ID: uc002rhb.1_intron_13_0_chr2_26540431_r.5p
GENE: GPR113(1)
chr2:26568379-26568628-


(1)
AGO2.ip 		(20)
B-CELL 		(1)
BRAIN 		(9)
BREAST 		(35)
CELL-LINE 		(5)
CERVIX 		(5)
HEART 		(3)
HELA 		(4)
LIVER 		(1)
OTHER 		(2)
RRP40.ip 		(12)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
AGTCTTGGGGGTAGAGTGACTGCTTGCGAACCAGTTCAGCAGTGCCTCAGGTAAGAGGACTTAGTTCTCCCGCTGCAGCGAAGTAAAAGAGGAAGGAGGTCTGTACCGCGAGCCGCTCCCAGCTCCTGGTGCGGTGCGCTGCGTGCCGTAGAAATTTAGTAAACGTGGTTAGATGTAGAGAAGGCCGAGCTGCTGCCGGGGCCACGGGAGTCTTTGTGCGGTCAGCAGAGGGACTTGAAAGACAGGTGAA
......................................................((((((...))))))((((.(((((...............((...(((.(((....((((((..((((...))))(((((..((...))..)))))..............))))))....))).)))...))..))))).)).))...................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343334SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577740(Rovira)
total RNA. (breast)		GSM339994(GSM339994)
hues6. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		TAX577739(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR040033(GSM532918)
G603T. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR040015(GSM532900)
G623T. (cervix)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR029129(GSM416758)
SW480. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
........GGGTAGAGTGACTGCTTG................................................................................................................................................................................................................................18117.0017.00-----1.004.00---1.00------2.00----1.00--3.00------2.00--------------------------------1.00-------------1.00-----1.00-------------
.................................................................................................................................................................................................................................CAGAGGGACTTGAAAGAC.......18110.0010.0010.00--------------------------------------------------------------------------------------------------
................................................AGGTAAGAGGACTTAGTT........................................................................................................................................................................................1817.007.00----------------3.00---------1.00------------1.00----1.00-------------------------------1.00----------------------
............................................................................................................................................................................ATGTAGAGAAGGCCGAGCTG..........................................................2017.007.00----------1.00--------1.00---------------2.00------------1.00-------------------1.00----------------------1.00-------
....TTGGGGGTAGAGTGACTG....................................................................................................................................................................................................................................1826.506.500.50-1.50------1.000.50-----------------------------------1.50----------------------------------------------0.500.500.50---
....TTGGGGGTAGAGTGACTGCT..................................................................................................................................................................................................................................2015.005.00-----------1.00--------1.00---1.00----------------------1.00-----1.00---------------------------------------------
....................................................................................................................................................................GTGGTTAGATGTAGAGAAGGCC................................................................2215.005.00-3.00-------------------------------------------------------------------------------------1.00-1.00---------
....TTGGGGGTAGAGTGACTGCTT.................................................................................................................................................................................................................................2115.005.00----5.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................AGAGGGACTTGAAAGAC.......1714.004.004.00--------------------------------------------------------------------------------------------------
..................................................GTAAGAGGACTTAGTTC.......................................................................................................................................................................................1714.004.00-4.00-------------------------------------------------------------------------------------------------
................................AGTTCAGCAGTGCCTCAGG.......................................................................................................................................................................................................1914.004.00---------4.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................ATGTAGAGAAGGCCGAGCTGC.........................................................2114.004.00----------2.00--------1.00-------1.00-----------------------------------------------------------------------
..............AGTGACTGCTTGCGAACCAG........................................................................................................................................................................................................................2014.004.00-----------2.00---1.00-----------1.00-----------------------------------------------------------------------
..................................TTCAGCAGTGCCTCAGGTAAGAGGACT.............................................................................................................................................................................................2713.003.00--------3.00------------------------------------------------------------------------------------------
................TGACTGCTTGCGAACCAG........................................................................................................................................................................................................................1813.003.00--------2.00------------1.00-----------------------------------------------------------------------------
..........................................................................................................................................................................AGATGTAGAGAAGGCCGAG.............................................................1913.003.00-------------3.00-------------------------------------------------------------------------------------
.......................................................................................................................................................................GTTAGATGTAGAGAAGGC.................................................................1813.003.003.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AGGGACTTGAAAGACAGG....1813.003.00--1.00------------------------------------------1.00----------------------------1.00------------------------
........GGGTAGAGTGACTGCTTGC...............................................................................................................................................................................................................................1913.003.00-----1.00------------------------------1.00----------------------1.00---------------------------------------
.........GGTAGAGTGACTGCTTGCGAACCAG........................................................................................................................................................................................................................2513.003.00--------------------1.002.00-----------------------------------------------------------------------------
......................................................................................AAGAGGAAGGAGGTCTGTACCA..............................................................................................................................................223.000.00------------------3.00--------------------------------------------------------------------------------
..............................................................................................................................................................................GTAGAGAAGGCCGAGCTG..........................................................1823.003.00---------------------1.001.00---------------------------------------------------------------------0.50---0.50--
.............GAGTGACTGCTTGCGAACCAG........................................................................................................................................................................................................................2112.002.00--2.00------------------------------------------------------------------------------------------------
