ID: uc002yzq.1_intron_29_0_chr21_43299250_r
GENE: PRDM15(1)
chr21:43299200-43299428-


(1)
AGO2.ip
(8)
B-CELL
(1)
BRAIN
(12)
BREAST
(29)
CELL-LINE
(12)
CERVIX
(4)
HEART
(2)
HELA
(2)
LIVER
(1)
OTHER
(19)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
TCGCAACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGGTAAAGCTCCGGGCCCTGCGCCCGCCGCCCGCCCCGGCGTGCGCCCCGCCGGCCCCGGGCCGCACCCGCTGCCCCCGCGAGCCCCGGCGCGCCCTGGGCCCGCTGCCCCCCGCCCCCCGCGCCCGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGCCGACTGTTCTTTGTTACATT
.......................................................((.(((((.((.(((..(((((((......)))).)))...))).)).))))))).......................................................................................................................
..................................................51...............................................................116...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
TAX577741(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189783TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038862(GSM458545)
MM472. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR040008(GSM532893)
G727N. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040035(GSM532920)
G001T. (cervix)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532877(GSM532877)
G691N. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577739(Rovira)
total RNA. (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040006(GSM532891)
G601N. (cervix)
TAX577738(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................CCCCGCCGGCCCCGGGGGA.....................................................................................................................196.000.003.00--3.00---------------------------------------------------------------------------------------------
...............................CTGCACATTCCAAAGGCAGGT.................................................................................................................................................................................2114.004.00-4.00-----------------------------------------------------------------------------------------------
................................................................................................CGCCGGCCCCGGGCCGCCGG.................................................................................................................203.000.001.00--1.00---------------------------------1.00-----------------------------------------------------------
..........GAGTCCGGATCCGATCCCGC.......................................................................................................................................................................................................2013.003.00--3.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................CCCCCCGCGCCCGGCA...................................................1652.802.801.60--1.000.20--------------------------------------------------------------------------------------------
........................................................................CGCCGCCCGCCCCGGCGGCGG........................................................................................................................................212.000.002.00------------------------------------------------------------------------------------------------
.....................................................AAGCTCCGGGCCCTGCGC..............................................................................................................................................................1812.002.00-----------2.00-------------------------------------------------------------------------------------
.................................................................................................GCCGGCCCCGGGCCGCCGG.................................................................................................................192.000.00---1.00----------------------------------------1.00----------------------------------------------------
..................................................GTAAAGCTCCGGGCCCTG.................................................................................................................................................................1812.002.00-2.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGGGGA......................................................201.000.001.00------------------------------------------------------------------------------------------------
.CGCAACCCGGAGTCCGGA..................................................................................................................................................................................................................1811.001.00------------------------------------------------------------1.00------------------------------------
...............................................................................................CCGCCGGCCCCGGGCCACCA..................................................................................................................201.000.001.00------------------------------------------------------------------------------------------------
...............CGGATCCGATCCCGCTCTGCACATTCCAAAGGC.....................................................................................................................................................................................3311.001.00---------1.00---------------------------------------------------------------------------------------
................................................................................................CGCCGGCCCCGGGCCTTC...................................................................................................................181.000.00---------------------------1.00---------------------------------------------------------------------
.............TCCGGATCCGATCCCGCTCTGCACACTCC...........................................................................................................................................................................................291.000.00-------------------------------------------------------------1.00-----------------------------------
.....................................................................................................................................................CCGCTGCCCCCCGCCCACC.............................................................191.000.00-------------------------------------------------------1.00-----------------------------------------
.................................................................................CCCCGGCGTGCGCCCCTG..................................................................................................................................181.000.00------------------------------1.00------------------------------------------------------------------
............................................AGGCAGGTAAAGCTCCGGGCCCTGC................................................................................................................................................................2511.001.00------------------------------------------------------------------------------1.00------------------
...........................................................................................................................CCCGCGAGCCCCGGCGCGGGG.....................................................................................211.000.00---------------------------------------------------------------------------1.00---------------------
...........................................................................................CGCCCCGCCGGCCCCGGG........................................................................................................................1811.001.00--------1.00----------------------------------------------------------------------------------------
...............................................................................................CCGCCGGCCCCGGGCCGGGGG.................................................................................................................211.000.00---1.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGGGGG......................................................201.000.001.00------------------------------------------------------------------------------------------------
................................................................CCTGCGCCCGCCGCCCGCCCCG...............................................................................................................................................2211.001.00---------------------------------1.00---------------------------------------------------------------
...............................................................................................CCGCCGGCCCCGGGCTGGG...................................................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------
........................................................................................................................GCCCCCGCGAGCCCCGGGGA.........................................................................................201.000.001.00------------------------------------------------------------------------------------------------
..............................................................................................CCCGCCGGCCCCGGGTC......................................................................................................................171.000.00-------------------------------------------------------------------------1.00-----------------------
..........................................................................................GCGCCCCGCCGGCCCCGGATC......................................................................................................................211.000.00---------------------------------------------------------1.00---------------------------------------
..................................................................................CCCGGCGTGCGCCCCCT..................................................................................................................................171.000.00-------------------------------------------------------------------1.00-----------------------------
