ID: uc002mff.1_intron_1_0_chr19_6501409_r
GENE: TUBB4A(1)
chr19:6501359-6501575-


(2)
B-CELL 		(12)
BRAIN 		(6)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(2)
LIVER 		(2)
OTHER 		(6)
SKIN 		(1)
TESTES

Sense strand
CAGTGACCTGCAACTGGAGAGGATCAACGTGTACTACAACGAGGCCACAGGTAGGGCGAAGGAGGCACCTTCCAGGTGGGAAGGGGCAGCTGGGAGGGAACAGGATGCTACCGGGCGCCTGTGGTTCCTGGCACGCATCGAACTGCCCTCCATCTGTTTCCCTGCAGGAGGAAATTATGTCCCCAGAGCGGTGCTGGTGGACCTGGAACCCGGCACC
............................................................((.((((((((((((.((........)).))))))))........)))).)).........................................................................................................
..................................................51............................................................113......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
..................................................GTAGGGCGAAGGAGGCAC.....................................................................................................................................................18113.0013.007.00-2.003.00-----------1.00-------------------
..................................................GTAGGGCGAAGGAGGCACC....................................................................................................................................................1918.008.00--3.003.00-------1.00--1.00--------------------
..................................................GTAGGGCGAAGGAGGCA......................................................................................................................................................1726.506.501.000.500.500.50-0.50-0.500.50--0.50-1.001.00--------------------
..................................................GTAGGGCGAAGGAGGCACCTTC.................................................................................................................................................2214.004.00--1.00--3.00-----------------------------
..................................................GTAGGGCGAAGGAGGCACCTT..................................................................................................................................................2114.004.002.001.00------------------------1.00--------
..................................................GTAGGGCGAAGGAGGCACCT...................................................................................................................................................2013.003.00--3.00--------------------------------
..................................................GTAGGGCGAAGGAGGCACCTTCCAGG.............................................................................................................................................2612.002.002.00----------------------------------
...........................................................................................GGGAGGGAACAGGATTTT............................................................................................................182.000.00---------2.00-------------------------
..................................................GTAGGGCGAAGGAGGCACCTTCCA...............................................................................................................................................2412.002.00--1.00--------1.00-----------------------
...................................................................................................................................................................................................GGTGGACCTGGAACCCGGCA..2012.002.00-1.00-----------------------1.00---------
..................................................GTAGGGCGAAGGAGGCACCTTCC................................................................................................................................................2312.002.001.00--1.00-------------------------------
..................................................................................................................................................................................................TGGTGGACCTGGAACCCGGC...2012.002.00--------2.00--------------------------
.......................................................................................................................................................................................CAGAGCGGTGCTGGTGGACC..............2021.501.50-0.50------0.50-----------------------0.50--
..................................................GTAGGGCGAAGGAGGCACCTTCCAGGTGGG.........................................................................................................................................3011.001.001.00----------------------------------
...............................................................................................................CGGGCGCCTGTGGTTCCTGGC.....................................................................................2111.001.00------------------------1.00----------
..........CAACTGGAGAGGATCAACGTGTACTACA...................................................................................................................................................................................2811.001.00------1.00----------------------------
...............................................................................................................CGGGCGCCTGTGGTTCCGGCT.....................................................................................211.000.00-------------1.00---------------------
................................................................................................................................................................................................GCTGGTGGACCTGGACGG.......181.000.00----1.00------------------------------
......CCTGCAACTGGAGAGGATCAACG............................................................................................................................................................................................2311.001.00----------1.00------------------------
..................................................GTAGGGCGAAGGAGGCACCTTCCAGGTGG..........................................................................................................................................2911.001.001.00----------------------------------
........TGCAACTGGAGAGGATCAACGCG..........................................................................................................................................................................................2311.001.00-----1.00-----------------------------
......................................................................................................................CTGTGGTTCCTGGCACGCATCG.............................................................................2211.001.00-1.00---------------------------------
........................................................................................................................................................................................AGAGCGGTGCTGGTGGACC..............1921.001.00-------1.00---------------------------
.................................................................................................................GGCGCCTGTGGTTCCTGGCAC...................................................................................2111.001.001.00----------------------------------
...........................................GCCACAGGTAGGGCGAAGCGGC........................................................................................................................................................221.000.00------------1.00----------------------
...................................................................................................................................................................................................GGTGGACCTGGAACCCGGC...1911.001.00-1.00---------------------------------
........TGCAACTGGAGAGGATCAACG............................................................................................................................................................................................2111.001.00----------1.00------------------------
........................CAACGTGTACTACAACGAGGCCACAGG......................................................................................................................................................................2711.001.00--------------------1.00--------------