....TTGGGGGTAGAGTGACTGC...................................................................................................................................................................................................................................1912.002.00----------------------------------1.00---------------------------------------------1.00------------------
............................................................................................................................................................................ATGTAGAGAAGGCCGAGCTGCT........................................................2212.002.00-------2.00-------------------------------------------------------------------------------------------
.....................................................................................................................................................................TGGTTAGATGTAGAGAAGGCCGAG.............................................................2412.002.00---------------------------------------------1.00----------------1.00------------------------------------
.GTCTTGGGGGTAGAGTGAC......................................................................................................................................................................................................................................1912.002.00--1.001.00-----------------------------------------------------------------------------------------------
..........GTAGAGTGACTGCTTGCGAAC...........................................................................................................................................................................................................................2112.002.00--------------------------------------------------1.00---------------------------1.00--------------------
.............................................CTCAGGTAAGAGGACTTA...........................................................................................................................................................................................1812.002.00-----1.00--------------1.00------------------------------------------------------------------------------
.................................................................................................................................................................AACGTGGTTAGATGTAGAGA.....................................................................2012.002.00---2.00-----------------------------------------------------------------------------------------------
...CTTGGGGGTAGAGTGACTGCTTG................................................................................................................................................................................................................................2312.002.00--2.00------------------------------------------------------------------------------------------------
.GTCTTGGGGGTAGAGC.........................................................................................................................................................................................................................................162.000.00---------------------------------1.00---------------------------1.00-------------------------------------
............................................................................................................................................................................ATGTAGAGAAGGCCGAG.............................................................1712.002.00--------------2.00------------------------------------------------------------------------------------
....TTGGGGGTAGAGTGACTGCTTG................................................................................................................................................................................................................................2212.002.00-1.00-------------------------------------------------------------1.00-----------------------------------
...........................................................................................................................................................................GATGTAGAGAAGGCCGAGCTG..........................................................2112.002.00------------1.00---1.00----------------------------------------------------------------------------------
....................................................................................................................TCCCAGCTCCTGGTGCGGT...................................................................................................................1912.002.002.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................................................AGATGTAGAGAAGGCAAC..............................................................182.000.00------------------------2.00--------------------------------------------------------------------------
......GGGGGTAGAGTGACTGCAA.................................................................................................................................................................................................................................192.000.00-------------------2.00-------------------------------------------------------------------------------
.............................................CTCAGGTAAGAGGACTTAG..........................................................................................................................................................................................1912.002.00------------1.00----1.00---------------------------------------------------------------------------------
.......................................................................................................................................................................GTTAGATGTAGAGAAGGCCG...............................................................2012.002.00----------------------1.00------1.00---------------------------------------------------------------------
........GGGTAGAGTGACTGCTTGCGAACCAGT.......................................................................................................................................................................................................................2712.002.00------------------1.00---------------------------------------------------1.00----------------------------
....TTGGGGGTAGAGTGACT.....................................................................................................................................................................................................................................1721.501.50--1.00-----------0.50------------------------------------------------------------------------------------
............................................................................................................................................................TAGTAAACGTGGTTAGATGTAGAGAA....................................................................2611.001.00-------------------------------------1.00-------------------------------------------------------------
..........GTAGAGTGACTGCTTGCGAACCA.........................................................................................................................................................................................................................2311.001.00-------------------------------1.00-------------------------------------------------------------------
..................................................................................GTAAAAGAGGAAGGAGGTCTG...................................................................................................................................................2111.001.00----------------------------1.00----------------------------------------------------------------------
.............GAGTGACTGCTTGCGAACCAGA.......................................................................................................................................................................................................................2211.002.00-----1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................TTAGATGTAGAGAAGGCCGA..............................................................2011.001.00---------------------------------------------------------1.00-----------------------------------------
......................................................................................................................................................GAAATTTAGTAAACGTGGTTAGATGTAGAGAAGGCCGAGCTGCTGCCGGGGCCACGGGAGTCTTTGTGCGGTCAGCAGAGGGACTTGAAAGACAGGT...9711.001.00------------------------------------------------------------------------------------------1.00--------
......GGGGGTAGAGTGACTGCT..................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------1.00--------------------------------------
