ID: uc002mnm.2_intron_3_0_chr19_10363378_f.3p
GENE: (4)
chr19:10365065-10365314+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(7)
B-CELL 		(5)
BRAIN 		(1)
BREAST 		(13)
CELL-LINE 		(1)
FIBROBLAST 		(2)
HEART 		(4)
LIVER 		(1)
OTHER 		(6)
SKIN 		(1)
TESTES

Sense strand
ATCCAGGAGAAGAGTGTTTCAGGCAGAGGGAACAGCAAGTGCCAAGGCCCTGAGGCAGAATTTCAAGATGGGGTCAGTGAGGGGCAGAGGCAAATCGCCCAGGGCCCTGGAGGCAGAAGGGAGAATCCTGGGTTTTCCTATAGTGGGGTGGGAGCGTTTGAAGCAGAGTTGGGCTTCTCATGTGTCCTTCCTCCCCGCAGGCTGGACATACTGCACCAGGTTGCTATGTGGCAGAAGAACTTCAAGAGAA
..............................................................................................................................................((((((.((((((((..(((((........)))))..)))....))))).))))))....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................................................................................AGTGGGGTGGGAGCGTTTGAAG.......................................................................................22120.0020.003.00-8.006.00--------1.00---1.00----------1.00----------------
...............................................................................................................................................................................TCTCATGTGTCCTTCCTCCCCGCAGA.................................................267.000.004.00----2.00------------------1.00-------------------
............................................................................................................................................TAGTGGGGTGGGAGCGTTTGAAG.......................................................................................2315.005.005.00-------------------------------------------
...............................................................................................................................................................................TCTCATGTGTCCTTCCTCCCCGC....................................................2313.003.00-------------------1.00----------1.00---1.00---------
..................................................................................................................................................................................................................................TGTGGCAGAAGAACTTCA......1812.002.00--------1.00----------------------1.00------------
................................................................................................................................................................................................................................TATGTGGCAGAAGAACTT........1812.002.00----1.00-------------------------------1.00-------
...............................................................................................................................................................................TCTCATGTGTCCTTCCTCCCCGCA...................................................2412.002.00---------------------------------1.00-------1.00--
......................................................................................................GGCCCTGGAGGCAGAAGGGAGAATCCT.........................................................................................................................2712.002.00-----2.00--------------------------------------
.............................................................................................................................................................................................................ACATACTGCACCAGGTTG...........................1812.002.002.00-------------------------------------------
....................................................................................................................................................................................................................................TGGCAGAAGAACTTCAAGA...1912.002.00------2.00-------------------------------------
...............................................................................................................................................................................................................................CTATGTGGCAGAAGAACTT........1912.002.00----2.00---------------------------------------
..........................................................................................................................................................................................................................GGTTGCTATGTGGCAGAAGAACTT........2411.001.00--------------------------------1.00-----------
..............................................................................................................................................................................................................................GCTATGTGGCAGAAGAACTTCA......2211.001.00-------------------------1.00------------------
....................................................................................................................................................................................................................................TGGCAGAAGAACTTCAAG....1811.001.00----1.00---------------------------------------
..............................................................................................................................................GTGGGGTGGGAGCGTTAATG........................................................................................201.000.00-----------1.00--------------------------------
..............................................................................................................................................................................................................................GCTATGTGGCAGAAGAACTTC.......2111.001.00-1.00------------------------------------------
................................................................................................................................................................AAGCAGAGTTGGGCTTCTCA......................................................................2011.001.00----------------------1.00---------------------
................................................................................................................................................................................................................................TATGTGGCAGAAGAACT.........1711.001.00-------------------------------------1.00------
....................................................................................................................................................................................................................GCACCAGGTTGCTATGTGGCAGAAGAA...........2711.001.00-1.00------------------------------------------
.............................................................................................................GAGGCAGAAGGGAGAATAGCT........................................................................................................................211.000.00--------------------1.00-----------------------
...........GAGTGTTTCAGGCAGAGGGCATG........................................................................................................................................................................................................................231.000.00----------1.00---------------------------------
...............................................................................................................................................................................................................................CTATGTGGCAGAAGAACT.........1811.001.00---------------------1.00----------------------
..........................................................................................................................................................................................................................GGTTGCTATGTGGCAGAAGA............2011.001.00-1.00------------------------------------------
....................................................................................................................................................................................................................................TGGCAGAAGAACTTCAAGAA..2011.002.00-----------------------1.00--------------------
..........................................................................................................................................................................................................................GGTTGCTATGTGGCAGAAGAACTTCA......2611.001.00--------1.00-----------------------------------
........................................................................................................................................................................................................................................AGAAGAACTTCAAGAGAA1811.001.00------1.00-------------------------------------
............................................................................................................................................................................................................................TTGCTATGTGGCAGAAGAACTTCAAG....2611.001.00-1.00------------------------------------------
....................................................................................................................................................................................................................GCACCAGGTTGCTATGTGGCAGAA..............2411.001.00-------1.00------------------------------------
.................................................................................................................................................................................................................................ATGTGGCAGAAGAACTTT.......1821.001.00----1.00---------------------------------------
