ID: uc002taw.3_intron_3_0_chr2_101881510_f.5p
GENE: (4)
chr2:101881460-101881709+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(2)
AGO3.ip
(4)
B-CELL
(1)
BRAIN
(1)
BREAST
(34)
CELL-LINE
(2)
HEART
(4)
HELA
(5)
LIVER
(1)
OTHER
(8)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
TAATGGCCAAAGCCTTCAAAAGCCCCTTATCCTCTCCCCAACAAACACAGGTGTGTATTGATTGTAAGCATTTTCTTATCTTTTTTTTTAAATTTATTTTTAATTAAAAAAATTTGTTTTTGAGACAGAGTCTCACTCGGCTGCCCAGGGTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAGCCTCTGCCTCCCGGGTTCAAGTGATACTCGTGCCTCAGCGCCCCCAGCAGCTGAGACTACAGGCAT
..............................................................................((((......(((((((.(((......))).))))))).....))))(((((..((((((((....)).))))))..(((((((((.((....)))).)))))))..)))))............................................................
.....................................................................70......................................................................................................................190..........................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR189787SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR343335GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR343337SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR038852(GSM458535)
QF1160MB. (cell line)
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGAA................................................................24026.006.00--2.00-14.00-2.002.00---3.00-1.00-1.00------------------1.00-------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAT..................................................................2212.000.00-8.00------1.00---2.00----------------------1.00------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCT...................................................................219.000.00-8.00----------------------------------------------------1.00-----------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCTA..................................................................227.000.00-6.00-----------------1.00----------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAG..................................................................2206.006.00-1.00-----------1.00-2.00--1.001.00----------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGGAA...............................................................2505.006.00--5.00---------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCTA..................................................................215.000.00-5.00----------------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCATAAG...............................................................255.000.00--5.00---------------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGAATT..............................................................2605.006.00--5.00---------------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGAAT...............................................................2504.006.00---------3.00---1.00----------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCTGA.................................................................224.000.00--4.00---------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCAGATC...............................................................2404.003.00-----------------4.00------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCAGAA................................................................2303.003.00-----------2.00--------------------------1.00---------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGT.................................................................2303.006.00-3.00----------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCAG..................................................................2103.003.00-3.00----------------------------------------------------------------
..........................................................................CTTATCTTTTTTTTTATAAG............................................................................................................................................................203.000.00-----1.00----1.00---1.00---------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCACTT................................................................243.000.00-3.00----------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCAT..................................................................212.000.00------------1.00-----1.00-----------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCATAAG...............................................................242.000.00---------------------2.00--------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCATGA................................................................232.000.00-1.00---------------------1.00------------------------------------------
..........................................................................CTTATCTTTTTTTTTAAAG.............................................................................................................................................................192.000.00-----2.00------------------------------------------------------------
.................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCGGGCTCG...............................................262.000.00---2.00--------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCAGAAT...............................................................2402.003.00--2.00---------------------------------------------------------------
...................................................................................................................................................................................TGCAGCCTCTGCCTCCCGGGCCG................................................232.000.002.00-----------------------------------------------------------------
.........................................................................................................................................................AGTGCAGTGGCACGATCTCGGCTCACTCGAC..................................................................312.000.00--------------------------2.00---------------------------------------
...........................................................................TTATCTTTTTTTTTAAATTTAAATG......................................................................................................................................................252.000.00-----2.00------------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCATAAT...............................................................252.000.00--------------------2.00---------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCTTTT................................................................232.000.00------2.00-----------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCT...................................................................202.000.00-1.00------1.00---------------------------------------------------------
............................................................................................................................................................GCAGTGGCACGATCTCGGCTAAA.......................................................................232.000.00------------------------------1.00--1.00--------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTTCA...................................................................212.000.00-2.00----------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCACAA................................................................232.000.00--2.00---------------------------------------------------------------
........................................................................TTCTTATCTTTTTTTTATTG..............................................................................................................................................................201.000.00-----1.00------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCAC..................................................................211.000.00-------------------1.00----------------------------------------------
............................................................................TATCTTTTTTTTTAACAAT...........................................................................................................................................................191.000.00------------------------1.00-----------------------------------------
.......................................................................................................................TTGAGACAGAGTCTCACTCGGCTGCCC........................................................................................................2711.001.00---1.00--------------------------------------------------------------
..............................................................................................................................................................................CTCACTGCAGCCTCTGCCCAGG......................................................221.000.001.00-----------------------------------------------------------------
.....................................................................ATTTTCTTATCTTTTTTTTTG................................................................................................................................................................211.000.00--------------1.00---------------------------------------------------
.................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCGGGTTACAG.............................................281.000.00---1.00--------------------------------------------------------------
.......................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCTGCCTCCGTG....................................................311.000.001.00-----------------------------------------------------------------
