ID: uc002wsb.2_intron_0_0_chr20_21106846_f.5p
GENE: (1)
chr20:21106796-21107045+


(1)
AGO2.ip
(12)
B-CELL
(2)
BRAIN
(19)
BREAST
(51)
CELL-LINE
(5)
CERVIX
(5)
FIBROBLAST
(1)
HEART
(3)
HELA
(3)
LIVER
(1)
OTHER
(44)
SKIN
(1)
XRN.ip

Sense strand
CCCGACTACTACGAGAGGCTGGGCCAACTCCAGCACGGGCTGCGGGACAGGTAAGGGCACTGGGGCGGGGGTGGGGAGTCGGCCCGCGCCGGGGGTCTTCCGCGTGCCCTGCCCCATTTTCCTTCCCGCTCCCCCGTCCGAGGTTCCCCGGGGCCCAGGCCCGCGCGCAACGCCCCCCAGGCTCCCAGTGGGGCCTGGAGGACAGTGTTTACTAGAGCCACCCCCTGTATTGGGGGTGGGAGCGGAGAGA
.............................................................(((((((((((((((((.((((....))))(((((..............)))))......))))))))))))..((.((.((....)).((((....)))).)).))...)))))(((((((((....)))))))))....................................................
.............................................................62........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR038861(GSM458544)
MM466. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038860(GSM458543)
MM426. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM416733(GSM416733)
HEK293. (cell line)
SRR038855(GSM458538)
D10. (cell line)
TAX577741(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
TAX577579(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040041(GSM532926)
G612T. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM532877(GSM532877)
G691N. (cervix)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040032(GSM532917)
G603N. (cervix)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR037938(GSM510476)
293Red. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
.....................................................................................................................................................................................CTCCCAGTGGGGCCTCCA...................................................18790.000.0060.0067.0068.0040.0041.0031.0032.0025.0023.0019.0019.0018.0017.0018.0016.0015.0015.0010.0014.0013.009.0010.0010.008.006.001.007.007.007.007.003.006.006.006.005.005.005.00-1.005.00-5.004.00-4.004.002.002.00-4.00-3.003.003.001.003.00-3.002.003.00-1.002.002.002.00-1.00-2.002.002.002.00-1.002.00-2.002.002.00-2.00-1.00-1.001.00---1.001.001.001.00--1.001.001.001.00-1.001.00--1.001.001.001.001.001.00-1.00--1.001.00-1.001.001.001.00-1.001.001.00-1.001.00-1.001.001.001.001.00-1.001.00-1.001.00--1.001.00----
....................................................................................................................................................................................GCTCCCAGTGGGGCCTCCA...................................................1960.000.0015.00--17.001.00------------4.00----1.00--6.00--------------5.00--2.00--2.00-----------1.00----------------------2.00------------------------------1.00---1.00----1.00------------------1.00-------
...................................................................................................................................................................................GGCTCCCAGTGGGGCCTCCA...................................................2045.500.251.25--0.25-------------0.75--1.50----0.50------------------0.25----------------------------------------0.25-----------------------------------------------------------0.250.250.25
.............AGAGGCTGGGCCAACTC............................................................................................................................................................................................................................1723.503.50--------------------------------------------------3.50-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCAGTGGGGCCTCAA...................................................183.000.002.00-----------1.00---------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCAGTGGGGCCTTCA...................................................183.000.00-2.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCAGTGGGGCCTCTA...................................................182.000.00-------------------1.00-----------------------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................GCTCCCAGTGGGGCCTCTA...................................................192.000.00-------------------------------------------2.00--------------------------------------------------------------------------------------------------------
..................................................................GGGGGTGGGGAGTCGTCGT.....................................................................................................................................................................191.000.00-----------------------------------------------------------------------------------------------------------------1.00----------------------------------
.................................................GGTAAGGGCACTGGGAAGA......................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCAGTGGGGCCTACA...................................................181.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................ACTGGGGCGGGGGTGGGAGGG...........................................................................................................................................................................211.000.00---------------------------------------------------------------------------1.00------------------------------------------------------------------------
.CCGACTACTACGAGAGGCTGGG...................................................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00-------------
.....................................................................................................................................................................................................................................TTGGGGGTGGGAGCGAGGG..191.000.00---------------------------------------------------------------------------------------1.00------------------------------------------------------------
.......................CCAACTCCAGCACGGGC..................................................................................................................................................................................................................1711.001.00-----------------------------------------------------------------------------------------------------------------------------1.00----------------------
................................GCACGGGCTGCGGGACAGGTAAGG..................................................................................................................................................................................................2411.001.00------------------------------------------------------------------------1.00---------------------------------------------------------------------------
.................................CACGGGCTGCGGGACGGC.......................................................................................................................................................................................................1821.000.50----------------------------------------------------------------------------------1.00-----------------------------------------------------------------
