ID: uc002toj.1_intron_7_0_chr2_128081818_r.5p
GENE: (8)
chr2:128083104-128083353-


(4)
BRAIN 		(3)
BREAST 		(11)
CELL-LINE 		(2)
CERVIX 		(1)
LIVER 		(1)
OTHER 		(4)
SKIN 		(1)
XRN.ip

Sense strand
GAAAATTCTGGCTCAGGAAGTTGTCCATCACTTGATAGTCCTTTGGATGGGTAATGTTTATCGTAGTTTTTGGAGGGTTTATTTGTTTATTTGAGACAGAGTTTTGCTGTCACCCAGGCTGGAGCGCAGTGGCGTGAATGCGGCTTACTGCAGCCTTGACCTCCTTGGCTCCATCAGTCCTCCCACCTCTGACCCCCGAGGAACTAGGACCAAAGGCATTTGCTATTAATACCACATCTGGCTATTTTGT
........................................................................((.(((...(((((((.....))))))).....))).))..((.....)).((((....))))...................................................................................................................
....................................................................69..................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189786SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189787SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925PAZD5SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................TCACCCAGGCTGGAGCGCAGCGAC.....................................................................................................................2412.000.008.004.00---------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGCTCAG.................................................................................................................308.000.007.001.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGTGCG...................................................................................................................2607.001.003.004.00---------------------------
.........................................................................AGGGTTTATTTGTTTGCC...............................................................................................................................................................186.000.006.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCCGG..................................................................................................................256.000.006.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTCGCG....................................................................................................................255.000.003.002.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGCCG.................................................................................................................265.000.005.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGTGC....................................................................................................................2505.001.003.002.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGTCG....................................................................................................................235.000.001.004.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCCCC..................................................................................................................275.000.005.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGGACG..................................................................................................................255.000.004.001.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGTCG....................................................................................................................2504.001.004.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGAGTG..................................................................................................................254.000.004.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCGTGGCC...............................................................................................................304.000.004.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCTCAG.................................................................................................................264.000.003.001.00---------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCGTGCTCG..............................................................................................................253.000.003.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGATG......................................................................................................................233.000.001.001.00---1.00-----------------------
............................CACTTGATAGTCCTTTGGATG.........................................................................................................................................................................................................2113.003.00---3.00-------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGCGAC.....................................................................................................................263.000.003.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCCGG..................................................................................................................273.000.003.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGCCTC...................................................................................................................2603.001.002.001.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCTCCC.................................................................................................................283.000.00-3.00---------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGGATG..................................................................................................................293.000.002.001.00---------------------------
.....................................................................................................TTTTGCTGTCACCCAGGCTGGAGAGC...........................................................................................................................262.000.002.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTCGC.....................................................................................................................242.000.002.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGCCCGG.................................................................................................................302.000.002.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCTCCT.................................................................................................................282.000.001.001.00---------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCTCGG.................................................................................................................222.000.002.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGAGA......................................................................................................................252.000.002.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGTGACCTC.............................................................................................................302.000.002.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCGCTC.................................................................................................................282.000.001.001.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGAATG..................................................................................................................252.000.001.001.00---------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGCA.....................................................................................................................262.000.002.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTCGC.....................................................................................................................262.000.001.001.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCCCC..................................................................................................................252.000.002.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGGGAG..................................................................................................................252.000.002.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGCCGG..................................................................................................................292.000.002.00----------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCTGTG.................................................................................................................222.000.001.001.00---------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCCACG.......................................................................................................................242.000.00-2.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCTGTG.................................................................................................................262.000.002.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGAGCT..................................................................................................................252.000.00-2.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCACCGG......................................................................................................................232.000.00-2.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGTGG....................................................................................................................2502.001.00-2.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCCGC.....................................................................................................................242.000.00-2.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGCCC.................................................................................................................262.000.002.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGCGAA.....................................................................................................................222.000.00-1.001.00--------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCTCGG.................................................................................................................282.000.00-2.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGCCGT................................................................................................................272.000.00-2.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGTCGC...................................................................................................................2602.001.002.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGTGCG...................................................................................................................282.000.001.001.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCTTT..................................................................................................................272.000.00-2.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCGGG.....................................................................................................................242.000.001.001.00---------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCTGAG.......................................................................................................................241.000.00-1.00---------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCGTGAA................................................................................................................2311.001.00-1.00---------------------------
........................................................................................................TGCTGTCACCCAGGCTGGAGCGCAGTGGCG....................................................................................................................3021.001.000.500.50---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCCGGA.................................................................................................................261.000.00-1.00---------------------------
...................................TAGTCCTTTGGATGGAGAG....................................................................................................................................................................................................191.000.00----------1.00------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGGGG...................................................................................................................241.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGTTTT...................................................................................................................2601.001.00--------------------1.00--------