...........................................................................................................................................................................................CTGCCTCCCGGGTTCAATTAT..........................................211.000.00----------------1.00-------------------------------------------------
.......................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCTGCCTCCGGGC...................................................321.000.00---1.00--------------------------------------------------------------
.................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCGGGGCC................................................251.000.00---1.00--------------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCATAT................................................................241.000.00----------------------------------------------1.00-------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCCAGC................................................................241.000.00-------1.00----------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCACAAA...............................................................251.000.00-------------------------------------------------1.00----------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCC...................................................................211.000.00-------1.00----------------------------------------------------------
.............................................................................................................................................................CAGTGGCACGATCTCGGCTCAAGT.....................................................................241.000.00---------------------------------------------------1.00--------------
...............................................................................CTTTTTTTTTAAATTCCAT........................................................................................................................................................191.000.00----------1.00-------------------------------------------------------
...........................................................................................................................................................TGCAGTGGCACGATCTCGGCTAAC.......................................................................241.000.00------------1.00-----------------------------------------------------
.........................................................................TCTTATCTTTTTTTTTAAATTTAAATG......................................................................................................................................................271.000.00-----1.00------------------------------------------------------------
.........................................................................................................................................................AGTGCAGTGGCACGATCTCGGCTAT........................................................................251.000.00-----------------------------------------------------------------1.00
............................................................................TATCTTTTTTTTTAAAGG............................................................................................................................................................181.000.00---1.00--------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCAGCCTCTGAA..........................................................291.000.00--------------------------------1.00---------------------------------
...........................................................................................................................................................TGCAGTGGCACGATCTCGGCTAGA.......................................................................241.000.00----------------------------------------1.00-------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCCCG.................................................................231.000.00----------------------------------------------------------1.00-------
................................................................................TTTTTTTTTAAATTTATTCCCG....................................................................................................................................................221.000.00--------------1.00---------------------------------------------------
............................................ACACAGGTGTGTATTGA.............................................................................................................................................................................................1711.001.001.00-----------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCAGGAA...............................................................2401.003.00-----------------------1.00------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGATT...............................................................2501.006.00---------1.00--------------------------------------------------------
..........................................................................CTTATCTTTTTTTTTATAA.............................................................................................................................................................191.000.00----------1.00-------------------------------------------------------
........................CCTTATCCTCTCCCCAACAAACACAGCT......................................................................................................................................................................................................2811.001.00-------------------------------------1.00----------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGAAA...............................................................2501.006.00-------------------------------1.00----------------------------------
............................................................................................................................ACAGAGTCTCACTCGGCTGCCCAGGCTGG.................................................................................................291.000.001.00-----------------------------------------------------------------
.............................................................................................................................................................................GCTCACTGCAGCCTCTGCCCTGG......................................................231.000.001.00-----------------------------------------------------------------
.................................................................................................................................................................................................................ACTCGTGCCTCAGCGCCCCCAGCAGCCGAG...........301.000.00---1.00--------------------------------------------------------------
....................................................................................................................................................................ACGATCTCGGCTCACTGCATTA................................................................221.000.00---------------------------1.00--------------------------------------
.................................................................................................................................................................................ACTGCAGCCTCTGCCTCGGGG....................................................211.000.001.00-----------------------------------------------------------------
.....................................................................ATTTTCTTATCTTTTTTTTTTTG..............................................................................................................................................................231.000.00-----1.00------------------------------------------------------------
.............................................................................................................................................................................GCTCACTGCAGCCTCTGCCTCGGGT....................................................251.000.001.00-----------------------------------------------------------------
........................CCTTATCCTCTCCCCAACAAACACAG........................................................................................................................................................................................................2611.001.00-----------------------------1.00------------------------------------
..........................................................................CTTATCTTTTTTTTTAGCC.............................................................................................................................................................191.000.00------------------------1.00-----------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCATAGA...............................................................241.000.00-------------------------------------------------------------1.00----
...........................................................................................................................................................TGCAGTGGCACGATCTCGGCTATGT......................................................................251.000.00---------------------------------------------------------1.00--------
...............................................................................................................................................................................TCACTGCAGCCTCTGCCTCCCTTTT..................................................251.000.00--------1.00---------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCACAA................................................................241.000.00----------------------------------------------------1.00-------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCCA..................................................................221.000.00--------------------------------------------------1.00---------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGTAAA..............................................................2601.006.00--------------------1.00---------------------------------------------