......................................................................................CGCCGGGGGTCTTCCCA...................................................................................................................................................171.000.00------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.......ACTACGAGAGGCTGGGCC.................................................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------------------------------------------------------------1.00-------------------
.........................AACTCCAGCACGGGCTGC...............................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------------------------1.00---------------------------------------------
....................................................................................................................................................................................GCTCCCAGTGGGGCCTTCA...................................................191.000.00-------------------------------------------------------------------------------------------------------1.00--------------------------------------------
..........................................................................................................................................................................................AGTGGGGCCTGGAGGAGGAG............................................201.000.00------------------------------------------------------------------------1.00---------------------------------------------------------------------------
............................TCCAGCACGGGCTGCGGGACAGGTAAGGG.................................................................................................................................................................................................2911.001.00--------------------------------------------------------------------------------------------------------------1.00-------------------------------------
..............................CAGCACGGGCTGCGGGACAGG.......................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------1.00----------------------------------------------------------------
...............................................................................CGGCCCGCGCCGGGGT...........................................................................................................................................................161.000.00------------------------1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................................TTCCTTCCCGCTCCCGC...................................................................................................................171.000.00-------------------------------------------------------------------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................TTACTAGAGCCACCCTT.........................171.000.00----------------------------------------------------------------------------------------1.00-----------------------------------------------------------
.............AGAGGCTGGGCCAACTCCA..........................................................................................................................................................................................................................1911.001.00--------------------------------------------------------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................CCCGGGGCCCAGGCCGGGG.....................................................................................191.000.00------------------------1.00---------------------------------------------------------------------------------------------------------------------------
....................................................AAGGGCACTGGGGCGGGGGTGGGGA.............................................................................................................................................................................2511.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................ACTGGGGCGGGGGTGGGGTAT...........................................................................................................................................................................211.000.00------------------------------1.00---------------------------------------------------------------------------------------------------------------------
..................................ACGGGCTGCGGGACAGG.......................................................................................................................................................................................................1720.500.50-----------------------------------------------------------------------------------0.50----------------------------------------------------------------
...................................................................................................................................................................................GGCTCCCAGTGGGGCCTTCA...................................................2040.500.25--------------------0.25----------------------0.25--------------------------------------------------------------------------------------------------------
.................................CACGGGCTGCGGGAC..........................................................................................................................................................................................................1520.500.50------------------------------------------------------------------------------------0.50---------------------------------------------------------------
................................GCACGGGCTGCGGGAC..........................................................................................................................................................................................................1620.500.50------------------------------------------------------------------------------------------------------------------------------------------------0.50---
...................................................................................................................................................................................GGCTCCCAGTGGGGCCT......................................................1740.250.25-------------------------------------------0.25--------------------------------------------------------------------------------------------------------
............................................................................................................................CCCGCTCCCCCGTCC...............................................................................................................1550.200.20--------------------------------------------------------------------------------------0.20-------------------------------------------------------------

Antisense strand
CCCGACTACTACGAGAGGCTGGGCCAACTCCAGCACGGGCTGCGGGACAGGTAAGGGCACTGGGGCGGGGGTGGGGAGTCGGCCCGCGCCGGGGGTCTTCCGCGTGCCCTGCCCCATTTTCCTTCCCGCTCCCCCGTCCGAGGTTCCCCGGGGCCCAGGCCCGCGCGCAACGCCCCCCAGGCTCCCAGTGGGGCCTGGAGGACAGTGTTTACTAGAGCCACCCCCTGTATTGGGGGTGGGAGCGGAGAGA
.............................................................(((((((((((((((((.((((....))))(((((..............)))))......))))))))))))..((.((.((....)).((((....)))).)).))...)))))(((((((((....)))))))))....................................................