.....................................................................................................................................................................TGGTTAGATGTAGAGAAGG..................................................................1911.001.00--1.00------------------------------------------------------------------------------------------------
........................................................................................GAGGAAGGAGGTCTGTACCGCGA...........................................................................................................................................2311.001.00----------------------------------1.00----------------------------------------------------------------
....................................................................................................................................................................GTGGTTAGATGTAGAGAAGGCCGA..............................................................2411.001.00------------------------------------------1.00--------------------------------------------------------
...CTTGGGGGTAGAGTGACTGCTTGCG..............................................................................................................................................................................................................................2511.001.00------------------------------------------------------1.00--------------------------------------------
........................................................................................GAGGAAGGAGGTCTGTACGGAG............................................................................................................................................221.000.00--------------------1.00------------------------------------------------------------------------------
...CTTGGGGGTAGAGTGACTG....................................................................................................................................................................................................................................1911.001.00---1.00-----------------------------------------------------------------------------------------------
..............AGTGACTGCTTGCGAACCAGTTCAGC..................................................................................................................................................................................................................2611.001.00-------------------------------------------1.00-------------------------------------------------------
.............................................................................................AGGAGGTCTGTACCGCGAG..........................................................................................................................................1911.001.00----------------------------------------------------1.00----------------------------------------------
.....................GCTTGCGAACCAGTTCAGCAA................................................................................................................................................................................................................211.000.00------------------------------------------------------------------1.00--------------------------------
...CTTGGGGGTAGAGTGACTGCTT.................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------1.00----------------------------------
........GGGTAGAGTGACTGCTTGCGAACCA.........................................................................................................................................................................................................................2511.001.00---------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................................TTGTGCGGTCAGCAGAGGGACT...............2211.001.00-----------------------------------------------------------------------1.00---------------------------
...CTTGGGGGTAGAGTGACGG....................................................................................................................................................................................................................................191.000.00---1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................GTGGTTAGATGTAGAGAAGGCCG...............................................................2311.001.00--------------------------------------------------------1.00------------------------------------------
.......................................................................................AGAGGAAGGAGGTCTGGAC................................................................................................................................................191.000.00-----------------1.00---------------------------------------------------------------------------------
....................................................................................................................................................................GTGGTTAGATGTAGAGAAGGCCGGG.............................................................2511.001.00-------1.00-------------------------------------------------------------------------------------------
.........................................................................................AGGAAGGAGGTCTGTACCGC.............................................................................................................................................2011.001.00---------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................AACGTGGTTAGATGTAGAGAA....................................................................2111.001.00-----------------------------1.00---------------------------------------------------------------------
...............GTGACTGCTTGCGAACCAGT.......................................................................................................................................................................................................................2011.001.00---------------------------------1.00-----------------------------------------------------------------
.............................................CTCAGGTAAGAGGACTTAGTTA.......................................................................................................................................................................................221.000.00--------------------------1.00------------------------------------------------------------------------
.............................................................................................................................................................................TGTAGAGAAGGCCGAGCTGCTGCCG....................................................2511.001.00-------------------------------------------------------1.00-------------------------------------------
..........................................................................................................................................................................AGATGTAGAGAAGGCCGAGC............................................................2011.001.00-------------1.00-------------------------------------------------------------------------------------
.GTCTTGGGGGTAGAGTGAATT....................................................................................................................................................................................................................................211.000.00--1.00------------------------------------------------------------------------------------------------
.....TGGGGGTAGAGTGACTGCT..................................................................................................................................................................................................................................1911.001.00--------------------------------------------1.00------------------------------------------------------
...................................................................................TAAAAGAGGAAGGAGGTCTGTA.................................................................................................................................................2211.001.00------------1.00--------------------------------------------------------------------------------------
...........................................GCCTCAGGTAAGAGGACTTAGTTCTCCCGC.................................................................................................................................................................................3011.001.00-1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................GTGGTTAGATGTAGAGAAG...................................................................1911.001.00----------------------------------------------------------------------------------------1.00----------