............................................................................................................................................CTGCCCAGGGTGGAGTGCAGTGATGC....................................................................................261.000.001.00-----------------------------------------------------------------
...............................................................................CTTTTTTTTTAAATTCTAG........................................................................................................................................................191.000.00-------------------------1.00----------------------------------------
...........................................................................TTATCTTTTTTTTTAAATTTAAAT.......................................................................................................................................................241.000.00--------------1.00---------------------------------------------------
............................................................................................................................................................................................TGCCTCCCGGGTTCAAGTGAGACC......................................241.000.001.00-----------------------------------------------------------------
.................................................................................................................................................................GGCACGATCTCGGCTAAAG......................................................................191.000.00------------------------------------------------------------1.00-----
.............................................................................................................................................TGCCCAGGGTGGAGTGCACGGC.......................................................................................221.000.00---1.00--------------------------------------------------------------
................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCGGGTTCGGG.............................................291.000.00----------------1.00-------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCCTA.................................................................231.000.00----------------------------1.00-------------------------------------
................................................................................................................................................................................................................TACTCGTGCCTCAGCGCCCCCAGCAGCCGAG...........311.000.00---1.00--------------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGTA................................................................2401.006.00-1.00----------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCATGAA...............................................................241.000.00-1.00----------------------------------------------------------------
...............................................................................CTTTTTTTTTAAATTTATTTTTAA...................................................................................................................................................2411.001.00-----1.00------------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAC..................................................................221.000.00--------1.00---------------------------------------------------------
.......CAAAGCCTTCAAAAGCCTGG...............................................................................................................................................................................................................................201.000.00----------------------1.00-------------------------------------------
...............................................................................................................................................................................TCACTGCAGCCTCTGCCCGT.......................................................201.000.00-------------------------------------------1.00----------------------
.......................................................................TTTCTTATCTTTTTTTTGC................................................................................................................................................................191.000.00---1.00--------------------------------------------------------------
..............................................................................................................................................GCCCAGGGTGGAGTGCAGTGTCT.....................................................................................231.000.001.00-----------------------------------------------------------------
..........................................................................................................................................................................................................................................CTGAGACTACAGGCATAAGA201.000.00--------------------------------------------1.00---------------------
............................................................................TATCTTTTTTTTTAAATTTAAATG......................................................................................................................................................241.000.00----------1.00-------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCAGAAG...............................................................2501.006.00---------------------1.00--------------------------------------------
...............................CTCTCCCCAACAAACACAG........................................................................................................................................................................................................1911.001.00-----------------------------1.00------------------------------------
............................................................................................................................................................GCAGTGGCACGATCTCGGCTATAA......................................................................241.000.00-----------------------------------------------1.00------------------
..............................................................................................................................................................................................CCTCCCGGGTTCAAGTGATACTCTTGT.................................271.000.00----------------1.00-------------------------------------------------
............................................................................................................................................................GCAGTGGCACGATCTCGGCTCAAAA.....................................................................251.000.00-----------------------------------------------------1.00------------
..............................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCGGGTCAAG..............................................301.000.00-------------------------1.00----------------------------------------
..................................................................................................................................................................................CTGCAGCCTCTGCCTCCCGGTTCC................................................241.000.00---1.00--------------------------------------------------------------
.........................................................................................................................................................AGTGCAGTGGCACGATCTCGGCTAAA.......................................................................261.000.00------------------------------------------------1.00-----------------
................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCGGGTAA................................................261.000.00---------------------------------------------1.00--------------------
.............................................................................................................................................................CAGTGGCACGATCTCGGCTCAAGA.....................................................................241.000.00-1.00----------------------------------------------------------------
.............................................................................................................................................................................GCTCACTGCAGCCTCTGCCTCAAA.....................................................241.000.00-----------------------------------------1.00------------------------
.................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCGGGAGG................................................251.000.00---1.00--------------------------------------------------------------
.............................................................................ATCTTTTTTTTTAAATTTATTTCGG....................................................................................................................................................251.000.001.00-----------------------------------------------------------------
.............................................................................................................................................................CAGTGGCACGATCTCGGCTGTA.......................................................................221.000.00------------------------------------------1.00-----------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGCACC.................................................................221.000.00-------------1.00----------------------------------------------------
