ID: uc002uey.2_intron_1_0_chr2_170419861_r.5p
GENE: FASTKD1(2)
chr2:170427963-170428212-


(2)
AGO2.ip
(5)
B-CELL
(6)
BRAIN
(2)
BREAST
(30)
CELL-LINE
(1)
CERVIX
(5)
HEART
(2)
HELA
(5)
LIVER
(2)
OTHER
(15)
SKIN
(1)
UTERUS

Sense strand
AAATTAATGAATGACGATACCCTGGTGAATGTGTTATACGTCACACAACAGTAAGTAATTTACTTTTATATTTTATGGAATGATTATATAGTTTACATTTTAATTTTCTAAAAATCTCTTTATTTTCATTTTATTTATTTATTTTTGAGGAGTCTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCGAGT
...................................................................................................................(((((((.......................)))))))..((((((.....))).)))..............................................................................
..................................................................................................................115......................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM956925PAZD5SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR038854(GSM458537)
MM653. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038857(GSM458540)
D20. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189787
.....................................................................................................................................................GAGTCTCTGTCGCCCAGAA..................................................................................199.000.00--------6.00---------3.00------------------------------------------------------------
...................................................................................................................CTCTTTATTTTCATTTTATTTATTTATTTTTG.......................................................................................................3217.007.00---1.004.00-2.00------------------------------------------------------------------------
..........................................................................................................................TTTTCATTTTATTTATTTATTTTTCAAG....................................................................................................284.000.00--2.002.00---------------------------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTTTTAAG....................................................................................................292.000.00---1.00---------1.00-----------------------------------------------------------------
..............................................................................................................................CATTTTATTTATTTATTTTTTTCG....................................................................................................242.000.00---1.00--1.00------------------------------------------------------------------------
...................................................................................................................................................................................................ACTGCAAGCTCTGCCTCCCAGTCGC..............................252.000.00-2.00-----------------------------------------------------------------------------
................................................................................................................................................................................................................CCTCCCAGGTTCACGCCATTCTCCTTTTC.............292.000.00--------------------------2.00----------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTGAGG......................................................................................................272.000.00-2.00-----------------------------------------------------------------------------
.......................................................................................................................TTATTTTCATTTTATTTATTTACG...........................................................................................................242.000.00--1.001.00---------------------------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTTTTTG.....................................................................................................282.000.002.00------------------------------------------------------------------------------
...............................................................................................................................ATTTTATTTATTTATTTTCCAG.....................................................................................................222.000.00--1.001.00---------------------------------------------------------------------------
...........................................................................................................................TTTCATTTTATTTATTTATTTTTCAAG....................................................................................................272.000.00--2.00----------------------------------------------------------------------------
..........................................................................................................................TTTTCATTTTATTTATTTGAAC..........................................................................................................221.000.00-------------1.00-----------------------------------------------------------------
............................................................................................................................TTCATTTTATTTATTTATTTCTG.......................................................................................................231.000.00---1.00---------------------------------------------------------------------------
........................................................................................................................................................TCTCTGTCGCCCAGGCTGGGGCG...........................................................................231.000.00-1.00-----------------------------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTATTG......................................................................................................271.000.001.00------------------------------------------------------------------------------
..............................................................................................................................CATTTTATTTATTTATTTTTTCG.....................................................................................................231.000.00--1.00----------------------------------------------------------------------------
........................................TCACACAACAGTAAGTACTTA.............................................................................................................................................................................................211.000.00--------------1.00----------------------------------------------------------------
.............................................................................................................................TCATTTTATTTATTTATTTTCTG......................................................................................................231.000.00---1.00---------------------------------------------------------------------------
................................................................................................................................................................................AGTGGCATGATCTCGGCTCCCC....................................................221.000.00------------------------------------------------------------------1.00------------
.......................................................................................................................................................................CTGGAGTGCAGTGGCATGATCTCGGCTCCCCG...................................................321.000.001.00------------------------------------------------------------------------------
..............................................................................................................................................................TCGCCCAGGCTGGAGTGCAGTGGCATCACG..............................................................301.000.00---1.00---------------------------------------------------------------------------
............................................................................................................................................................................................................................ACGCCATTCTCCTGCCTCAGCCTTTGCG..281.000.001.00------------------------------------------------------------------------------
...........................................................................................................................TTTCATTTTATTTATTTATTTTTAATA....................................................................................................271.000.00--1.00----------------------------------------------------------------------------
.........................................................ATTTACTTTTATATTGTCT..............................................................................................................................................................................191.000.00-------------1.00-----------------------------------------------------------------
..........................................................................................................................TTTTCATTTTATTTATTTATTTTTGAGG....................................................................................................2811.001.00-------------------1.00-----------------------------------------------------------