......GGGGGTAGAGTGACTGCTTGCGAACCAG........................................................................................................................................................................................................................2811.001.00-----1.00---------------------------------------------------------------------------------------------
............AGAGTGACTGCTTGCGAAC...........................................................................................................................................................................................................................1911.001.00---------------------------------------------------------------------1.00-----------------------------
.....TGGGGGTAGAGTGACTGC...................................................................................................................................................................................................................................1811.001.00------------------------------------------1.00--------------------------------------------------------
.........................................................................................................................................................................................................................GCGGTCAGCAGAGGGATG...............181.000.00------------------------------------------------------------------------1.00--------------------------
............................................................................................AAGGAGGTCTGTACCGCGAGC.........................................................................................................................................2111.001.00---1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................TAGATGTAGAGAAGGCCGAGCTGCT........................................................2511.001.00-------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................................................................................................................................GGGACTTGAAAGACAGGTGA.2011.001.00----------------------------------------1.00----------------------------------------------------------
............................................................................................................................................................................ATGTAGAGAAGGCCGAGCTGCTG.......................................................2311.001.00-----------------------------------------1.00---------------------------------------------------------
...........TAGAGTGACTGCTTGCGAACCA.........................................................................................................................................................................................................................2211.001.00-------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GCCGGGGCCACGGGAGTCT.....................................1911.001.00-------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GCAGAGGGACTTGAAAGACAGG....2211.001.00-------------------------------------------1.00-------------------------------------------------------
......GGGGGTAGAGTGACTGCTT.................................................................................................................................................................................................................................1911.001.00----1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................GTGGTTAGATGTAGAGAAGGCCGAG.............................................................2511.001.00--------------------------1.00------------------------------------------------------------------------
...............................................CAGGTAAGAGGACTTAGTA........................................................................................................................................................................................191.000.00----------------------------1.00----------------------------------------------------------------------
......................................................................................AAGAGGAAGGAGGTCTGTAC................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------1.00------------
.....................GCTTGCGAACCAGTTCAG...................................................................................................................................................................................................................1811.001.00-----------------------1.00---------------------------------------------------------------------------
.....................................................................................................................................................................TGGTTAGATGTAGAGAAGGCCG...............................................................2211.001.00---------------1.00-----------------------------------------------------------------------------------
....................................................................................................................................GGTGCGCTGCGTGCCGTAGAA.................................................................................................2111.001.00-1.00-------------------------------------------------------------------------------------------------
................................................AGGTAAGAGGACTTAGTTCTC.....................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------1.00-----------------------
............AGAGTGACTGCTTGCGAACCAG........................................................................................................................................................................................................................2211.001.00------------------------------------1.00--------------------------------------------------------------
............................................................................................AAGGAGGTCTGTACCGCGAGCCGC......................................................................................................................................2411.001.00---------------------------------------------------1.00-----------------------------------------------
........GGGTAGAGTGACTGCTTGCGAAC...........................................................................................................................................................................................................................2311.001.00-------------------------------1.00-------------------------------------------------------------------
..TCTTGGGGGTAGAGTGAC......................................................................................................................................................................................................................................1811.001.00------1.00--------------------------------------------------------------------------------------------
.......................................................................................AGAGGAAGGAGGTCTGTAC................................................................................................................................................1911.001.00------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GGGACTTGAAAGACAGGCGA.201.000.00----------------------------------------1.00----------------------------------------------------------
...............GTGACTGCTTGCGAACCAG........................................................................................................................................................................................................................1911.001.00----------------------------------------------------------1.00----------------------------------------
...CTTGGGGGTAGAGTGACTGCTTGC...............................................................................................................................................................................................................................2411.001.00-----------------------1.00---------------------------------------------------------------------------
...........................................................................................................................................................................GATGTAGAGAAGGCCGA..............................................................1711.001.00--------------1.00------------------------------------------------------------------------------------
.............GAGTGACTGCTTGCGAACCCG........................................................................................................................................................................................................................211.000.00---------------------------------------1.00-----------------------------------------------------------
.GTCTTGGGGGTAGAGTGACTGCTTG................................................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------------1.00---------------------