..................................................................................................................CAGGCTGGAGCGCAGTGGAGC...................................................................................................................211.000.00---------1.00-------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGAGCC..................................................................................................................271.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCCCAC.................................................................................................................261.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGCAGG.....................................................................................................................221.000.00-1.00---------------------------
..........................................................................................................CTGTCACCCAGGCTGGAGCGCAGTGGC.....................................................................................................................2701.001.00-------------------------1.00---
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCTAAC.................................................................................................................261.000.00--1.00--------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCGATCC................................................................................................................291.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGAGCT..................................................................................................................271.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGAGGG..................................................................................................................271.000.001.00----------------------------
.................AAGTTGTCCATCACTTGATAGTCCTTTGGA...........................................................................................................................................................................................................3011.001.00--------------1.00--------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGCTC.................................................................................................................261.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGAC....................................................................................................................251.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCACGGC......................................................................................................................231.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGATGC.....................................................................................................................241.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCGCGCG................................................................................................................291.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTTGCA....................................................................................................................251.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCTCT..................................................................................................................271.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCCCAG.................................................................................................................281.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCTAAT.................................................................................................................261.000.00--1.00--------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGGCGC..................................................................................................................251.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGTGC....................................................................................................................271.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGCACC.....................................................................................................................261.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTTGCT....................................................................................................................251.000.00-1.00---------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCGTGGCCT..............................................................................................................251.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGAGCC..................................................................................................................251.000.00-1.00---------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCACTC.......................................................................................................................241.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGAGCC.....................................................................................................................241.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCACG........................................................................................................................231.000.001.00----------------------------
................................................................................................................CCCAGGCTGGAGCGCAGTGGCCCAG.................................................................................................................251.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGCGGGGG................................................................................................................311.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGCGGG.....................................................................................................................261.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGTGCC...................................................................................................................241.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCACCG.......................................................................................................................221.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCCCAC.................................................................................................................281.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCATTCG......................................................................................................................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGGAAG..................................................................................................................271.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGTGTG................................................................................................................271.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGAACG..................................................................................................................291.000.00-1.00---------------------------
................................................................................................................................................................................................................................ATTAATACCACATCTTT.........171.000.00-----------------------1.00-----
.AAAATTCTGGCTCAGGAAGTTGTCCATCACT..........................................................................................................................................................................................................................3111.001.00---------------1.00-------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGTCGC...................................................................................................................241.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCCGG.....................................................................................................................241.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCCCT..................................................................................................................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCGTG.....................................................................................................................241.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCTGCG.................................................................................................................261.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCGCG.....................................................................................................................241.000.001.00----------------------------
.....................................................................................................TTTTGCTGTCACCCAGGCTGGTGTG............................................................................................................................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCGAG.....................................................................................................................241.000.00-1.00---------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGAGTG..................................................................................................................291.000.001.00----------------------------
................................................................................................................CCCAGGCTGGAGCGCAGTGGCGACC.................................................................................................................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGATG...................................................................................................................261.000.001.00----------------------------
........................................................................................................TGCTGTCACCCAGGCTGGAGCGCAGTGGCGTGG.................................................................................................................331.000.001.00----------------------------
................................................................................................................CCCAGGCTGGAGCGCAGTGGCGTGGGG...............................................................................................................271.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCTCAG.................................................................................................................281.000.00-1.00---------------------------
................................................................................................CAGAGTTTTGCTGTCTGGT.......................................................................................................................................191.000.00----------------------1.00------
................................................................................................................CCCAGGCTGGAGCGCAGTGGCTTTT.................................................................................................................251.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCGGGG.................................................................................................................281.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTCGGC....................................................................................................................231.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCACCGG......................................................................................................................251.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGCGTT..................................................................................................................291.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCACGGG......................................................................................................................231.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTG.......................................................................................................................2201.001.00--------1.00--------------------