.......................................................TAATTTACTTTTATAACG.................................................................................................................................................................................181.000.00---------------------1.00---------------------------------------------------------
.............................................................................................................................TCATTTTATTTATTTATTTTTTTCT....................................................................................................251.000.00------1.00------------------------------------------------------------------------
.........................................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCT...........221.000.00-----1.00-------------------------------------------------------------------------
...................................................................................................................................................................................................ACTGCAAGCTCTGCCTCCCATGCC...............................241.000.00-1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................CATGATCTCGGCTCACTGCAAGCGCTG..........................................271.000.00---------------------------1.00---------------------------------------------------
.................................................................................................................................................................................GTGGCATGATCTCGGCTCACTGCGGA...............................................261.000.00---------------------------------1.00---------------------------------------------
......................................................................................................................................................AGTCTCTGTCGCCCAGCTGG................................................................................201.000.00-------------------1.00-----------------------------------------------------------
...............................................................................................................................................................................CAGTGGCATGATCTCGGCTCC......................................................211.000.00---------------------------------------------------------------1.00---------------
........................................................................................................................TATTTTCATTTTATTTATTTATTTATTG......................................................................................................281.000.00--1.00----------------------------------------------------------------------------
................................................................................................................................................................................................................CCTCCCAGGTTCACGCCATTCTCCCCA...............271.000.00---------------------------1.00---------------------------------------------------
..........................................................................................................................................................................................TCTCGGCTCACTGCAAGCTAAA..........................................221.000.00----------------------------------------------------------1.00--------------------
.................................................................................................................................................................................GTGGCATGATCTCGGCTCCGTT...................................................221.000.00-----------------------1.00-------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTTTTTTG....................................................................................................291.000.00--1.00----------------------------------------------------------------------------
...........................................................................................................CTAAAAATCTCTTTATTTTCATTTTATTTTTG...............................................................................................................321.000.00------1.00------------------------------------------------------------------------
..............................................................................................................................CATTTTATTTATTTATTTTCA.......................................................................................................211.000.00--1.00----------------------------------------------------------------------------
.....................................................................................................................................................GAGTCTCTGTCGCCCAGGCTGAG..............................................................................231.000.001.00------------------------------------------------------------------------------
....................................................................................................................................................................AGGCTGGAGTGCAGTGGCATGCGGC.............................................................251.000.001.00------------------------------------------------------------------------------
............................................................................................................................TTCATTTTATTTATTTATTTCTA.......................................................................................................231.000.00-1.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................ATCTCGGCTCACTGCAAGCTCTGCCTCCACG..................................311.000.001.00------------------------------------------------------------------------------
............................................................................................................................................................................GTGCAGTGGCATGATCTCGGCTCAGTGA..................................................281.000.00----------------------------------------------------------------------------1.00--
.................................................................................................................................................................................GTGGCATGATCTCGGCTCCGCA...................................................221.000.00-----------------------1.00-------------------------------------------------------
...................................................................................................................CTCTTTATTTTCATTTTATCG..................................................................................................................211.000.00---1.00---------------------------------------------------------------------------
..............................................................................................................................CATTTTATTTATTTATCTAC........................................................................................................201.000.00--1.00----------------------------------------------------------------------------
........................................................................................................................TATTTTCATTTTATTTATTTAG............................................................................................................221.000.00---1.00---------------------------------------------------------------------------
................................................................................................................AATCTCTTTATTTTCATTTTATTTATTTATTTTTG.......................................................................................................3511.001.00--1.00----------------------------------------------------------------------------
.................................................................................................................ATCTCTTTATTTTCATTTTATTTATTTATTTTTG.......................................................................................................3411.001.00----1.00--------------------------------------------------------------------------
.AATTAATGAATGACGATACCCTGGTG...............................................................................................................................................................................................................................2611.001.00-----------------------------------------------------------------------------1.00-
...........................................................................................................................TTTCATTTTATTTATTTATTTTTAATG....................................................................................................271.000.00--1.00----------------------------------------------------------------------------
...............................................................................................................................ATTTTATTTATTTATTTTTGATCTG..................................................................................................251.000.001.00------------------------------------------------------------------------------
.......................................................................................................................TTATTTTCATTTTATTTATTTATTTTTGAGG....................................................................................................3111.001.001.00------------------------------------------------------------------------------
