ID: uc002uht.2_intron_1_0_chr2_173599162_r.5p
GENE: (2)
chr2:173599823-173600072-


(4)
B-CELL
(10)
BRAIN
(14)
BREAST
(11)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(1)
LIVER
(4)
OTHER
(2)
SKIN
(2)
UTERUS

Sense strand
CGCCCGTCGAGTCTCTCAGTGAGGAATGAGAGGCCAGCTTCTCCTGCGGGGTGAGGAAGGGCTGGGCGCAATGGGGGGCAGTGCGGGCAGGGCTGAGGGGCAGGGAGGGAGGAGGCCGGTGGGCCCGATGTGGTCTGAGGGGGTGACAGGCTGAAGTCACTGGCCTTGAACCCTGGGCCTGCCTGGGCTTCCATCACCTGCATGGTGAAGAAAACACAGTTGAGAATGGGGAGTAGCCGGGCCACAGCAG
.........................................................................................(((((....(((.............)))....))))).....((((((.........))))))..................................................................................................
........................................................................................89...................................................................158..........................................................................................
SizePerfect hitTotal NormPerfect NormTAX577589(Rovira)
total RNA. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
TAX577580(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189787TAX577744(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR040034(GSM532919)
G001N. (cervix)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038857(GSM458540)
D20. (cell line)
SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR038853(GSM458536)
MELB. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
.............................................................................................TGAGGGGCAGGGAGGGAGGGTTT......................................................................................................................................2317.000.001.00---1.001.002.001.001.002.00-2.001.001.002.001.00-----------1.00--------------------------
.............................................................................................TGAGGGGCAGGGAGGGAGGCTTT......................................................................................................................................239.000.001.002.001.001.00-2.00----1.00--1.00----------------------------------------
.............................................................................................TGAGGGGCAGGGAGGGAGGGTT.......................................................................................................................................227.000.001.00-1.001.00----1.00------1.001.00---------1.00---------------------------
.............................................................................................TGAGGGGCAGGGAGGGAGGGTTA......................................................................................................................................234.000.00--1.001.00------1.00-------1.00-----------------------------------
.............................................................................................TGAGGGGCAGGGAGGGAGAGTT.......................................................................................................................................2262.670.170.170.17-0.17--0.17--0.500.170.17-----0.17-----------------0.170.17----0.17-0.170.17-----0.17---
.............................................................................................TGAGGGGCAGGGAGGGAGACTT.......................................................................................................................................2261.670.170.17-0.17--0.17-0.170.17--------0.17-0.17-------------0.17-0.17------------0.17-----
.............................................................................................TGAGGGGCAGGGAGGGAGAGT........................................................................................................................................2161.500.17------0.17-0.33---------0.33--------------0.17--------0.17----0.17----0.17-
.............................................................................................TGAGGGGCAGGGAGGGAGACT........................................................................................................................................2161.330.17--0.33-0.17-0.17--------------------------0.33------0.17-----0.17-------
.............................................................................................TGAGGGGCAGGGAGGGAGGCTT.......................................................................................................................................221.000.00-------------------1.00----------------------------------
..............................................................................................GAGGGGCAGGGAGGGAGGGTTT......................................................................................................................................221.000.00-1.00----------------------------------------------------
.............................................................................................TGAGGGGCAGGGAGGGAGGCTCT......................................................................................................................................231.000.00-------1.00----------------------------------------------
..................................................................................GCGGGCAGGGCTGAGGGG......................................................................................................................................................1811.001.00----------------------1.00-------------------------------
.......................................................................................................................................................................................................................................AGTAGCCGGGCCACAGGTG191.000.00-----------------------------1.00------------------------
.............................................................................................TGAGGGGCAGGGAGGGTGT..........................................................................................................................................191.000.00------------1.00-----------------------------------------
...................................................................................................GCAGGGAGGGAGGAGGTGC....................................................................................................................................191.000.00--------------------1.00---------------------------------
.............................................................................................TGAGGGGCAGGGAGGGAGGCT........................................................................................................................................211.000.00-----------------1.00------------------------------------
.............................................................................................TGAGGGGCAGGGAGGGAGGCTTG......................................................................................................................................231.000.001.00-----------------------------------------------------
.......................................................................................................................................TGAGGGGGTGACAGGATCG................................................................................................191.000.00---------------------1.00--------------------------------
...........................................................................................................GGAGGAGGCCGGTGGTAT.............................................................................................................................181.000.00------------------------1.00-----------------------------
....................................................................................................................................................................................................................AACACAGTTGAGAATG......................1630.670.67----------------------------------0.67-------------------
.............................................................................................TGAGGGGCAGGGAGGGAGACCT.......................................................................................................................................2260.330.17-------0.33----------------------------------------------
.............................................................................................TGAGGGGCAGGGAGGGAGTCTT.......................................................................................................................................2260.330.170.17------------------------------------------------0.17----
.............................................................................................TGAGGGGCAGGGAGGGAGCTT........................................................................................................................................2160.330.17-------------------------------------0.17-------0.17--------
.............................................................................................TGAGGGGCAGGGAGGGAGTGTT.......................................................................................................................................2260.170.17---------------------------------------------------0.17--
.............................................................................................TGAGGGGCAGGGAGGGAGAGTA.......................................................................................................................................2260.170.17--------------------------------------0.17---------------
.............................................................................................TGAGGGGCAGGGAGGGAGACTA.......................................................................................................................................2260.170.17-0.17----------------------------------------------------
.............................................................................................TGAGGGGCAGGGAGGGAG...........................................................................................................................................1860.170.17---------------------------------------0.17--------------
.............................................................................................TGAGGGGCAGGGAGGGAGACG........................................................................................................................................2160.170.17---0.17--------------------------------------------------
.............................................................................................TGAGGGGCAGGGAGGGAGAGC........................................................................................................................................2160.170.17------------------------------------0.17-----------------

