ID: uc002lbm.2_intron_35_0_chr18_43523278_r.5p
GENE: (8)
chr18:43523771-43524020-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(1)
AGO3.ip
(9)
B-CELL
(4)
BRAIN
(4)
BREAST
(31)
CELL-LINE
(2)
CERVIX
(5)
HEART
(5)
HELA
(2)
LIVER
(1)
OTHER
(1)
OTHER.ip
(15)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
GTTCCCCTTTCATGAACTCTTTCAGCATCTTCTTGGGTTTAAAGCAAAAGGTAGACTCATTTCTCTTAAGTGTAAAATGTGGTAGTGGCAAGTGTAAACACAGGAACTCTGCATTGAGTCTTCTTTTTTTTTTTGAGATGGAGTCTTGCTGTGTCGCCCAGGCCTGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTG
.............................................................................................................................................((.(((((.(((..(((.(((.....((((....))))..))).))).))).)))))))..................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................................................................................................CGCGATCTCGGCTCACTGCAAGAA..................................................2437.000.00-10.001.00-5.002.00-3.001.00-----5.00-1.002.00----2.00--2.00--2.00-1.00------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCAAGA...................................................2320.000.00--10.00-4.001.002.001.001.00----------------------------------------------------------1.00-----------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCAT.....................................................2217.000.00--7.00--4.001.001.003.00------------------1.00---------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCAAGT...................................................237.000.00--4.00-1.00--1.001.00----------------------------------------------------------------------------
........................................................................................................................................................................TGCAGTGGCGCGATCTCGGCTAT...........................................................237.000.00-3.001.00---------------------2.00--------------------------------------------------------1.00---
...............ACTCTTTCAGCATCTTCTTGGGT....................................................................................................................................................................................................................2316.006.00-----------6.00-------------------------------------------------------------------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCAAGAA..................................................256.000.00-4.00---------------1.00-------------1.00-----------------------------------------------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCATAA...................................................245.000.00-3.00------------------------1.00-------------------------------------1.00--------------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCATAAT..................................................253.000.00-3.00-----------------------------------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCAAGAGAA................................................262.000.00--------------------------------2.00----------------------------------------------------
.................................................................................................................................................................................GCGATCTCGGCTCACTGCAAGT...................................................222.000.00--2.00----------------------------------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCAAGAAA.................................................252.000.00-2.00-----------------------------------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCAAGAAT.................................................252.000.00-2.00-----------------------------------------------------------------------------------
........................................................................................................................................................................TGCAGTGGCGCGATCTCGGCTAGA..........................................................242.000.00---------------1.00-----------------------------1.00---------------------------------------
..............................................AAAGGTAGACTCATTTCTCTTAAGT...................................................................................................................................................................................2512.002.00---------------------------------2.00---------------------------------------------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCAAGAT..................................................252.000.00----1.001.00-------------------------------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCAAGAAG.................................................252.000.00----1.00--1.00-----------------------------------------------------------------------------
.......................................................................................................................................................TGTCGCCCAGGCCTGAGTGCAGTGGTACG......................................................................292.000.002.00------------------------------------------------------------------------------------
....CCCTTTCATGAACTCTTTCT..................................................................................................................................................................................................................................202.000.00-----------------------2.00-------------------------------------------------------------
..............................................................................................................................................................................................ACTGCAAGCTCTGCCTCCCAGTCGC...................................252.000.00---2.00---------------------------------------------------------------------------------
...........................................................................................................................................................................................................CCTCCCAGGTTCACGCCATTCTCCTTTTC..................292.000.00----------------2.00--------------------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCAAGTT..................................................242.000.00-----1.00-------------------------------------------------------1.00-----------------------
................CTCTTTCAGCATCTTCTTGGGTTTAAA...............................................................................................................................................................................................................2711.001.00-------------1.00-----------------------------------------------------------------------
.................................................................................................................................................TTGCTGTGTCGCCCAGGCAGAG...................................................................................2201.001.00---1.00---------------------------------------------------------------------------------
........................................................................................................................................................................TGCAGTGGCGCGATCTCGGCTAGAA.........................................................251.000.00-----------------------------------1.00-------------------------------------------------
........................................................................................................................................................................................CGGCTCACTGCAAGCTCGGC..............................................201.000.00-------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................GATCTCGGCTCACTGCAAGCTAAGT..............................................251.000.00-1.00-----------------------------------------------------------------------------------
.................................................................................................................TTGAGTCTTCTTTTTTTTTTAGG..................................................................................................................231.000.00---1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCAAGT...................................................241.000.00-----1.00-------------------------------------------------------------------------------
..............................................................................................................................................GTCTTGCTGTGTCGCTAA..........................................................................................181.000.00------------------------------------------1.00------------------------------------------