..............................................................................................ACATTTTAATTTTCTAAAAATC......................................................................................................................................2211.001.00--1.00----------------------------------------------------------------------------
....................................................................................................................TCTTTATTTTCATTTTATTTATTTATTTTTG.......................................................................................................3111.001.00----1.00--------------------------------------------------------------------------
...........................................................................................................................TTTCATTTTATTTATTTATTTTTTAGC....................................................................................................271.000.001.00------------------------------------------------------------------------------
............................................................................................................................................................................................TCGGCTCACTGCAAGCTCTGCCTCCCAGGGCC..............................321.000.00-1.00-----------------------------------------------------------------------------
.....................................................................................................................CTTTATTTTCATTTTATTTATTTATTTTTG.......................................................................................................3011.001.00----1.00--------------------------------------------------------------------------
...................................................................................................................................TATTTATTTATTTTTGAGGAGTCCC..............................................................................................251.000.00-1.00-----------------------------------------------------------------------------
.............................................................................................................................TCATTTTATTTATTTATTTCTTG......................................................................................................231.000.00--1.00----------------------------------------------------------------------------
................................................................................................................AATCTCTTTATTTTCATTTTATTTATTT..............................................................................................................2811.001.001.00------------------------------------------------------------------------------
....................................................................................................................................................................AGGCTGGAGTGCAGTGGCATGCCCC.............................................................251.000.001.00------------------------------------------------------------------------------
.............................................................................................................................................................................................CGGCTCACTGCAAGCTCGGC.........................................201.000.00-------------------------1.00-----------------------------------------------------
................................................................................................................AATCTCTTTATTTTCTTTA.......................................................................................................................191.000.00-----------1.00-------------------------------------------------------------------
.............................................................................................................................TCATTTTATTTATTTATTTCTA.......................................................................................................221.000.00------1.00------------------------------------------------------------------------
.............................................................................................................................TCATTTTATTTATTTATTTTTCAAG....................................................................................................251.000.00--1.00----------------------------------------------------------------------------
........................................................................................................................................................................................GATCTCGGCTCACTGCAAGCTAAGT.........................................251.000.00------------------------------------------------------------1.00------------------
...........................................................................................................................TTTCATTTTATTTATTTATTCTTG.......................................................................................................241.000.00--1.00----------------------------------------------------------------------------
...................................................................................................................................................................................GGCATGATCTCGGCTCAGAA...................................................201.000.00-------------------------------------------------------------1.00-----------------
...................CCCTGGTGAATGTGTTATACGTC................................................................................................................................................................................................................2311.001.00----------------------------------------------------1.00--------------------------
........................................................................................................TTTCTAAAAATCTCTTTATTTTCA..........................................................................................................................2411.001.00---1.00---------------------------------------------------------------------------
........................................................................................................................................................TCTCTGTCGCCCAGGCTGGAGTGCAGTCATG...................................................................311.000.001.00------------------------------------------------------------------------------
.................................................................................................................................TTTATTTATTTATTTTTGAGGAGCC................................................................................................251.000.001.00------------------------------------------------------------------------------
.............................................................................................................................TCATTTTATTTATTTATTTTTGTG.....................................................................................................241.000.00----1.00--------------------------------------------------------------------------
..............................................................................................................................CATTTTATTTATTTATTTTCAT......................................................................................................221.000.00---1.00---------------------------------------------------------------------------
.....AATGAATGACGATACCCTGGTGAAC............................................................................................................................................................................................................................251.000.00-1.00-----------------------------------------------------------------------------
................ATACCCTGGTGAATGTGTTATACGTC................................................................................................................................................................................................................2611.001.00--------------------------------------------------1.00----------------------------
......................................................................................................................TTTATTTTCATTTTATTGCTG...............................................................................................................211.000.00--------------1.00----------------------------------------------------------------
......................................................................................................................................................AGTCTCTGTCGCCCAGGCTGGAGCGT..........................................................................261.000.001.00------------------------------------------------------------------------------
...........................................................................................................................TTTCATTTTATTTATTTATTTTCT.......................................................................................................241.000.00---1.00---------------------------------------------------------------------------
......................................................................................................................................................AGTCTCTGTCGCCCAGGCTGGAGGGG..........................................................................261.000.00-1.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCTAA.........241.000.00---------------------------------------------------------1.00---------------------
