ID: uc002nhg.3_intron_14_0_chr19_17886323_f
GENE: FCHO1(15)
chr19:17886273-17886841+


(9)
B-CELL
(4)
BRAIN
(18)
BREAST
(14)
CELL-LINE
(8)
CERVIX
(5)
HEART
(1)
HELA
(3)
LIVER
(2)
OTHER
(1)
RRP40.ip
(20)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
AGAGGTGGATGAAGAAGGTTTCACTGTCCGGCCTGATGTGACCCAGAACAATATCCTTCTGGCACCCCCTGGGGGCAGTTGTTGGCACAGCAAGGACAAAATTCTCCGTAATAACCAGTCCACCTTCAGCAGTCCTCTCTGTGTACATCCTGGAGAGAGTCTCCTTTGTGGATGAAGCCAACCTAAATGTAAACACCCACTCTATGGGGTCAGCACTGGGCAAGAGGGAGAGAGAAAAGGAGATCTAGCAGGGCTTCCTGGAGGAGGGGGCACCAGTGTTGGGGTTTTGCAGCCGAATAGGAGTTTGCCAGTTAGTTCTGGGCATGCTTGTGCAAAGGCTTCTCGGGGGGGGTGGGAGTGCTGGTGGGACATGGTGTCAGGACTGAAGGTGGCGCGTGGTGAGCGATGGGATTGGGCAGGACCTCGAAGGGTTTGAGCAGGGAGGGACGAGGCTGGATTGGAGAGCTGACTGGGGGAAAGCTTGTGTTGGGATTGGCTTGGACCTTGACTGCAGCCCACGCACGGCCGAGCCCTCCCGTTTCTCGTCCAGCGACTCCGACTTCGACGAT
..................................................................................................................................................................................................................................((.....((((......(((((((((((..(((.....)))..)).))..))))))).))))....))........((.((((((......)))).)).))..................................................................................................................................................................................................................................................
............................................................................................................................................................................................................................221.......................................................................................................327................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR037937(GSM510475)
293cand2. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR029131(GSM416760)
MCF7. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
TAX577739(Rovira)
total RNA. (breast)
SRR029127(GSM416756)
A549. (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR343337SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191469(GSM715579)
117genomic small RNA (size selected RNA from . (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343336GSM532871(GSM532871)
G652N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR040009(GSM532894)
G727T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040038(GSM532923)
G531N. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
SRR029130(GSM416759)
DLD2. (cell line)
SRR189786SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR040024(GSM532909)
G613N. (cervix)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
.................................................................................................................................................................................................................................GGGAGAGAGAAAAGGAGGACA...................................................................................................................................................................................................................................................................................................................................2110.000.00-10.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................TTTGCCAGTTAGTTCTGCTA......................................................................................................................................................................................................................................................20210.002.00---------1.00---2.00--2.00--------------------------1.001.001.00----1.00------------------1.00------------------------
...........................................................................................................................................................................................TGTAAACACCCACTCTCAG...........................................................................................................................................................................................................................................................................................................................................................................199.000.008.00----------------------1.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................TTTGCCAGTTAGTTCTTATA......................................................................................................................................................................................................................................................207.000.00-------2.00----1.00-----------------1.00---1.00------------------1.00-------1.00--------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................AGGACTGAAGGTGGCGC..............................................................................................................................................................................1714.004.00-----2.00--------------2.00-------------------------------------------------------------------------
..............................................AACAATATCCTTCTGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................183.000.00--------2.00-------------------------------------------------1.00-----------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................AGGACTGAAGGTGGCGCC.............................................................................................................................................................................1813.004.00---------------------1.00----------1.00---1.00---------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGATTGGCTTGGACCTTG..............................................................2213.003.00----3.00-----------------------------------------------------------------------------------------
..AGGTGGATGAAGAAGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003.00--3.00-------------------------------------------------------------------------------------------
..AGGTGGATGAAGAAGGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003.00--1.00-------------------------------------------1.00--1.00--------------------------------------------
.................GTTTCACTGTCCGGCCTGATGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00---------------2.00------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................TTTGCCAGTTAGTTCTCATA......................................................................................................................................................................................................................................................202.000.00------------------1.00----------------------------------------1.00----------------------------------
...............................................................................................................................................................................................................................................................................................................TTTGCCAGTTAGTTCTG.........................................................................................................................................................................................................................................................1722.002.00-----------------------------------------------------------------------0.50-0.50-0.500.50-----------------
................................................................................................................................................................................................................................................................................................................TTGCCAGTTAGTTCTCATA......................................................................................................................................................................................................................................................192.000.00-------1.00-1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TTGCCAGTTAGTTCTGGTA......................................................................................................................................................................................................................................................192.000.00---2.00------------------------------------------------------------------------------------------