..........................................................................................................................................................................TCGGCTCACTGCAGCCTCTGCCACT.......................................................251.000.00---1.00--------------------------------------------------------------
.............................................................................ATCTTTTTTTTTAAACAAG..........................................................................................................................................................191.000.00--------------1.00---------------------------------------------------
............................................................................................................................................................GCAGTGGCACGATCTCGGCTCTAT......................................................................241.000.00--------------------------------------------------------1.00---------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCTATA................................................................241.000.00--------1.00---------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCACAG................................................................241.000.00----------------------1.00-------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCACATA...............................................................251.000.00---------1.00--------------------------------------------------------
..................................................................................................................................................................GCACGATCTCGGCTCACTGCATTT................................................................241.000.00---------1.00--------------------------------------------------------
............................ATCCTCTCCCCAACAAACACAG........................................................................................................................................................................................................2211.001.00--------------------------------------------------------------1.00---
...................................................................................................................................................................CACGATCTCGGCTCACTGCACAAG...............................................................241.000.00---------------1.00--------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTTCA...................................................................201.000.00------------------1.00-----------------------------------------------
.............................................................................................................................................TGCCCAGGGTGGAGTGCAGT.........................................................................................2001.001.00------------1.00-----------------------------------------------------
.............................................................................ATCTTTTTTTTTAAATTTAAATG......................................................................................................................................................231.000.00----------1.00-------------------------------------------------------
............................................................................................................................................CTGCCCAGGGTGGAGTGCAGTGGCAC....................................................................................2660.330.33---0.33--------------------------------------------------------------
.............................................................................ATCTTTTTTTTTAAATTTATATT......................................................................................................................................................2350.200.20-----0.20------------------------------------------------------------
.............................................................................ATCTTTTTTTTTAAATTTATCTAG.....................................................................................................................................................2450.200.20-------------------------0.20----------------------------------------
.............................................................................ATCTTTTTTTTTAAATTTAT.........................................................................................................................................................2050.200.20-------------------------0.20----------------------------------------
..........................................................................................................................................GGCTGCCCAGGGTGGA................................................................................................1690.110.11---0.11--------------------------------------------------------------

Antisense strand
TAATGGCCAAAGCCTTCAAAAGCCCCTTATCCTCTCCCCAACAAACACAGGTGTGTATTGATTGTAAGCATTTTCTTATCTTTTTTTTTAAATTTATTTTTAATTAAAAAAATTTGTTTTTGAGACAGAGTCTCACTCGGCTGCCCAGGGTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAGCCTCTGCCTCCCGGGTTCAAGTGATACTCGTGCCTCAGCGCCCCCAGCAGCTGAGACTACAGGCAT
..............................................................................((((......(((((((.(((......))).))))))).....))))(((((..((((((((....)).))))))..(((((((((.((....)))).)))))))..)))))............................................................
.....................................................................70......................................................................................................................190..........................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR189787SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR343335GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR343337SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR038852(GSM458535)
QF1160MB. (cell line)
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTCAGGG............................................ 255.000.004.00--1.00--------------------------------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTGGG.............................................. 235.000.005.00-----------------------------------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTGGG............................................... 223.000.003.00-----------------------------------------------------------------
...................................................................................................................................................GGGTGGAGTGCAGTGGCACGATGGGC............................................................................. 263.000.001.00--2.00--------------------------------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTCAGCG............................................ 253.000.003.00-----------------------------------------------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTTCAAGTTT.......................................... 252.000.00------2.00-----------------------------------------------------------
...........................................................................................................................................................................................CGAGTATCACTTGAACCCGGGAGGCAG.................................... 2712.002.00------2.00-----------------------------------------------------------
......................................................................................................................................................................................AGCCTCTGCCTCCCGGGTTCATAT............................................ 241.000.00------1.00-----------------------------------------------------------
...............................................................................................................................................................................TCACTGCAGCCTCTGCCTCCCGGGTAGC............................................... 281.000.001.00-----------------------------------------------------------------
....................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTGGCG.............................................. 241.000.001.00-----------------------------------------------------------------
....................................................................................................................................................................GCTGCAGTGAGCCGAGATCGT................................................................. 2101.001.00-------------1.00----------------------------------------------------
............................................................................................................................................................................................TGCCTCCCGGGTTCAAGTATTT........................................ 221.000.00----------------------------------------------------------------1.00-
..........................................................................................................................................................................................TCTGCCTCCCGGGTTCAAGTTG.......................................... 221.000.00-------1.00----------------------------------------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTTCGCGG............................................ 231.000.001.00-----------------------------------------------------------------
....................................................................................................................................................GGTGGAGTGCAGTGGCACGATCTCGGCTCA........................................................................ 301.000.00-----------------------1.00------------------------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTAGGG.............................................. 211.000.00---1.00--------------------------------------------------------------