..............................................................................................................AGGCAGAAGGGAGAATGGCA........................................................................................................................201.000.00----------1.00---------------------------------
.............................................................................................................................................................................................................................TGCTATGTGGCAGAAGAACTTCAAGT...261.000.00-----------------------------1.00--------------
.........................................................................................................................................................................................................................AGGTTGCTATGTGGCAGAAGAA...........2211.001.00-------1.00------------------------------------
.............................................................................................................................................................................................................................TGCTATGTGGCAGAAGTT...........181.000.00---------------------------------------1.00----
..............................................................................................................................................................................................................................GCTATGTGGCAGAAGAACTT........2011.001.00--------------------------------------1.00-----
.................................................................................................................................................................................................................................ATGTGGCAGAAGAACTTCAAG....2111.001.00----------------------------------------1.00---
.........................................................................................................................................................................................................................AGGTTGCTATGTGGCAGAAGAACTTCAA.....2811.001.00-1.00------------------------------------------
....................................................................................................................................................TGGGAGCGTTTGAAGTTTG...................................................................................191.000.00-----------1.00--------------------------------
...............................................................................................................................................................................TCTCATGTGTCCTTCCTCCCCGCAGT.................................................261.000.00---------------1.00----------------------------
................................................................................................GCCCAGGGCCCTGGAGGAGT......................................................................................................................................201.000.00---------1.00----------------------------------
......................................................................................................................................................................................................AGGCTGGACATACTGCACCAGGG.............................231.000.00----1.00---------------------------------------
....................................................................................................................................................................................................................GCACCAGGTTGCTATGTGGCAGAAG.............2511.001.00-1.00------------------------------------------
...............................................................................................................................................................................TCTCATGTGTCCTTCCTCCCCGCT...................................................2411.003.00-----------------1.00--------------------------
.....................................................................................................................................................................................................................CACCAGGTTGCTATGTGGCAGAAGA............2511.001.00-1.00------------------------------------------
..............................................................................................................................................................................................................................GCTATGTGGCAGAAGAAC..........1811.001.00-1.00------------------------------------------
.................................................................................................................................................................................................................................ATGTGGCAGAAGAACTT........1721.001.00----------------------------1.00---------------
................................................................................................................................................................................................................................TATGTGGCAGAAGAACTTCAAGA...2311.001.00------------------1.00-------------------------
...............................................................................................................................................................................TCTCATGTGTCCTTCCTCCCCA.....................................................221.000.00-------------1.00------------------------------
.....................................................................................................................................................................................................................CACCAGGTTGCTATGTGGCAGAAG.............2411.001.00-----------------------------------1.00--------
.........................................................................................................................................................................................................................AGGTTGCTATGTGGCAGAAGA............2111.001.00-1.00------------------------------------------
...............................................................................................................................................................................TCTCATGTGTCCTTCCTCCCCG.....................................................2211.001.00--------------1.00-----------------------------
..........................................................................................................................................................................................................................GGTTGCTATGTGGCAGAA..............1811.001.00-------1.00------------------------------------
............................................................................................................................................TAGTGGGGTGGGAGCGTTTGAAGCAGAGTTGGGCT...........................................................................3511.001.001.00-------------------------------------------
......................................................................................................................................................................................................AGGCTGGACATACTGCACC.................................1911.001.00-1.00------------------------------------------
.......................................................................................................................................................................................................................................CAGAAGAACTTCAAGA...1660.330.33------------------------------------------0.33-

Antisense strand
ATCCAGGAGAAGAGTGTTTCAGGCAGAGGGAACAGCAAGTGCCAAGGCCCTGAGGCAGAATTTCAAGATGGGGTCAGTGAGGGGCAGAGGCAAATCGCCCAGGGCCCTGGAGGCAGAAGGGAGAATCCTGGGTTTTCCTATAGTGGGGTGGGAGCGTTTGAAGCAGAGTTGGGCTTCTCATGTGTCCTTCCTCCCCGCAGGCTGGACATACTGCACCAGGTTGCTATGTGGCAGAAGAACTTCAAGAGAA
..............................................................................................................................................((((((.((((((((..(((((........)))))..)))....))))).))))))....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.........................................................................................................................AGAATCCTGGGTTTTACA............................................................................................................... 181.000.00------------1.00-------------------------------
........................................................................................................................................................................TTGGGCTTCTCATGTGCTG............................................................... 191.000.00---------1.00----------------------------------
..........................................................................................................................................................................................CTTCCTCCCCGCAGGCTTG............................................. 191.000.00--------------------------1.00-----------------
................................................................................................CCTCCAGGGCCCTGGGC......................................................................................................................................... 1790.110.11-------------------------------------------0.11