..............................................................................................................................GCGAGCCCCGGCGCGAG......................................................................................171.000.00------------------------1.00------------------------------------------------------------------------
............GTCCGGATCCGATCCCGCTCTGC..................................................................................................................................................................................................2311.001.00----------------------1.00--------------------------------------------------------------------------
........CGGAGTCCGGATCCGATCCCGCTCT....................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------1.00-------------------------
.......................................................................CCGCCGCCCGCCCCGGCGGGC.........................................................................................................................................211.000.00-------1.00-----------------------------------------------------------------------------------------
.......................................................................CCGCCGCCCGCCCCGGGG............................................................................................................................................181.000.00---------------------------1.00---------------------------------------------------------------------
................................................AGGTAAAGCTCCGGGCCCTGC................................................................................................................................................................2111.001.00------1.00------------------------------------------------------------------------------------------
..................................................................................................CCGGCCCCGGGCCGCCGG.................................................................................................................181.000.001.00------------------------------------------------------------------------------------------------
........................................................................................................................GCCCCCGCGAGCCCCGGG...........................................................................................181.000.00--------------1.00----------------------------------------------------------------------------------
.............................CTCTGCACATTCCAAAGGC.....................................................................................................................................................................................1911.001.00---------1.00---------------------------------------------------------------------------------------
.....................CGATCCCGCTCTGCACATTCCAAAGGCAG...................................................................................................................................................................................2911.001.00------------------------------------1.00------------------------------------------------------------
....................................................................................................................................CCCGGCGCGCCCTGGGAGAG.............................................................................201.000.00-----------------------------------------------------------1.00-------------------------------------
...............................................CAGGTAAAGCTCCGGGC.....................................................................................................................................................................1711.001.00---------1.00---------------------------------------------------------------------------------------
................................................AGGTAAAGCTCCGGGCCCT..................................................................................................................................................................1911.001.00--1.00----------------------------------------------------------------------------------------------
......................................................................CCCGCCGCCCGCCCCGGGG............................................................................................................................................191.000.00--------------1.00----------------------------------------------------------------------------------
.......................................................................................................................TGCCCCCGCGAGCCCCG.............................................................................................1711.001.001.00------------------------------------------------------------------------------------------------
..................ATCCGATCCCGCTCTG...................................................................................................................................................................................................1611.001.00----------1.00--------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGGCGA......................................................201.000.001.00------------------------------------------------------------------------------------------------
..............................TCTGCACATTCCAAAGGCAGG..................................................................................................................................................................................2111.001.00------1.00------------------------------------------------------------------------------------------
...............................CTGCACATTCCAAAGGCAGG..................................................................................................................................................................................2011.001.00----1.00--------------------------------------------------------------------------------------------
................................................................................................................................GAGCCCCGGCGCGCCGGGC..................................................................................191.000.00---------------------------------------------------------------1.00---------------------------------
...................................................................................................................................CCCCGGCGCGCCCTGAC.................................................................................171.000.00-----------------------------------------1.00-------------------------------------------------------
.........................................................................................TGCGCCCCGCCGGCCCCG..........................................................................................................................1821.001.00-----------1.00-------------------------------------------------------------------------------------
.................................................................CTGCGCCCGCCGCCCGCCC.................................................................................................................................................1920.500.50----------------------------------------------------------------------------------------0.50--------
........................................................................................GTGCGCCCCGCCGGC..............................................................................................................................1540.250.25-------------------------------------------------------------------------------------------0.25-----
..................................................................................................................................................................................GCCGCGCGCCGCCCCG...................................1640.250.25--------------------------------0.25----------------------------------------------------------------
.....................................................................GCCCGCCGCCCGCCCCG...............................................................................................................................................1770.140.14---------------------------------0.14---------------------------------------------------------------
..............................................................................................................................................................CCCGCCCCCCGCGCCCG......................................................1780.120.120.12------------------------------------------------------------------------------------------------
...............................................................................................................................................................CCGCCCCCCGCGCCCGGC....................................................1880.120.12----------------------------------------------------------------------------------------------0.12--
......................................................................CCCGCCGCCCGCCCCGGC.............................................................................................................................................1880.120.12----------------------------------0.12--------------------------------------------------------------

Antisense strand
TCGCAACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGGTAAAGCTCCGGGCCCTGCGCCCGCCGCCCGCCCCGGCGTGCGCCCCGCCGGCCCCGGGCCGCACCCGCTGCCCCCGCGAGCCCCGGCGCGCCCTGGGCCCGCTGCCCCCCGCCCCCCGCGCCCGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGCCGACTGTTCTTTGTTACATT
.......................................................((.(((((.((.(((..(((((((......)))).)))...))).)).))))))).......................................................................................................................