...........................................................................................................................................................................................TGTAAACACCCACTCCCAC...........................................................................................................................................................................................................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TTCTCGGGGGGGGTGTGA....................................................................................................................................................................................................................181.000.00------------------------1.00---------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................TGGGGTTTTGCAGCCGGG................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------1.00----------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................GTGGGAGTGCTGGTGGGACATGGTGCC...............................................................................................................................................................................................271.000.00-----------------------------------------------1.00----------------------------------------------
...............................................................................................................................................................................................................GGTCAGCACTGGGCAAGAGGGAGAGAGAAAAG..........................................................................................................................................................................................................................................................................................................................................3211.001.00-----------------------------------1.00----------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TTGCCAGTTAGTTCTAATA......................................................................................................................................................................................................................................................191.000.00---1.00------------------------------------------------------------------------------------------
......GGATGAAGAAGGTTTCACTGTCCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---------------------1.00------------------------------------------------------------------------
...........................................................................................................................................................................................TGTAAACACCCACTCTC.............................................................................................................................................................................................................................................................................................................................................................................171.000.00------------------------------------------------------1.00---------------------------------------
...........................................................................................................................................................................................TGTAAACACCCACTCTTCG...........................................................................................................................................................................................................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................GTTTGCCAGTTAGTTCTGATA......................................................................................................................................................................................................................................................211.000.00------------------------------------------1.00---------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................AGGACTGAAGGTGGCGCCTCA..........................................................................................................................................................................2111.004.00----------------------------------------------------------------1.00-----------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGCTTGGACCTTGACTGCAGCC.....................................................2611.001.00------------------------------------------------1.00---------------------------------------------
.................................................................................................................................................................................................................................................................................................................TGCCAGTTAGTTCTGTTA......................................................................................................................................................................................................................................................181.000.00-------------------------------1.00--------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................TTTGCCAGTTAGTTCTAATA......................................................................................................................................................................................................................................................201.000.00------------1.00---------------------------------------------------------------------------------
...........................................................................................................................................................................................TGTAAACACCCACTCTCAGC..........................................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------------------------1.00---------------------------------
................................................................................................................................................................................................................................AGGGAGAGAGAAAAGGATAAG....................................................................................................................................................................................................................................................................................................................................211.000.00---------------------------------------------------1.00------------------------------------------
..............................................AACAATATCCTTCTGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00----------1.00-----------------------------------------------------------------------------------
...........................................................................................................................................................................................TGTAAACACCCACTCTCTC...........................................................................................................................................................................................................................................................................................................................................................................191.000.00------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGACGAGGCTGGATGGTT...........................................................................................................221.000.00-----------1.00----------------------------------------------------------------------------------
.............................................................................GTTGTTGGCACAGCAAGGACAAAATTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00--------------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................GCCAGTTAGTTCTGGTA......................................................................................................................................................................................................................................................171.000.00-----------------------------1.00----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................GTCAGGACTGAAGGTGGCGCGTGGTGA.......................................................................................................................................................................2711.001.00----------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTGGAGAGCTGACTGGGGGAA...........................................................................................2511.001.00-------------------------------------------------------------------1.00--------------------------