..........................................................................................................................TTTTCATTTTATTTATTTATTTTTTTCG....................................................................................................281.000.00--1.00----------------------------------------------------------------------------
.........................................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTAAA..........231.000.00---------------------------------------------1.00---------------------------------
......................................................................................................................TTTATTTTCATTTTATTTATTTATTA..........................................................................................................261.000.00----1.00--------------------------------------------------------------------------
.................................................................................................................................................................................GTGGCATGATCTCGGCTCAGAA...................................................221.000.00-----------------------------------------------------------1.00-------------------
................................................................................................................................................................................AGTGGCATGATCTCGGCTCAGAA...................................................231.000.00----------------------------------------1.00--------------------------------------
.................TACCCTGGTGAATGTGTTATACGTCACACAACA........................................................................................................................................................................................................3311.001.00-------------------------------------1.00-----------------------------------------
..................................................................................................................................................................................TGGCATGATCTCGGCTCACTGCAAGC..............................................2601.001.00----------1.00--------------------------------------------------------------------
......................................................................................................................TTTATTTTCATTTTATTTATTTATTTTTTAA.....................................................................................................311.000.00---1.00---------------------------------------------------------------------------
........................................................................................................................................................TCTCTGTCGCCCAGGCTGGAACGC..........................................................................241.000.001.00------------------------------------------------------------------------------
..................................................................................................................................................................................TGGCATGATCTCGGCTCACTTCGG................................................241.000.00------------------------------------------1.00------------------------------------
..........................................................................................................................TTTTCATTTTATTTATTTATTTAG........................................................................................................241.000.001.00------------------------------------------------------------------------------
..............................................................................................................................................................TCGCCCAGGCTGGAGTGCAGTGGCATGTGCG.............................................................311.000.001.00------------------------------------------------------------------------------
.................................................................................................................................................................................GTGGCATGATCTCGGCTCCCCG...................................................221.000.00---------------1.00---------------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTTTA.......................................................................................................261.000.001.00------------------------------------------------------------------------------
...........................................................................................................................TTTCATTTTATTTATTTATTTTTTTTC....................................................................................................271.000.00------1.00------------------------------------------------------------------------
........................................................................................................................................................TCTCTGTCGCCCAGGCTGGAGTGCAGGCA.....................................................................291.000.001.00------------------------------------------------------------------------------
......................................................................................................................................................................GCTGGAGTGCAGTGGCATGATCTCGGAA........................................................281.000.00----------1.00--------------------------------------------------------------------
...............................................................................................................................................................................CAGTGGCATGATCTCGGCTCACGAG..................................................251.000.00--------------------1.00----------------------------------------------------------
..........................................................................................................................TTTTCATTTTATTTATTTAATTG.........................................................................................................231.000.00----1.00--------------------------------------------------------------------------
.............................................................................................................................TCATTTTATTTATTTATTTTTCG......................................................................................................231.000.00--1.00----------------------------------------------------------------------------
.......................................................................................................................TTATTTTCATTTTATTTATTTATTTTTG.......................................................................................................2830.330.33---0.33---------------------------------------------------------------------------
......................................................................................................................TTTATTTTCATTTTATTTATTTATTTTTG.......................................................................................................2930.330.33----0.33--------------------------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTTTG.......................................................................................................2640.250.25------0.25------------------------------------------------------------------------
..........................................................................................................................TTTTCATTTTATTTATTTATTTTTG.......................................................................................................2560.170.17----0.17--------------------------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTTCTTG.....................................................................................................2870.140.14-------------0.14-----------------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTTATG......................................................................................................2770.140.14----0.14--------------------------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTT.........................................................................................................2470.140.140.14------------------------------------------------------------------------------
.........................................................................................................................ATTTTCATTTTATTTATTTATTTTATT......................................................................................................2770.140.140.14------------------------------------------------------------------------------
...........................................................................................................................TTTCATTTTATTTATTTATTTTTGAG.....................................................................................................2690.110.11------------------------------------------------------------------------------0.11

Antisense strand
AAATTAATGAATGACGATACCCTGGTGAATGTGTTATACGTCACACAACAGTAAGTAATTTACTTTTATATTTTATGGAATGATTATATAGTTTACATTTTAATTTTCTAAAAATCTCTTTATTTTCATTTTATTTATTTATTTTTGAGGAGTCTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCGAGT
...................................................................................................................(((((((.......................)))))))..((((((.....))).)))..............................................................................