....................................................................................................................................................................GTGGTTAGATGTAGAGAAGGC.................................................................2111.001.00-----------------------------------------1.00---------------------------------------------------------
........................................................................................GAGGAAGGAGGTCTGTACC...............................................................................................................................................1911.001.00---------------------------------------------------------------------------------1.00-----------------
....................................................................................................................................................................................AAGGCCGAGCTGCTGCCGGGGCCACGGGAGTC......................................3211.001.00-------------------------------------------------------------------------1.00-------------------------
..........GTAGAGTGACTGCTTGCGA.............................................................................................................................................................................................................................1920.500.50-----------------------------0.50---------------------------------------------------------------------
.......................................................................................AGAGGAAGGAGGTCTGTA.................................................................................................................................................1820.500.50----------------------0.50----------------------------------------------------------------------------
...CTTGGGGGTAGAGTGA.......................................................................................................................................................................................................................................1620.500.50-0.50-------------------------------------------------------------------------------------------------
....................................................................................................................................................................GTGGTTAGATGTAGAGAA....................................................................1820.500.50--------------0.50------------------------------------------------------------------------------------
...........TAGAGTGACTGCTTGCGA.............................................................................................................................................................................................................................1820.500.50--0.50------------------------------------------------------------------------------------------------
................................................................................................................................................................................AGAGAAGGCCGAGCTGC.........................................................1720.500.50------------------------------------------------0.50--------------------------------------------------
....TTGGGGGTAGAGTGACTGT...................................................................................................................................................................................................................................1920.506.50------0.50--------------------------------------------------------------------------------------------
.....................................................................................AAAGAGGAAGGAGGTCTG...................................................................................................................................................1820.500.50-----0.50---------------------------------------------------------------------------------------------
....TTGGGGGTAGAGTGACTGAT..................................................................................................................................................................................................................................2020.506.50-----------------------------------------------0.50---------------------------------------------------
..............................................................................................................................................................................GTAGAGAAGGCCGAG.............................................................1530.330.33--------------------------------------------------------------------------------------------0.33------

Antisense strand
AGTCTTGGGGGTAGAGTGACTGCTTGCGAACCAGTTCAGCAGTGCCTCAGGTAAGAGGACTTAGTTCTCCCGCTGCAGCGAAGTAAAAGAGGAAGGAGGTCTGTACCGCGAGCCGCTCCCAGCTCCTGGTGCGGTGCGCTGCGTGCCGTAGAAATTTAGTAAACGTGGTTAGATGTAGAGAAGGCCGAGCTGCTGCCGGGGCCACGGGAGTCTTTGTGCGGTCAGCAGAGGGACTTGAAAGACAGGTGAA
......................................................((((((...))))))((((.(((((...............((...(((.(((....((((((..((((...))))(((((..((...))..)))))..............))))))....))).)))...))..))))).)).))...................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343334SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577740(Rovira)
total RNA. (breast)		GSM339994(GSM339994)
hues6. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		TAX577739(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR040033(GSM532918)
G603T. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR040015(GSM532900)
G623T. (cervix)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR029129(GSM416758)
SW480. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................GCAGCGAAGTAAAAGTG............................................................................................................................................................... 174.000.00------------------------------2.00-------2.00------------------------------------------------------------
....................TGCTTGCGAACCAGTTCAGCA................................................................................................................................................................................................................. 211.000.00-----------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................................TGCTGACCGCACAAAGACTCCCGTGGCCCCGGC....................... 3311.001.00-----------------------1.00---------------------------------------------------------------------------
.........................................................CTGCAGCGGGAGAACTAAGTC............................................................................................................................................................................ 2111.001.00---------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................................................................GAGCTGCTGCCGGGGTC............................................... 171.000.00-------------------------------------------------1.00-------------------------------------------------
............AGAGTGACTGCTTGCGCA............................................................................................................................................................................................................................ 181.000.00-----------------------------------------------------------------------------------1.00---------------
.................................GTTCAGCAGTGCCTCG......................................................................................................................................................................................................... 161.000.00----------------------------------------------------------------------------------1.00----------------
...............................................................................................................GCCGCTCCCAGCTCCTGGCG....................................................................................................................... 201.000.00-------------------------------------------------------------------1.00-------------------------------
...........................................................GCTGCAGCGGGAGAACTAAG........................................................................................................................................................................... 2011.001.00----------------------------1.00----------------------------------------------------------------------
..............................................................AGTTCTCCCGCTGCACTG.......................................................................................................................................................................... 181.000.00------------------------------------------------------------------------------------1.00--------------