...........................................................................................................................................................................................TGTAAACACCCACTCAGTC...........................................................................................................................................................................................................................................................................................................................................................................191.000.00------1.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................AGGACTGAAGGTGGCGCCTC...........................................................................................................................................................................2011.004.00-----1.00----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................GCAGGGCTTCCTGGACTCC...............................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------1.00------------------------------------
.....................................................................................................................................................................................................................................................................................................................AGTTAGTTCTGGGCATGCTTGT..............................................................................................................................................................................................................................................2211.001.00-----------------1.00----------------------------------------------------------------------------
....GTGGATGAAGAAGGTTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------------------------------------------1.00---------------------------
.................GTTTCACTGTCCGGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.001.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................TGCCAGTTAGTTCTGCTA......................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------1.00-------------------------
............AGAAGGTTTCACTGTTTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------1.00------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................CTGGTGGGACATGGTGTCAGGACTGAAGG....................................................................................................................................................................................2911.001.00----------1.00-----------------------------------------------------------------------------------
......................................................................GGGGGCAGTTGTTGGAACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------------------1.00--------------------------------------------------------
.........................................................................................................................................................................................................................................................AGGGCTTCCTGGAGGACGGC............................................................................................................................................................................................................................................................................................................201.000.00--------------------------------------------------------------1.00-------------------------------
................................................................................................................................................................................................................................AGGGAGAGAGAAAAGGTCTT.....................................................................................................................................................................................................................................................................................................................................201.000.00--------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................................................................CTTCCTGGAGGAGGGGGCACCAGTGTT.................................................................................................................................................................................................................................................................................................2711.001.00----------------------------------------------------1.00-----------------------------------------
...............................................................................................................................................................................................................................................................................................................TTTGCCAGTTAGTTCTTATC......................................................................................................................................................................................................................................................201.000.00------------------1.00---------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTGGCTTGGACTGT...............................................................181.000.00-----------------------------------------------------------------1.00----------------------------
............................................................................................................................................................................................................................................................................................................................................................................................GACTGAAGGTGGCGCGTG...........................................................................................................................................................................1811.001.00---------------------------------------------------------------1.00------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................GGACTGAAGGTGGCGCCT............................................................................................................................................................................181.000.00-----------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................................................TGTAAACACCCACTCTCTCA..........................................................................................................................................................................................................................................................................................................................................................................201.000.001.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATTGGAGAGCTGACTGGGGGAAAACTG......................................................................................311.000.00--------------------------------------------------------1.00-------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCTTGGACCTTGACTGCAGAA.....................................................251.000.00--------------1.00-------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGAGCAGGGAGGGTGAG.......................................................................................................................201.000.00---------------------------1.00------------------------------------------------------------------
.......................................................................................................................CCACCTTCAGCAGTCCTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------------------1.00--------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TTGCCAGTTAGTTCTGCTA......................................................................................................................................................................................................................................................1970.860.14---------0.14------------------------------------------------------------------------------0.14-0.140.140.140.14
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACCTTGACTGCAGCC.....................................................1820.500.50-----------------------------------------------------------------------------0.50----------------