..................................................................................................................................................................................CTGCAGCCTCTGCCTCCCGGGTTCACTG............................................ 281.000.001.00-----------------------------------------------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTTCAAGTGATACT...................................... 291.000.001.00-----------------------------------------------------------------
....................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTCAAG.............................................. 241.000.00---------------------------1.00--------------------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTTGATG............................................. 221.000.00---1.00--------------------------------------------------------------
..............................................................................................................................................GCCCAGGGTGGAGTGCAGTGTTCT.................................................................................... 241.000.00----------------------1.00-------------------------------------------
...................................................................................................................................................................................TGCAGCCTCTGCCTCCCGGGTTCAAGCG........................................... 281.000.00---1.00--------------------------------------------------------------
......................................................................................................................................................................................AGCCTCTGCCTCCCGGGTTTA............................................... 211.000.001.00-----------------------------------------------------------------
........................................................................................................................................................................................................................................ATGCCTGTAGTCTCAGCT 1801.001.00-------1.00----------------------------------------------------------
.................................................................................................................................................CAGGGTGGAGTGCAGTGGCACGATAACG............................................................................. 281.000.001.00-----------------------------------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGGGG................................................ 211.000.00---------------------------------------------------------------1.00--
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTCAAGTGATGTGT..................................... 321.000.001.00-----------------------------------------------------------------
...........................................................................................................................................................TGCAGTGGCACGATCTCGGCTATA....................................................................... 241.000.00-1.00----------------------------------------------------------------
...................................................................................................................................................................................TGCAGCCTCTGCCTCCCGGGTTCTTC............................................. 261.000.001.00-----------------------------------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTAGCC.............................................. 231.000.001.00-----------------------------------------------------------------
....................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTTGAG.............................................. 241.000.001.00-----------------------------------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTCAAGGAA.......................................... 271.000.00------------------------------1.00-----------------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTTGTG.............................................. 211.000.001.00-----------------------------------------------------------------
..................................................................................................................................................................................................................CTCGTGCCTCAGCGCCCCCAG................... 211.000.001.00-----------------------------------------------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTTGCAG............................................. 221.000.00---1.00--------------------------------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTGGC.............................................. 231.000.001.00-----------------------------------------------------------------
...............................................................................................................................................................GTGGCACGATCTCGGCTCACTGCAGCGG............................................................... 281.000.00------------------------1.00-----------------------------------------
....................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTTCACGCG........................................... 271.000.001.00-----------------------------------------------------------------
................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCGGGTGACC.............................................. 281.000.001.00-----------------------------------------------------------------
.....................................................................................................................................................................CGATCTCGGCTCACTGCAGCCTATCC........................................................... 261.000.001.00-----------------------------------------------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTTCAAGTCTC......................................... 261.000.001.00-----------------------------------------------------------------
..................................................................................................................................................................................CTGCAGCCTCTGCCTCCCGGGTTAC............................................... 251.000.001.00-----------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACTGA.................................................................... 191.000.00--------1.00---------------------------------------------------------
....................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTTCAGAT............................................ 261.000.001.00-----------------------------------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTCAAGTGGG......................................... 281.000.001.00-----------------------------------------------------------------
..................................................................................................................................................................................CTGCAGCCTCTGCCTCCCGGGTTCAAAGCT.......................................... 301.000.00---1.00--------------------------------------------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTCGCC.............................................. 211.000.00-------------------------------------------------------1.00----------
..............................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCGGGAGA................................................ 281.000.00----------------------------1.00-------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTCAAGTGATTCC...................................... 311.000.001.00-----------------------------------------------------------------
.........................................................................................................................TGGGCAGCCGAGTGAGACTCTGTCTC....................................................................................................... 2611.001.001.00-----------------------------------------------------------------
.................................................................................................................................................................................ACTGCAGCCTCTGCCTCGC...................................................... 191.000.00---------------------------------------1.00--------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTGAA.............................................. 231.000.00------------------------------------1.00-----------------------------
.......................................................................................................................................................................................GCCTCTGCCTCCCGGGTTCAAGTGAAACA...................................... 291.000.00----------------1.00-------------------------------------------------
....................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTCGC............................................... 231.000.001.00-----------------------------------------------------------------
...................................................................................................................................................................CACGATCTCGGCTCACATAA................................................................... 201.000.00-----------------------------------------------------------1.00------
...................................................................................................................................................GGGTGGAGTGCAGTGGCACGATGAGC............................................................................. 261.000.00---1.00--------------------------------------------------------------
.....................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTCAAGGA........................................... 261.000.001.00-----------------------------------------------------------------