.........................................................................................................................TGGTTCCTGGCACGCATCGAG...........................................................................211.000.001.00----------------------------------
.....................................................................................GCAGCTGGGAGGGAACAGGATGCTACCGGGCG....................................................................................................3211.001.001.00----------------------------------
...................................................................CCTTCCAGGTGGGAAGGGGCAGCTG.............................................................................................................................2511.001.001.00----------------------------------
.................................................................................................................................................................................................CTGGTGGACCTGGAACCCGGC...2111.001.00-1.00---------------------------------
..................................................GTAGGGCGAAGGAGGCACCTTAC................................................................................................................................................2311.004.00-----1.00-----------------------------
...................................................................................................................................................................................................GGTGGACCTGGAACCCGGCAC.2111.001.00-1.00---------------------------------
.......................................................................................................................................................................................CAGAGCGGTGCTGGTGGACCTGG...........2321.001.00-1.00---------------------------------
.......................................................................................AGCTGGGAGGGAACAAAA................................................................................................................181.000.00----------------------1.00------------
...............................................................................GAAGGGGCAGCTGGGAGGGA......................................................................................................................2011.001.00-1.00---------------------------------
........................................................................................................................GTGGTTCCTGGCACGCATCGA............................................................................2111.001.001.00----------------------------------
.......................................................................................................................................................................................CAGAGCGGTGCTGGTGGAC...............1921.001.000.500.50---------------------------------
................................................................................................................GGGCGCCTGTGGTTCCTGGCACGCAT...............................................................................2611.001.00-------1.00---------------------------
..................GAGGATCAACGTGTACTACAACGAGGCCACAG.......................................................................................................................................................................3211.001.00-1.00---------------------------------
................................................................................................................................................................................................GCTGGTGGACCTGGAACCCGGCA..2311.001.00----------------1.00------------------
.....................................................................................................................CCTGTGGTTCCTGGCACGCATCGA............................................................................2411.001.001.00----------------------------------
..................................................GTAGGGCGAAGGAGGCACCTTCCAG..............................................................................................................................................2511.001.00-----------------1.00-----------------
.............CTGGAGAGGATCAACGTGTACTACA...................................................................................................................................................................................2511.001.00------1.00----------------------------
..................................................GTAGGGCGAAGGAGGCACCTTCCAGGTGGGA........................................................................................................................................3111.001.001.00----------------------------------
..................................................................................................................................................................................................TGGTGGACCTGGAACCCGGCACC2311.001.00-1.00---------------------------------
....................................................................................................................................................................................................GTGGACCTGGAACCCGGC...1811.001.00-1.00---------------------------------
................................................................................................................................................................................................GCTGGTGGACCTGGAACCCGG....2111.001.00------------------1.00----------------
.......CTGCAACTGGAGAGGATCAACGTGTACTACA...................................................................................................................................................................................3111.001.00------1.00----------------------------
...........................................................................................GGGAGGGAACAGGATGTT............................................................................................................181.000.00---------1.00-------------------------
....................................................................................................................GCCTGTGGTTCCTGGCACGCATCGA............................................................................2511.001.001.00----------------------------------
.......................................................................................................................................................................................CAGAGCGGTGCTGGTGGA................1821.001.000.500.50---------------------------------
..................................................GTAGGGCGAAGGAGGAAC.....................................................................................................................................................181.000.00---------------1.00-------------------
.......CTGCAACTGGAGAGGATCAACGTGT.........................................................................................................................................................................................2511.001.00-------------------1.00---------------
............................................................................................................................................AACTGCCCTCCATCTGCACC.........................................................201.000.00-----------------------1.00-----------
........................................................................................................................GTGGTTCCTGGCACGCATCGAA...........................................................................2211.001.001.00----------------------------------
.......................................................................................................................................................................................CAGAGCGGTGCTGGTGG.................1720.500.50-------0.50---------------------------