..................................................51...............................................................116...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
TAX577741(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189783TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038862(GSM458545)
MM472. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR040008(GSM532893)
G727N. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040035(GSM532920)
G001T. (cervix)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532877(GSM532877)
G691N. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577739(Rovira)
total RNA. (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040006(GSM532891)
G601N. (cervix)
TAX577738(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................................................................................................................................CGCGCGCCGCCCCGGCGC............................... 186.000.00--------1.00----------2.00--------------1.00--------1.00------------------------1.00----------------------------
.........................................................................................................................................................................................CGGCTGGACCGGGGCGGC.......................... 1814.004.00---------------1.00------1.00---------------1.00-------------------------1.00--------------------------------
...........................................................................................................................CCCGCGAGCCCCGGCGT......................................................................................... 174.000.00-------------3.00----------------------------------------------------------------------1.00------------
........................................................................................................................................................................................GCGGCTGGACCGGGGCGGCG......................... 2014.004.00----1.001.00------1.00----1.00-------------------------------------------------------------------------------
...............................................................................................................................................................................................................ATGTAACAAAGAACAGTCGGC. 2113.003.00------------------2.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................GCGGCTGGACCGGGGCGG......................... 1813.003.00-----1.00--------------------1.00-------------------------1.00--------------------------------------------
.......................................................................................................................................................................................................AACAGTCGGCATGGCGGC............ 1813.003.00-2.00----------------------------------------------1.00------------------------------------------------
.............................................................................................................................................................................................................TAACAAAGAACAGTCGGCAT.... 2013.003.00-------3.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................................................ATGTAACAAAGAACAGTCGG. 2013.003.00--3.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................TGGCGGCTGGACCGGGGCGG....................... 2012.002.00------2.00------------------------------------------------------------------------------------------
....................................................................CGCCCGCCGCCCGCCCCAAAA............................................................................................................................................ 212.000.00-------------------------------2.00-----------------------------------------------------------------
.....................................................................................................................................................................................................AAGAACAGTCGGCATGGCGGCTG......... 2312.002.00----------2.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................GTCGGCATGGCGGCTGGACCGGG................ 2312.002.00------1.00-------------1.00----------------------------------------------------------------------------
.............................................................................................................................................................................CGGCAGCCGCGCGCCGCG...................................... 182.000.00-1.00--------------------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................GCCGCGCGCCGCCCCGCC................................. 182.000.00-----------------------1.00----------------------------------------------------------1.00--------------
...............................................................................................................................................................................................GTCGGCATGGCGGCTGGACCGG................ 2212.002.00----------------------------2.00--------------------------------------------------------------------
.........................................................................................................................................................................................................AGAACAGTCGGCATGGCG.......... 1812.002.00-----------------------------2.00-------------------------------------------------------------------
....................................................................................................................................................................................CGCGCGCCGCCCCGGCG................................ 172.000.00--------------1.00---------1.00------------------------------------------------------------------------
...........................................................................................................................................................................................TGGCGGCTGGACCGGGGCG....................... 1912.002.00-2.00-----------------------------------------------------------------------------------------------
......................................................................................................................................................................................GGCTGGACCGGGGCGGCGCG........................... 2012.002.00--2.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AAGAACAGTCGGCATGGC......... 1812.002.00----------------------------------------------------------------------------1.00---1.00----------------
............................................................................................................................................................................................................TAACAAAGAACAGTCGGCATG.... 2112.002.00----------------2.00--------------------------------------------------------------------------------
..................................................................................................................................................................CCCCCCGCGCCCGGCGA.................................................. 172.000.002.00------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................GTAACAAAGAACAGTCGGCATGG... 2312.002.00----2.00--------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ATGTAACAAAGAACAGTCGGCA. 2212.002.00-----2.00-------------------------------------------------------------------------------------------
.............................................................................................CCCCGCCGGCCCCGGGG....................................................................................................................... 171.000.001.00------------------------------------------------------------------------------------------------
..............................................................GCCCTGCGCCCGCCGGC...................................................................................................................................................... 171.000.00---------------------------------------------------------------------1.00---------------------------
................................................................CCTGCGCCCGCCGCCCAAAT................................................................................................................................................. 201.000.00-----------------------------------------------------1.00-------------------------------------------
.............................................................................................................................................................................................................TGTAACAAAGAACAGTCGGCAT.. 2211.001.00------------------------------------------------------------------1.00------------------------------