................................................................................................................................................................................................................................................................................................................TTGCCAGTTAGTTCTGCTAC.....................................................................................................................................................................................................................................................2070.140.14---0.14------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TTGCCAGTTAGTTCTG.........................................................................................................................................................................................................................................................1670.140.14-----------------------------------------------------------------------------------------0.14----
...............................................................................................................................................................................................................................................................................................................TTTGCCAGTTAGTTC...........................................................................................................................................................................................................................................................1570.140.14-----------------------------------------------------------------------0.14----------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTGGGGGAAAGC........................................................................................1590.110.11----------0.11-----------------------------------------------------------------------------------

Antisense strand
AGAGGTGGATGAAGAAGGTTTCACTGTCCGGCCTGATGTGACCCAGAACAATATCCTTCTGGCACCCCCTGGGGGCAGTTGTTGGCACAGCAAGGACAAAATTCTCCGTAATAACCAGTCCACCTTCAGCAGTCCTCTCTGTGTACATCCTGGAGAGAGTCTCCTTTGTGGATGAAGCCAACCTAAATGTAAACACCCACTCTATGGGGTCAGCACTGGGCAAGAGGGAGAGAGAAAAGGAGATCTAGCAGGGCTTCCTGGAGGAGGGGGCACCAGTGTTGGGGTTTTGCAGCCGAATAGGAGTTTGCCAGTTAGTTCTGGGCATGCTTGTGCAAAGGCTTCTCGGGGGGGGTGGGAGTGCTGGTGGGACATGGTGTCAGGACTGAAGGTGGCGCGTGGTGAGCGATGGGATTGGGCAGGACCTCGAAGGGTTTGAGCAGGGAGGGACGAGGCTGGATTGGAGAGCTGACTGGGGGAAAGCTTGTGTTGGGATTGGCTTGGACCTTGACTGCAGCCCACGCACGGCCGAGCCCTCCCGTTTCTCGTCCAGCGACTCCGACTTCGACGAT
..................................................................................................................................................................................................................................((.....((((......(((((((((((..(((.....)))..)).))..))))))).))))....))........((.((((((......)))).)).))..................................................................................................................................................................................................................................................
............................................................................................................................................................................................................................221.......................................................................................................327................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR037937(GSM510475)
293cand2. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR029131(GSM416760)
MCF7. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
TAX577739(Rovira)
total RNA. (breast)
SRR029127(GSM416756)
A549. (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR343337SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191469(GSM715579)
117genomic small RNA (size selected RNA from . (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343336GSM532871(GSM532871)
G652N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR040009(GSM532894)
G727T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040038(GSM532923)
G531N. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
SRR029130(GSM416759)
DLD2. (cell line)
SRR189786SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR040024(GSM532909)
G613N. (cervix)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACTCCGACTTCAG.... 173.500.00--------0.50-------------0.50--0.500.50--------------------------------------------------------0.500.50-0.50-------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACTCCGACTTCAGT... 183.500.00-------------------1.00---0.50--------------1.00-----------------------------------0.50---0.50---------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACTCCGACTTCAGTA.. 192.000.00------1.00-----------------0.50-----------------------------------------------0.50---------------------
................................................................................................................................................................................................................................AGGGAGAGAGAAAAGGACAT..................................................................................................................................................................................................................................................................................................................................... 201.000.00----------------------------------------------------------------------1.00-----------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACTCCGACTTCGAG... 181.000.00----------------------------1.00-----------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................GGGGTGGGAGTGCTGGGGAC......................................................................................................................................................................................................... 201.000.00-------------------------------------------------------1.00--------------------------------------
.............................................................................................................................................................................................................GGGGTCAGCACTGGGCA........................................................................................................................................................................................................................................................................................................................................................... 171.000.00---------------------------------------1.00------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................AGTTTGCCAGTTAGTTGATA........................................................................................................................................................................................................................................................ 201.000.00-----------------1.00----------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................GGGGGGGGTGGGAGTAG................................................................................................................................................................................................................ 171.000.00-------------------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGGCCGAGCCCTATC................................ 181.000.00----------------------------------------1.00-----------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCGGAGTCGCT...... 1520.500.50-------------------------------------------------------------------------------------0.50--------
................................................................................................ATTACGGAGAATTTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1620.500.50--------------------------------------------------------------------------------0.50-------------
.................GTTTCACTGTCCGGCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 180.500.00---------------------------0.25-----------------------------------------------------------0.25------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACTCCGACTTCA..... 160.500.00---------------------------------------------------------------------------------0.50------------
.................GCCGGACAGTGAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1540.500.50----------------------------------------------------------------------------------0.50-----------