..................................................................................................................115......................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM956925PAZD5SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR038854(GSM458537)
MM653. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038857(GSM458540)
D20. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189787
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACTG.......................... 2313.000.00---------4.00------3.00---------------------1.00-------1.00--------------------1.00-1.00---1.001.00----
..............................................................................................................................................................................................................TGCCTCCCAGGTTCACGCCATTTC.................... 247.000.00-------7.00-----------------------------------------------------------------------
....................................................................................................................................................................................................................................CTCCTGCCTCAGCCTTCCGTT. 214.000.00------------4.00------------------------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTGTAG........................... 223.000.00-3.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTCTGCCTCCCAGGTTCACGG.......................... 222.000.00-2.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................GCAAGCTCTGCCTCCCAGGTTCACAG.......................... 262.000.00-2.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTCTG............................. 202.000.00---------1.00---------------------------------------1.00-----------------------------
..........................................................................................................................................................................................................AGGAGAATGGCGTGAACCTGGGAGGCAGAGC................. 3102.002.00-----2.00-------------------------------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCACTC..................... 282.000.001.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................GGCTCACTGCAAGCTCTGCCTCCCAGGTTCG............................. 312.000.002.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTTCCGAGGTGA 261.000.00------------------------------------1.00------------------------------------------
...................................................................................................................................................................................................................................CTCGGAAGGCTGAGGCAGGAGA. 2201.001.00-----------------1.00-------------------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTCAA............................. 201.000.00---------------1.00---------------------------------------------------------------
..................................................................................................................................................................................................CACTGCAAGCTCTGCCTCCCAGGTTCT............................. 271.000.00-------------------1.00-----------------------------------------------------------
......................................................................................................................................................................................................................AGGTTCACGCCATTCTCCTGTA.............. 221.000.00-------------------------------1.00-----------------------------------------------
..........................................................................................................................................................................GAGTGCAGTGGCATGATCTCGA.......................................................... 221.000.00-----------------------------------------------------1.00-------------------------
.....................................................................................................................................................................................CTTGCAGTGAGCCGAGATCATG............................................... 2201.001.00-----------------------------------------------------------------1.00-------------
..............................................................................................................................................................................................................TGCCTCCCAGGTTCACGCCATTTT.................... 241.000.00---------------------1.00---------------------------------------------------------
...............................................................................................................................................................................................................................CCATTCTCCTGCCTCAGCCTTCCGAGGC 281.000.00-1.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCAGC...................... 271.000.001.00------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TTCTCCTGCCTCAGCCTTCCGTA. 231.000.00---------------------------------1.00---------------------------------------------
.........................................................................................................................................................................................................................................GCCTCAGCCTTCCGAGTGGGC 211.000.00----------------------------1.00--------------------------------------------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTTCGGAA. 221.000.00-----------------------------------1.00-------------------------------------------
...............................................................................................................................................................................................................................CCATTCTCCTGCCTCAGCCTTCCGATGC 281.000.00-1.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................TGGCGTGAACCTGGGAGGCAGAGCTTGC........................ 2801.001.00------------------------1.00------------------------------------------------------
.......................................................................................................................................................GTCTCTGTCGCCCAGGCTGGAGTGCAGATA..................................................................... 301.000.00---------------------------------------------------------------------------1.00---
.......................................................................................................................................................CTGGGCGACAGAGAC.................................................................................... 1501.001.00--------------------------------------------------------1.00----------------------
..........................................................................................................................................................................................................GCTCTGCCTCCCAGGTTCACGCCATCCGC................... 291.000.001.00------------------------------------------------------------------------------
........................................................................................................................................................................................................AAGCTCTGCCTCCCAGGTTCACGCCACCT..................... 291.000.00-1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................................CTCCTGCCTCAGCCTTCCGATT 221.000.00----------------------------------------------------------------------1.00--------