....................................................................................................................................................................................CGCGCGCCGCCCCGGCGCG.............................. 191.000.00-------------------------------------------------------------------------------------1.00-----------
...........................................................................................................................................CGCCCTGGGCCCGCTGGGGG...................................................................... 201.000.00--------------------------------------------------------------------------1.00----------------------
.........................................................................................................................................................................................................AACAAAGAACAGTCGGCATGGCG..... 2311.001.00------------------------------------------1.00------------------------------------------------------
...........................................................................................................................................................................................................ATGTAACAAAGAACAGTCGGCATGG. 2511.001.00--------------------------------1.00----------------------------------------------------------------
.........................................................................................................................................................................................TGGCGGCTGGACCGGGGCGGC....................... 2111.001.00-----------------------------------------------------------------------------1.00-------------------
...................................................................................................................................................................................CCGCGCGCCGCCCCGGTCCAGCA........................... 231.000.00-----------------1.00-------------------------------------------------------------------------------
.............................................................................................CCCCGCCGGCCCCGGGGACC.................................................................................................................... 201.000.00---1.00---------------------------------------------------------------------------------------------
...................................................................GCGCCCGCCGCCCGCCCTGG.............................................................................................................................................. 201.000.00-----------------------------------1.00-------------------------------------------------------------
.............................................................................................................................................................................CGGCAGCCGCGCGCCCA....................................... 171.000.00---------------------1.00---------------------------------------------------------------------------
.....................................................................................................................................................................................CGGCTGGACCGGGGCGGCGCGC.......................... 2211.001.00------------------------------------------------------------------------1.00------------------------
..........................................................................................GCGCCCCGCCGGCCCCGGGGGGA.................................................................................................................... 231.000.001.00------------------------------------------------------------------------------------------------
......................................................................................................................................................................CCGCGCCCGGCAGCCGTAGG........................................... 201.000.00------------------------------------------------------1.00------------------------------------------
.....................................................................................................................................................CCGCTGCCCCCCGCCCCCCTGC.......................................................... 221.000.00------------------------------1.00------------------------------------------------------------------
................................................................................................................................................................................................................GTAACAAAGAACAGTCGG... 1811.001.00---------------------------------------------1.00---------------------------------------------------
....................................................................................................................................................................................................................CTGTTCTTTGTTACATCCGG 201.000.00--------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCCGACTGTTCTTTGTTACG.. 201.000.00--1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................ACAAAGAACAGTCGGCATGG...... 2011.001.00---------------1.00---------------------------------------------------------------------------------
....................................................................CGCCCGCCGCCCGCCCAGC.............................................................................................................................................. 191.000.00---------------------1.00---------------------------------------------------------------------------
...........................................................................................................................................................................................................AACAAAGAACAGTCGGCATGG..... 2111.001.00----------------------------------------------------------------------1.00--------------------------
..............TGCAGAGCGGGATCGGATCCGG................................................................................................................................................................................................. 2211.001.00--------------------------1.00----------------------------------------------------------------------
.............................................................................................................................................................GCCGGGCGCGGGGGGCGGGG.................................................... 2021.001.00--------------------------------------------------------------1.00----------------------------------
...............................................................................................................................................................................................................TAACAAAGAACAGTCGGC.... 1811.001.00-----1.00-------------------------------------------------------------------------------------------
......................................................................................................................................................CGCTGCCCCCCGCCCCCATAA.......................................................... 211.000.00---------------------------------------------------1.00---------------------------------------------
.................................................................CTGCGCCCGCCGCCCATAT................................................................................................................................................. 191.000.001.00------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGTGGG...................................................... 201.000.00-----------------------1.00-------------------------------------------------------------------------
..........................................................................................GCGCCCCGCCGGCCCCGG......................................................................................................................... 181.000.00-----------------------------------------------1.00-------------------------------------------------
............................................................................................................................................................................................GCGGCTGGACCGGGGC......................... 1611.001.00------------1.00------------------------------------------------------------------------------------
............................................................................................................................................................................................CATGGCGGCTGGACCGGGGC..................... 2011.001.00------1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................GTAACAAAGAACAGTCGGCA... 2011.001.00----------1.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TAACAAAGAACAGTCGGCA.... 1911.001.00---------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................................CCCCCCGCGCCCGGCGTG................................................. 181.000.00----1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGGACCGGGGCGGCGCGCGG............................. 2111.001.00----1.00--------------------------------------------------------------------------------------------
