................201.000.00-1.00------------------------------
............................................................................................................................TGAAGCAGTGGATAGGATTTTG........................................................................................................221.000.001.00-------------------------------
............................................................................................................................TGAAGCAGTGGATAGGGTAG..........................................................................................................201.000.00--------1.00-----------------------
........................................................................................................................TGGATGAAGCAGTGGATAGG..............................................................................................................2011.001.00---------------------1.00----------
............................................................................................................................TGAAGCAGTGGATAGGATTATG........................................................................................................221.000.001.00-------------------------------
............................................................................................................................TGAAGCAGTGGATAGGGCAG..........................................................................................................201.000.00-1.00------------------------------
............................................................................................................................TGAAGCAGTGGATAGGATTGTT........................................................................................................221.000.00---1.00----------------------------
............................................................................................................................TGAAGCAGTGGATAGGGCTA..........................................................................................................201.000.00----------1.00---------------------
............................................................................................................................TGAAGCAGTGGATAGGA.............................................................................................................1711.001.00--------------1.00-----------------
............................................................................................................................TGAAGCAGTGGATAGGATGGTTT.......................................................................................................231.000.00------1.00-------------------------
............................................................................................................................TGAAGCAGTGGATAGGGCTT..........................................................................................................201.000.00-------1.00------------------------
............................................................................................................................TGAAGCAGTGGATAGGCCAG..........................................................................................................201.000.00-1.00------------------------------
............................................................................................................................TGAAGCAGTGGATAGGGTAA..........................................................................................................201.000.00-1.00------------------------------
..................................................................................TGTTGCTGATTGAGAGAAGACTCA................................................................................................................................................2411.001.00-----------------------1.00--------
............................................................................................................................TGAAGCAGTGGATAGGGCCG..........................................................................................................201.000.00---------------1.00----------------
............................................................................................................................TGAAGCAGTGGATAGGATA...........................................................................................................191.000.00-1.00------------------------------
...................................................................................................................AATATTGGATGAAGCCCTT....................................................................................................................191.000.00---------------------------1.00----
............................................................................................................................TGAAGCAGTGGATAGGATGATG........................................................................................................221.000.001.00-------------------------------
............................................................................................................................TGAAGCAGTGGATAGGATCTTG........................................................................................................221.000.00---------1.00----------------------
................................................................................................AGAAGACTCACAATTCTT........................................................................................................................................1811.001.00-------------------1.00------------
............................................................................................................................TGAAGCAGTGGATAGGATAAT.........................................................................................................211.000.00----------------1.00---------------
........................................................TGAGATCATGGAATATATAG..............................................................................................................................................................................201.000.00-1.00------------------------------
............................................................................................................................TGAAGCAGTGGATAGGATAATG........................................................................................................221.000.00-------------------------1.00------
............................................................................................................................TGAAGCAGTGGATAGGATATAT........................................................................................................221.000.00---1.00----------------------------
............................................................................................................................TGAAGCAGTGGATAGGATGGCT........................................................................................................221.000.00------1.00-------------------------
............................................................................................................................TGAAGCAGTGGATAGGATCATT........................................................................................................221.000.00-------------1.00------------------
............................................................................................................................TGAAGCAGTGGATAGGACAG..........................................................................................................2011.001.00-1.00------------------------------
............................................................................................................................TGAAGCAGTGGATAGGATGGTT........................................................................................................221.000.00-------1.00------------------------
.......................................................TTGAGATCATGGAATTCA.................................................................................................................................................................................181.000.00--------1.00-----------------------
.................................................................................................................................................................................................TGAATAGAAGACTGTC.........................................1620.500.50------------------------------0.50-
..............................................................................................................................................................................................TCTTGAATAGAAGAC.............................................1570.140.14-------------------------------0.14

Antisense strand
CTCCAGTTTTAATTTTATAAACTAAATACCTGACAATTTATATCTATAAAGCCTGTTGAGATCATGGAATATTAGCACTTATTGTTGCTGATTGAGAGAAGACTCACAATTCTTGAATATTGGATGAAGCAGTGGATAGGATGTCATTGATGTTCTGCCAAAAAAGTTCATGTATTAAACCAAAGTTCCTTCTTGAATAGAAGACTGTCCCATCTCTACCCATAGGCTCCACTTCACAGGTCCAAGAGCC
...................................................((((((....(((.(((((.(((((((.....)).))))).((((......))))..)))))))).(((((.......)))))))))))..............................................................................................................
..................................................51.................................................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189782SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189787GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
................................................................................................................................................................................................................................GGCTCCACTTCACAGGTAAT...... 206.000.00--6.00-----------------------------
.........................................................................................................................................................TCTGCCAAAAAAGTTTTG............................................................................... 181.000.00-----------------------------1.00--
......................................................................................................................................................................................................................TCTACCCATAGGCTCCACAG................ 201.000.00------1.00-------------------------
......................................................................................................................................................................................................................TCTACCCATAGGCTCCAAG................. 191.000.00------1.00-------------------------
........................................................................................................................................................................................GTTCCTTCTTGAATAAACA............................................... 191.000.00------------------1.00-------------
................................................................................................................................................................................................................CCCATCTCTACCCATCGAG....................... 191.000.00----------------------------1.00---