..............................................................................GGAAGGGGCAGCTGGGAG.........................................................................................................................1820.500.50------------------------------0.50----
.......................................................................................................................................................................................CAGAGCGGTGCTGGTGGACCTG............2220.500.50-0.50---------------------------------
.............................................................................................................................................................................................GGTGCTGGTGGACCTGGAAC........2020.500.50-------------------------------0.50---
........................................................................................................................................................................................AGAGCGGTGCTGGTGGAC...............1820.500.50-----------------------------0.50-----
........................................................................................................................................................................................AGAGCGGTGCTGGTGGA................1720.500.50-0.50---------------------------------
..................................................GTAGGGCGAAGGAGGCATTT...................................................................................................................................................2020.506.50----------------------------0.50------
..................................................GTAGGGCGAAGGAGGC.......................................................................................................................................................1620.500.500.50----------------------------------
....................................................................................................................................................................................CCCCAGAGCGGTGCTGGTGGACCTGGAAC........2920.500.500.50----------------------------------
.................................................................................................................................................................................................CTGGTGGACCTGGAACCCG.....1920.500.50------0.50----------------------------
...................AGGATCAACGTGTACTACAA..................................................................................................................................................................................2020.500.50----------------0.50------------------
.........................................................................................................................................................................................GAGCGGTGCTGGTGGACCTG............2020.500.50-0.50---------------------------------
......................................................................................................................................................................................CCAGAGCGGTGCTGGTGGACC..............2120.500.50------0.50----------------------------
..................................................GTAGGGCGAAGGAGGCC......................................................................................................................................................1720.500.50-----0.50-----------------------------
......................................................................................................................................................................................CCAGAGCGGTGCTGGTGGAC...............2020.500.50------0.50----------------------------
...........................................................................................................................................................................................GCGGTGCTGGTGGACCTGGAACCC......2420.500.50-0.50---------------------------------
..................................................GTAGGGCGAAGGAGGCATCT...................................................................................................................................................2020.506.50-----0.50-----------------------------
..........................................................................................................................................................................................AGCGGTGCTGGTGGACCTG............1920.500.50-0.50---------------------------------
.....................................................................................................................................................................................................TGGACCTGGAACCCGGCA..1820.500.50---------------------------0.50-------
..................................................................................................................................................................................................TGGTGGACCTGGAAC........1590.330.33-0.11-----0.11--------------------------0.11
...................................................................................................................................................................................................GGTGGACCTGGAACCCGG....1830.330.33-0.33---------------------------------
...................................................................................................................................................................................................GGTGGACCTGGAACCCG.....1730.330.330.33----------------------------------
...........................CGTGTACTACAACGAGGC............................................................................................................................................................................1840.250.25---------------------------------0.25-
..........................ACGTGTACTACAACGAGGC............................................................................................................................................................................1940.250.25-------0.25---------------------------
..............................................................................................................................................................................................GTGCTGGTGGACCTGGA..........1750.200.20-------0.20---------------------------

Antisense strand
CAGTGACCTGCAACTGGAGAGGATCAACGTGTACTACAACGAGGCCACAGGTAGGGCGAAGGAGGCACCTTCCAGGTGGGAAGGGGCAGCTGGGAGGGAACAGGATGCTACCGGGCGCCTGTGGTTCCTGGCACGCATCGAACTGCCCTCCATCTGTTTCCCTGCAGGAGGAAATTATGTCCCCAGAGCGGTGCTGGTGGACCTGGAACCCGGCACC
............................................................((.((((((((((((.((........)).))))))))........)))).)).........................................................................................................
..................................................51............................................................113......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
................................................................................................................................................AGGGAAACAGATGGAGGGC...................................................... 1915.005.00----5.00------------------------------
..................................................................................................................................................................................GTCCCCAGAGCGGTGG....................... 161.000.00---------------------1.00-------------
............................................................................................................................................AACTGCCCTCCATCTTTTT.......................................................... 191.000.00----------1.00------------------------
....................................................................................................................................................................CAGGAGGAAATTATGTGTAG................................. 201.000.00------------1.00----------------------
....................................................................................................................................................TCCATCTGTTTCCCTTGGC.................................................. 191.000.00----1.00------------------------------