........................................................................................................................GGAGCGCAGTGGCGTGCAC...............................................................................................................191.000.00-------1.00---------------------
.............................................................................................................TCACCCAGGCTGGAGCGCATTGC......................................................................................................................231.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCTCGG.................................................................................................................261.000.001.00----------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCGTGGCT...............................................................................................................241.000.00------------------------1.00----
.....................................................ATGTTTATCGTAGTTTTTGGAGGGCT...........................................................................................................................................................................261.000.001.00----------------------------
........................................................................................ATTTGAGACAGAGTTTTGCTGTCGTC........................................................................................................................................261.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGGCAG........................................................................................................................211.000.001.00----------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCGTGCCC...............................................................................................................241.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCTCGC.................................................................................................................281.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCCTT..................................................................................................................271.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGCACA...................................................................................................................2601.001.001.00----------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCGAGC.................................................................................................................221.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGGACT..................................................................................................................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGTCCC...................................................................................................................2601.001.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCGAC..................................................................................................................271.000.00-1.00---------------------------
..........................................................................................................CTGTCACCCAGGCTGGAGCGCAACGG......................................................................................................................261.000.001.00----------------------------
..........................................................................................................CTGTCACCCAGGCTGGAGCGCAGTGCACC...................................................................................................................291.000.001.00----------------------------
........................................................................................ATTTGAGACAGAGTTTTGCTCTAG..........................................................................................................................................241.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCGCCC.................................................................................................................281.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGCGTC................................................................................................................271.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGTAAG...................................................................................................................2601.001.00--1.00--------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGTAGC...................................................................................................................241.000.00--------------------------1.00--
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGCGTCACC...............................................................................................................321.000.00-1.00---------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCGTGAACTCG............................................................................................................2711.001.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCTGTG.................................................................................................................281.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGCGCGAG................................................................................................................311.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGAGAC..................................................................................................................251.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGCTGTG.................................................................................................................301.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGGGCT..................................................................................................................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGAGAC.....................................................................................................................241.000.00-1.00---------------------------
..............................................................................................................CACCCAGGCTGGAGCGCAGTGTAA....................................................................................................................241.000.00-------------------1.00---------
...........................................................................................................................................................................................TCTGACCCCCGAGGAACTAGGAC........................................2311.001.00----1.00------------------------
.......................................................................................................................TGGAGCGCAGTGGCGTGAGCTC.............................................................................................................221.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCCG......................................................................................................................231.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCCCCG.................................................................................................................261.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCCGTG.................................................................................................................281.000.00-1.00---------------------------
.......................................................................................................TTGCTGTCACCCAGGCTGGGGCG............................................................................................................................231.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGGAA...................................................................................................................261.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGAGAG.....................................................................................................................241.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCCCT..................................................................................................................271.000.001.00----------------------------
..................................................................................................................CAGGCTGGAGCGCAGTGGCGTG..................................................................................................................2201.001.00-------------1.00---------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGTTT....................................................................................................................231.000.00-----1.00-----------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGAGGG..................................................................................................................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTCT......................................................................................................................231.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGATG......................................................................................................................211.000.00-1.00---------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGCTTT..................................................................................................................291.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTTAC.....................................................................................................................241.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGCACG................................................................................................................271.000.001.00----------------------------
..............................................................................................................CACCCAGGCTGGAGCGCAGTGTA.....................................................................................................................231.000.00----------------1.00------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGTGACGCG.............................................................................................................301.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGAATG..................................................................................................................271.000.00-1.00---------------------------
......................................................................................................................................................................................................AGGAACTAGGACCAAAGGCATTCGC...........................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCGCCG.................................................................................................................281.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGCGAC.....................................................................................................................221.000.00-1.00---------------------------
...............................................................TAGTTTTTGGAGGGTTTATTTGTTTATTTG.............................................................................................................................................................3011.001.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCCTGG.................................................................................................................281.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCACTAG......................................................................................................................231.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGGACG..................................................................................................................271.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCCAC..................................................................................................................251.000.001.00----------------------------
....................................................................................................................................................................................................CGAGGAACTAGGACCAAAGGC.................................2111.001.00----1.00------------------------