..........GCGGGATCGGATCCGGACTC....................................................................................................................................................................................................... 2011.001.00---------------------------------------------------------------------------------1.00---------------
.......................................................................CCGCCGCCCGCCCCGGCACCG......................................................................................................................................... 211.000.00-------------------------------------------------------------------------------1.00-----------------
.............................................................................................................................................................................................CCCCGGTCCAGCCGCTGG...................... 181.000.00---------------------------------------------------------------------------------------1.00---------
...........................................................................................CGCCCCGCCGGCCCCGGGG....................................................................................................................... 1911.000.00-----------------------------------------------------------------1.00-------------------------------
..............................................................................................CCCGCCGGCCCCGGGCCG..................................................................................................................... 181.000.001.00------------------------------------------------------------------------------------------------
.............................................................................................................CCGCACCCGCTGCCCCGCT..................................................................................................... 191.000.00-------------------------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................AAAGAACAGTCGGCATGG........ 1811.001.00-----1.00-------------------------------------------------------------------------------------------
...................................................................GCGCCCGCCGCCCGCCCCC............................................................................................................................................... 191.000.00-------------------------1.00-----------------------------------------------------------------------
..........................................................................................GCGCCCCGCCGGCCCTGG......................................................................................................................... 181.000.00--------------------------------------------------------1.00----------------------------------------
..........................................................................................................................................................................................................GCCATGCCGACTGTTCTTA........ 191.000.00--------------------------------------------------------------------------------------1.00----------
.........................................................................................................................................................................................ATGGCGGCTGGACCGGGGCGGC...................... 2211.001.00---------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCAGCCGCGCGCCGC....................................... 171.000.00--------------------------------------------------1.00----------------------------------------------
..........................................................................................................................................................................................CATGGCGGCTGGACCGGGGCGG..................... 2211.001.00--1.00----------------------------------------------------------------------------------------------
......................................................................................................CCCCGGGCCGCACCCGCGGG........................................................................................................... 201.000.001.00------------------------------------------------------------------------------------------------
..........................................................................................GCGCCCCGCCGGCCCCGGGGGG..................................................................................................................... 221.000.00---1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................................CGGCTGGACCGGGGCGGCG.......................... 1911.001.00----------------------------------------------1.00--------------------------------------------------
...........................................................................................................................................................................................................AATGTAACAAAGAACAGTCGGCATGG 2611.001.00-------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................................................GCCGCGCGCCGCCCCGC.................................. 171.000.00------------1.00------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AAGAACAGTCGGCATGGCG......... 1911.001.00----------------1.00--------------------------------------------------------------------------------
..........................................................................................................................................GCGCCCTGGGCCCGCTTGG........................................................................ 191.000.00-------------------------------------------------1.00-----------------------------------------------
..........................................................................................................................................................................................................AAAGAACAGTCGGCATGGC........ 1911.001.00-----------------------------------------------------------------------------------1.00-------------
................................................................................................................................................................................................CGGCATGGCGGCTGGACCG.................. 1911.001.00----------------------------------------------------------1.00--------------------------------------
................................................................................................................................................................................CAGCCGCGCGCCGCCCCGGAGC............................... 221.000.00---------------------------------------1.00---------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGT......................................................... 171.000.00--------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................GGGGGGCGGGGGGCAGCGG............................................................. 1920.500.50-----------------------------------------------------------------------------------------0.50-------
.......CGGATCCGGACTCCGG.............................................................................................................................................................................................................. 1620.500.50------------------------------------------------------------------------------------------0.50------
...............................................................................................................................................................................................TGGCGGCTGGACCGG....................... 1530.330.33----0.33--------------------------------------------------------------------------------------------
...............................................................................................................................................................GCCGGGCGCGGGGGGCGG.................................................... 1880.250.25-----------------------------------------------------------------------------------------------0.120.12
.....................................................................................................GGTGCGGCCCGGGGC................................................................................................................. 1570.140.14--------------------------------------------------------------------------------------------0.14----
..................................................................CGGGCGGCGGGCGCA.................................................................................................................................................... 1580.120.12---------------------------------------------------------------------------------------------0.12---