....................................................................................................................................................................................................................CCAGGTTCACGCCATTCTTTTT................ 221.000.00-----------------------------------------1.00-------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCAATAC......................... 241.000.00-1.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................GTGAACCTGGGAGGCAGAGCTTGCAGTGAGCC............................ 3201.001.00-----1.00-------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TCCTGCCTCAGCCTTCCGATTC 221.000.00----------------------------------------------------------------1.00--------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTTCCCCA. 221.000.00------------------------------1.00------------------------------------------------
...................................................................................................................................................................................................................................TCGGAAGGCTGAGGCAGGAGA.. 2101.001.00--------------------------------------------------------------------1.00----------
....................................................................................................................................................................................................CTGCAAGCTCTGCCTCCCAGGTTCAAGCC......................... 291.000.001.00------------------------------------------------------------------------------
.................................................................................................................................................................................................................................ATTCTCCTGCCTCAGCCTTCCGAAAAT 271.000.00--------------1.00----------------------------------------------------------------
....................................................................................................................................................................................................................................CTCGGAAGGCTGAGGCAGGAG. 2101.001.00-----1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................TCTGCCTCCCAGGTTCACGCCATCTTG................... 271.000.001.00------------------------------------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTACGG........................... 221.000.00-1.00-----------------------------------------------------------------------------
..................................................................................................................................................................................................................................CTCGGAAGGCTGAGGCAGGAGAA. 2301.001.00-------------------------------------------------------1.00-----------------------
.......................................................................................................................................................................................................GTGAACCTGGGAGGCAGAGCTTG............................ 2301.001.00-----1.00-------------------------------------------------------------------------
......................................................................................................................................................................................................CGTGAACCTGGGAGGCAGAGCTTGC........................... 2501.001.00-----1.00-------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTCTGCCTCCCAGGTTCCC............................ 201.000.001.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTTCCGACCCC 251.000.001.00------------------------------------------------------------------------------
..................................................................................................................................................................................................TGGCGTGAACCTGGGAGGCAGAGCTTGCAGTG........................ 3201.001.00------------------------1.00------------------------------------------------------
.................................................................................................................................................................................................................................ATTCTCCTGCCTCAGCCTTCCGAAA 251.000.00--------------------------------------------1.00----------------------------------
.......................................................................................................................................................................................................CAAGCTCTGCCTCCCAGGTTCAGAA.......................... 251.000.00----------------------------------1.00--------------------------------------------
........................................................................................................................................................................................................................GTTCACGCCATTCTCCTGCCTCAGCCAAA..... 291.000.00-------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................................................................ATTCTCCTGCCTCAGCCTTCCAAG. 241.000.00------------------------------------------------------1.00------------------------
..............................................................................................................................................................................................................TGCCTCCCAGGTTCACGCCATTTTAA.................. 261.000.00-----------------------------------------------------------------------1.00-------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCCTG........................... 221.000.00---------1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................CTCCCAGGTTCACGCCATTCTCCTCAA.............. 271.000.00-----------------------------------------------1.00-------------------------------
........................................................................................................................................................................................................................................ACTCGGAAGGCTGAGGCA 1801.001.00----------1.00--------------------------------------------------------------------
....................................................................................................................................................................................................................CCAGGTTCACGCCATTCTTTT................. 211.000.00----------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................................................TGCCTCAGCCTTCCGAGTTTT 211.000.00---------------1.00---------------------------------------------------------------
...........................................................................................................................................................................................................................CACGCCATTCTCCTGTAG............. 181.000.00----------------------------1.00--------------------------------------------------
....................................................................................................................................................GGAGTCTCTGTCGCCCAGGCTCCC.............................................................................. 241.000.001.00------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTCTGCCTCCCAGGTTCACGCCATTCTCAA................. 311.000.00------------------------------------------------------------------------1.00------
..........................................................................................................................................................................................................................TCACGCCATTCTCCTGCCTCAGCCCCAA.... 281.000.00--------------------------------------------------------------1.00----------------