.............................................................62........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR038861(GSM458544)
MM466. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038860(GSM458543)
MM426. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM416733(GSM416733)
HEK293. (cell line)
SRR038855(GSM458538)
D10. (cell line)
TAX577741(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
TAX577579(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040041(GSM532926)
G612T. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM532877(GSM532877)
G691N. (cervix)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040032(GSM532917)
G603N. (cervix)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR037938(GSM510476)
293Red. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
.....................................................................................CGGAAGACCCCCGGCGC.................................................................................................................................................... 1718.008.00------------------------------1.00------2.002.00---------1.00-----1.00-----1.00---------------------------------------------------------------------------------------
.....................................................................................GCGCCGGGGGTCTTCCGC................................................................................................................................................... 186.000.00------------------------------------------------2.00-------1.00---1.00--------------------------------1.00-------------------------------------------1.00----------
.....................................................................................GCGCCGGGGGTCTTCCGCGCT................................................................................................................................................ 216.000.00------------------------------1.00-------1.00--------1.00-----------------1.00-1.00-----------1.00--------------------------------------------------------------------
.....................................................................................GCGCCGGGGGTCTTCCGCGC................................................................................................................................................. 204.000.00-------------------------------------1.00----1.00----1.001.00---------------------------------------------------------------------------------------------------
.....................................................................................GCGCCGGGGGTCTTCCGCG.................................................................................................................................................. 192.000.00-------------------------------------1.00----------------1.00---------------------------------------------------------------------------------------------
.....................................................................................GCGCCGGGGGTCTTCCGTGCT................................................................................................................................................ 212.000.00--------------------------------------1.00----------------------------------------1.00--------------------------------------------------------------------
...............................................................................CGGCCCGCGCCGGGGCCGG........................................................................................................................................................ 191.000.00---------------------1.00------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................TGGGGGTGGGAGCGGCGG.. 181.000.00---------------------------------------------------------------------------------------------------1.00------------------------------------------------
...............................................................................................TCTTCCGCGTGCCCTAAAG........................................................................................................................................ 191.000.00---------------------------------------------------------------------------1.00------------------------------------------------------------------------
...................................................TAAGGGCACTGGGGCTGGA.................................................................................................................................................................................... 191.000.00--------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.................CCGTGCTGGAGTTGGCCCAGC.................................................................................................................................................................................................................... 2111.001.00--------------------------------------------------------------------------------------1.00-------------------------------------------------------------
................................................................................................................................................................................CCAGGCTCCCAGTGGGTG........................................................ 181.000.00----------------------------------------------------------------------------------------------1.00-----------------------------------------------------
.....................................................................................GCGCCGGGGGTCTTCCGTGC................................................................................................................................................. 201.000.00-------------------------------------------------------------------------1.00--------------------------------------------------------------------------
..............................CAGCACGGGCTGCGGTAG.......................................................................................................................................................................................................... 181.000.00---------------------------------------------------------------------------------------------------------------------------------------------1.00------
.....................................................................................GCGCCGGGGGTCTTCCGCGCA................................................................................................................................................ 211.000.00-------------------------------------1.00--------------------------------------------------------------------------------------------------------------
...........................................................................................GGGGTCTTCCGCGTGAAT............................................................................................................................................. 181.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGGCACTGGGGCTTT..................................................................................................................................................................................... 181.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CCTTCCCGCTCCCCCCAA................................................................................................................ 181.000.00------------------------------------------------------------------1.00---------------------------------------------------------------------------------
......................................................................................CGCCGGGGGTCTTCCGTCT................................................................................................................................................. 191.000.00-----------------------------------------------------------------1.00----------------------------------------------------------------------------------
....................................................................................CGCGCCGGGGGTCTTCCGTCG................................................................................................................................................. 211.000.00------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................ACCCCCGGCGCGGGC.......................................................................................................................................................... 1560.170.17---------------------------------------------------------------------------------------0.17------------------------------------------------------------