uc003csh.1_intron_11_0_chr3_48225327

CCCATAGGTTTCTGTCTAGATTCTCCTGGGCCATTGGACAGTAAAGAAAAGTATGTATTCACTGCTTTCAAATGTTTATATGTAGAAAAAACGTGTCTAAACTTAAATACCTTATTTAAATGAAGTTCTTCATACACTGGACTGGAGCCCTGGATTTACCTGTGCCTAGAAACACTCTGGAATCTCAAGAATGAATAGTTTGTGTCAGCAATTTTCAGAACTTTTTCTCCTTTATTTTAGCTATAATTTT .......................................................................((((((...........))))))(((((...(((((((...)))))))(((((....)))))....)))))............................................................................................................ .................................................................66.............................................................................145.......................................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189784	SRR189785	SRR343334	SRR343335	SRR189786	SRR189782	SRR553576(SRX182782) source: Testis. (testes)	SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin)	SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver)	GSM532876(GSM532876) G547T. (cervix)	SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line)	SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.........................................................................................................................GAAGTTCTTCATACACTCAG.............................................................................................................	20		82.00	0.00	50.00	22.00	8.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................GAAGTTCTTCATACACTCAGA............................................................................................................	21		7.00	0.00	-	-	3.00	4.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................AAGTTCTTCATACACTCAG.............................................................................................................	19		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................GGGCCATTGGACAGTAAA.............................................................................................................................................................................................................	18	1	1.00	1.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
......................................................................AATGTTTATATGTAGAAAAAACGT............................................................................................................................................................	24	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
.........................................................................................................................GAAGTTCTTCATACACTCCG.............................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................................CAATTTTCAGAACTTTTTCTCCTTTATTTTAG..........	32	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-
.........................................................................................................................GAAGTTCTTCATACACCCAG.............................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................TGGGCCATTGGACAGTAAAG............................................................................................................................................................................................................	20	1	1.00	1.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.........................................................................................................................GAAGTTCTTCATACACTCAA.............................................................................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............TCTAGATTCTCCTGGGCCATTGGACAGT................................................................................................................................................................................................................	28	1	1.00	1.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
..........................................................................................................................................GGACTGGAGCCCTGGCCGT.............................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
...................ATTCTCCTGGGCCATTGGACA..................................................................................................................................................................................................................	21	1	1.00	1.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
.........................................................................................................................GAAGTTCTTCATACACTC...............................................................................................................	18		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................GAATCTCAAGAATGAACAC....................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-
.........................................................................................................................GAAGTTCTTCATACACTCAGG............................................................................................................	21		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..............................................................................................................CTTATTTAAATGAAGTCGGA........................................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
.................................TTGGACAGTAAAGAAAA........................................................................................................................................................................................................	17	2	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	0.50	-
............................................................................................................................................................TACCTGTGCCTAGAA...............................................................................	15	6	0.17	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.17

CCCATAGGTTTCTGTCTAGATTCTCCTGGGCCATTGGACAGTAAAGAAAAGTATGTATTCACTGCTTTCAAATGTTTATATGTAGAAAAAACGTGTCTAAACTTAAATACCTTATTTAAATGAAGTTCTTCATACACTGGACTGGAGCCCTGGATTTACCTGTGCCTAGAAACACTCTGGAATCTCAAGAATGAATAGTTTGTGTCAGCAATTTTCAGAACTTTTTCTCCTTTATTTTAGCTATAATTTT
.......................................................................((((((...........))))))(((((...(((((((...)))))))(((((....)))))....)))))............................................................................................................
.................................................................66.............................................................................145.......................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189784

SRR189785

SRR343334

SRR343335

SRR189786

SRR189782

SRR553576(SRX182782)
source: Testis. (testes)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

GSM532876(GSM532876)
G547T. (cervix)

SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)

SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

.........................................................................................................................GAAGTTCTTCATACACTCAG.............................................................................................................

82.00

0.00

50.00

22.00

8.00

1.00

.........................................................................................................................GAAGTTCTTCATACACTCAGA............................................................................................................

7.00

0.00

3.00

4.00

..........................................................................................................................AAGTTCTTCATACACTCAG.............................................................................................................

2.00

0.00

2.00

...........................GGGCCATTGGACAGTAAA.............................................................................................................................................................................................................

1.00

......................................................................AATGTTTATATGTAGAAAAAACGT............................................................................................................................................................

1.00

.........................................................................................................................GAAGTTCTTCATACACTCCG.............................................................................................................

1.00

0.00

1.00

................................................................................................................................................................................................................CAATTTTCAGAACTTTTTCTCCTTTATTTTAG..........

1.00

.........................................................................................................................GAAGTTCTTCATACACCCAG.............................................................................................................

1.00

0.00

1.00

..........................TGGGCCATTGGACAGTAAAG............................................................................................................................................................................................................

1.00

.........................................................................................................................GAAGTTCTTCATACACTCAA.............................................................................................................

1.00

0.00

1.00

..............TCTAGATTCTCCTGGGCCATTGGACAGT................................................................................................................................................................................................................

1.00

..........................................................................................................................................GGACTGGAGCCCTGGCCGT.............................................................................................

1.00

0.00

1.00

...................ATTCTCCTGGGCCATTGGACA..................................................................................................................................................................................................................

1.00

.........................................................................................................................GAAGTTCTTCATACACTC...............................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................GAATCTCAAGAATGAACAC....................................................

1.00

0.00

1.00

.........................................................................................................................GAAGTTCTTCATACACTCAGG............................................................................................................

1.00

0.00

1.00

..............................................................................................................CTTATTTAAATGAAGTCGGA........................................................................................................................

1.00

0.00

1.00

.................................TTGGACAGTAAAGAAAA........................................................................................................................................................................................................

0.50

............................................................................................................................................................TACCTGTGCCTAGAA...............................................................................

0.17