..............................................................................................................CACCCAGGCTGGAGCGCAGTCCCG....................................................................................................................241.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGGGGG..................................................................................................................271.000.001.00----------------------------
.........................................................................AGGGTTTATTTGTTTGCCT..............................................................................................................................................................191.000.001.00----------------------------
...........................................................................................................TGTCACCCAGGCTGGAGCGCAGTGGGACG..................................................................................................................291.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGGCA...................................................................................................................261.000.001.00----------------------------
...........CTCAGGAAGTTGTCCATCACTTGACA.....................................................................................................................................................................................................................261.000.00--1.00--------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGTGTGCG..............................................................................................................291.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCGGA.....................................................................................................................241.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCGAT.....................................................................................................................241.000.001.00----------------------------
...................................................................................................................AGGCTGGAGCGCAGTGGCTCCG.................................................................................................................221.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGAGA......................................................................................................................231.000.00------------------1.00----------
............................................................................................................GTCACCCAGGCTGGAGCGCAGTGTGCG...................................................................................................................271.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGCGGG.....................................................................................................................221.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCATC.....................................................................................................................241.000.00-1.00---------------------------
.................................................................................................AGAGTTTTGCTGTCACCCAGGCTGGAA..............................................................................................................................271.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGCCTC...................................................................................................................241.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCTGGG.................................................................................................................261.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGCTGGG.................................................................................................................281.000.001.00----------------------------
..................................................................................................................CAGGCTGGAGCGCAGTGGCTCCG.................................................................................................................231.000.00------------1.00----------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCTTC..................................................................................................................251.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTCACG....................................................................................................................231.000.001.00----------------------------
........................................................................................................TGCTGTCACCCAGGCTGGAGCGCATGC.......................................................................................................................271.000.00-1.00---------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGACC...................................................................................................................241.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCGAC..................................................................................................................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGGC....................................................................................................................251.000.001.00----------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGCGA......................................................................................................................231.000.001.00----------------------------
.........................................................................................................................................................................................................AACTAGGACCAAAGGCATTCGC...........................221.000.00-1.00---------------------------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGGCGC..................................................................................................................271.000.001.00----------------------------
...............................................................................................................ACCCAGGCTGGAGCGCAGTGGCCGTG.................................................................................................................261.000.001.00----------------------------
.............CAGGAAGTTGTCCATCACTTGATAGTCCTTTGG............................................................................................................................................................................................................3311.001.00-----------------1.00-----------
.............................................................................................................TCACCCAGGCTGGAGCGCAGTGGGACT..................................................................................................................271.000.00-1.00---------------------------
.......................................................................................................TTGCTGTCACCCAGGCTGGAGCGCAGTGGCG....................................................................................................................3120.500.500.50----------------------------
........................................................................................................TGCTGTCACCCAGGCTGGAGCGCAGTGGCGC...................................................................................................................3120.501.000.50----------------------------
........................................................................................................TGCTGTCACCCAGGCTGGAGCGCAGTGG......................................................................................................................2870.430.430.43----------------------------
......................................................................................................................................................................GGCTCCATCAGTCCTCCCACC...............................................................2130.330.33----0.33------------------------
........................................................................................................TGCTGTCACCCAGGCTGGAGCGCAGTGGC.....................................................................................................................2940.250.250.25----------------------------
........................................................................................................TGCTGTCACCCAGGCTGGAGCGCAGTGGCTC...................................................................................................................3140.250.250.25----------------------------
.AAAATTCTGGCTCAGG.........................................................................................................................................................................................................................................1660.170.17----------------------------0.17
........................................................................................................TGCTGTCACCCAGGCTGGAGCGCAGTGGTGCG..................................................................................................................3270.140.430.14----------------------------
.................................................................................................AGAGTTTTGCTGTCACCCAGGCTG.................................................................................................................................2470.140.14-0.14---------------------------
.................................................................................................AGAGTTTTGCTGTCACCCAGGCTGG................................................................................................................................2570.140.140.14----------------------------

Antisense strand
GAAAATTCTGGCTCAGGAAGTTGTCCATCACTTGATAGTCCTTTGGATGGGTAATGTTTATCGTAGTTTTTGGAGGGTTTATTTGTTTATTTGAGACAGAGTTTTGCTGTCACCCAGGCTGGAGCGCAGTGGCGTGAATGCGGCTTACTGCAGCCTTGACCTCCTTGGCTCCATCAGTCCTCCCACCTCTGACCCCCGAGGAACTAGGACCAAAGGCATTTGCTATTAATACCACATCTGGCTATTTTGT
........................................................................((.(((...(((((((.....))))))).....))).))..((.....)).((((....))))...................................................................................................................
....................................................................69..................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189786SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189787SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925PAZD5SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................................TTGTTTATTTGAGACAGAGTTTTGG............................................................................................................................................... 252.000.00------2.00----------------------
...................................................................................................................................................CTGCAGCCTTGACCTCCTAGC.................................................................................. 211.000.00---------------------1.00-------
....................................................................................................................GGCTGGAGCGCAGTGGCGTAGGC............................................................................................................... 231.000.001.00----------------------------
....................................................................................................................GGCTGGAGCGCAGTGGCGTGAACGGG............................................................................................................ 261.000.00-1.00---------------------------
..................................................................................................................................................ACTGCAGCCTTGACCTCCTTATC................................................................................. 231.000.00-----------1.00-----------------
..........................................................................................................................................................................GTGGGAGGACTGATGG................................................................ 1660.170.17---------------------------0.17-