.......................................................................................................................................................TCCAGCCTGGGCGACAGAGAC.............................................................................. 2101.001.00-----------------1.00-------------------------------------------------------------
...........................................................................................................................................................................................................TGGCGTGAACCTGGGAGGCAGAG........................ 2301.001.00-----1.00-------------------------------------------------------------------------
..............................................................................................................................................................................................................TGCCTCCCAGGTTCACAGAA........................ 201.000.00------------------------------1.00------------------------------------------------
............................................................................................................................................................................................................GGAGAATGGCGTGAACCTGGGAGGCAGA.................. 2801.001.00----------1.00--------------------------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCATGGAG................... 301.000.00-1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................GGCATGATCTCGGCTCACTGCAAGCTCGC.......................................... 291.000.001.00------------------------------------------------------------------------------
......................................................................................................................................................................................................................AGGTTCACGCCATTCTCCTCAA.............. 221.000.00--------------------------------1.00----------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCATTGCAG.................. 311.000.001.00------------------------------------------------------------------------------
..........................................................................................................................................................................................................TGGCGTGAACCTGGGAGGCAGAGC........................ 2401.001.00-----1.00-------------------------------------------------------------------------
....................................................................................................................................................................................................CTGCAAGCTCTGCCTCCCAGGTTGAG............................ 261.000.001.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTTCCGCAA 231.000.00--------------------------------1.00----------------------------------------------
...............................TGTTATACGTCACACATAT........................................................................................................................................................................................................ 191.000.00----------------------1.00--------------------------------------------------------
..................................................................................................................................................................................................................................TTCTCCTGCCTCAGCCTTCCGAGGAC 261.000.00---------------------------------------1.00---------------------------------------
................................................................................................................................................................................................................................CATTCTCCTGCCTCAGCCTTCCGAAAT 271.000.00-----------------------------1.00-------------------------------------------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTTCCGCCC 231.000.00----------------------------------1.00--------------------------------------------
....................................................................................................................................................GGAGTCTCTGTCGCCCAGGCTGGAGTGCAATCC..................................................................... 331.000.00-1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................CCAGGTTCACGCCATTCTCCTGTAT............. 251.000.00--------------------1.00----------------------------------------------------------
.................................................................................................................................................................................................................................TCGGAAGGCTGAGGCAGGAGAAT.. 2301.001.00-----------------1.00-------------------------------------------------------------
.............................................................................................................................................................................................................CGTGAACCTGGGAGGCAG........................... 1801.001.00----------1.00--------------------------------------------------------------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTTCCGGGAG 241.000.00-----------------------------1.00-------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCAGCAG.................... 291.000.001.00------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCCTCCCAGGTTCACGCCATTGT.................... 231.000.00------------------------------------------------1.00------------------------------
.................................................................................................................................................................................................GTGAACCTGGGAGGCAGAGCTTGCAGTGA............................ 2901.001.00-------------------------1.00-----------------------------------------------------
................................................................................................................................................................................................................CCTCCCAGGTTCACGCCATTGAGG.................. 241.000.00-------------------------------1.00-----------------------------------------------
.......................................................................................................................................................AGCCTGGGCGACAGAGAC................................................................................. 1801.001.00-----1.00-------------------------------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCATGCAG................... 301.000.001.00------------------------------------------------------------------------------
.............................................................................................................................................................................................................CTGCCTCCCAGGTTCACTGCA........................ 211.000.00---------------------------------------------------1.00---------------------------
..................................................................................................................................................................................................................................TTCTCCTGCCTCAGCCTTCCGAGGA 251.000.00--------------------1.00----------------------------------------------------------
.........................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCAACAG......................... 241.000.001.00------------------------------------------------------------------------------