Antisense strand
CGCCCGTCGAGTCTCTCAGTGAGGAATGAGAGGCCAGCTTCTCCTGCGGGGTGAGGAAGGGCTGGGCGCAATGGGGGGCAGTGCGGGCAGGGCTGAGGGGCAGGGAGGGAGGAGGCCGGTGGGCCCGATGTGGTCTGAGGGGGTGACAGGCTGAAGTCACTGGCCTTGAACCCTGGGCCTGCCTGGGCTTCCATCACCTGCATGGTGAAGAAAACACAGTTGAGAATGGGGAGTAGCCGGGCCACAGCAG
.........................................................................................(((((....(((.............)))....))))).....((((((.........))))))..................................................................................................
........................................................................................89...................................................................158..........................................................................................
SizePerfect hitTotal NormPerfect NormTAX577589(Rovira)
total RNA. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
TAX577580(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189787TAX577744(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR040034(GSM532919)
G001N. (cervix)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038857(GSM458540)
D20. (cell line)
SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR038853(GSM458536)
MELB. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
..ACTGAGAGACTCGACGGG...................................................................................................................................................................................................................................... 1812.002.00------------------------------1.001.00----------------------
....................................................................................................................................................................CTTGAACCCTGGGCCTTCCC.................................................................. 201.000.00----1.00-------------------------------------------------
..................................................................................................................................TGGTCTGAGGGGGTGGCCG..................................................................................................... 191.000.00-----------------------1.00------------------------------
................................................................................................................................TGTGGTCTGAGGGGGTGCTT...................................................................................................... 201.000.00-1.00----------------------------------------------------
..................................................................................................................................TGGTCTGAGGGGGTGTCG...................................................................................................... 181.000.00----------------1.00-------------------------------------
..................................................................................................................................TGGTCTGAGGGGGTGAACG..................................................................................................... 191.000.00----1.00-------------------------------------------------
.CTCACTGAGAGACTCGACGGGC................................................................................................................................................................................................................................... 2211.001.00-------------------------1.00----------------------------
................................GCCAGCTTCTCCTGCGTC........................................................................................................................................................................................................ 181.000.00--------------------------------1.00---------------------
....................GAGGAATGAGAGGCCACCA................................................................................................................................................................................................................... 191.000.00----------------------------1.00-------------------------
............................................................................................................................................................................................CATGCAGGTGATGGAA.............................................. 1680.120.12-----------------------------------------------------0.12