....................................................................................................................AGTCTTCTTTTTTTTTTGCC..................................................................................................................201.000.001.00------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................ACGCCATTCTCCTGCCTCAGCCTCCCGACC.....301.000.001.00------------------------------------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCAT.....................................................211.000.00--1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................GCAGTGGCGCGATCTCGGCTAAAG.........................................................241.000.00-------------1.00-----------------------------------------------------------------------
.............................................................................................................................................AGTCTTGCTGTGTCGCCCAGGCCGGTC..................................................................................271.000.001.00------------------------------------------------------------------------------------
.........................................................................................................................................................................GCAGTGGCGCGATCTCGGCTCAAAT........................................................251.000.00------------------1.00------------------------------------------------------------------
....................................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCT................221.000.00------1.00------------------------------------------------------------------------------
..............................................................................................................................................................................................ACTGCAAGCTCTGCCTCCCATGCC....................................241.000.00---1.00---------------------------------------------------------------------------------
............................................................................................TGTAAACACAGGAACTCTGCAT........................................................................................................................................2211.001.00--------------------------------------------------------------1.00----------------------
.........................................................................................................................................................................GCAGTGGCGCGATCTCGGCTAGA..........................................................231.000.00------------------------------------------------------------1.00------------------------
................................................................................................................ATTGAGTCTTCTTTTTTTTTTAGGT.................................................................................................................251.000.00---1.00---------------------------------------------------------------------------------
....................................................................................................................................TTGAGATGGAGTCTTGCTGGGC................................................................................................221.000.001.00------------------------------------------------------------------------------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCAAGCTCTGAAC............................................311.000.00-----------------------------------------------------------------------------------1.00-
...........................................................................................................................................................................................................CCTCCCAGGTTCACGCCATTCTCCCCA....................271.000.00----------------------------------------------------------------------1.00--------------
...................................................................................................................................TTTGAGATGGAGTCTTGCTGAGCC...............................................................................................241.000.00--------------------1.00----------------------------------------------------------------
.....................................................................................................................................................................................TCTCGGCTCACTGCAAGCTAAA...............................................221.000.00--------------------------------------------------------1.00----------------------------
......................................................................................................................TCTTCTTTTTTTTTTTGAGATGGTG...........................................................................................................251.000.001.00------------------------------------------------------------------------------------
.......................................................................................................................................................................GTGCAGTGGCGCGATCTCGGCTCACTCC.......................................................281.000.00-----1.00-------------------------------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCATAGA..................................................241.000.00------------------------------1.00------------------------------------------------------
....................................................................................................................AGTCTTCTTTTTTTTTTTGAGAGGG.............................................................................................................251.000.001.00------------------------------------------------------------------------------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCAAGAGA.................................................261.000.00---------------------------------------------------------------------1.00---------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCATAAA..................................................251.000.00--------------------------1.00----------------------------------------------------------
.................................................................................................................................................TTGCTGTGTCGCCCAGGC.......................................................................................1801.001.00--------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................ATCTCGGCTCACTGCAAGCTCTGCCTCCACG.......................................311.000.001.00------------------------------------------------------------------------------------
.........................................................................................................................................................TCGCCCAGGCCTGAGTGCAGTGGCCCG......................................................................271.000.00---1.00---------------------------------------------------------------------------------
....................................................................................................................AGTCTTCTTTTTTTTTTTGAGACGG.............................................................................................................251.000.00---1.00---------------------------------------------------------------------------------
....................................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCTAA..............241.000.00---------1.00---------------------------------------------------------------------------
.....................................................................................................................................TGAGATGGAGTCTTGCTGGGC................................................................................................211.000.00---------------------1.00---------------------------------------------------------------
.................................................................................................................................................TTGCTGTGTCGCCCAGGCCGGAC..................................................................................231.000.001.00------------------------------------------------------------------------------------
........................................................................................................................TTCTTTTTTTTTTTGATCT...............................................................................................................191.000.00-----------------------------------------------------------------------------1.00-------
....................................................................................................................AGTCTTCTTTTTTTTTGGCC..................................................................................................................201.000.001.00------------------------------------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCATTTT..................................................241.000.00------------------1.00------------------------------------------------------------------
....................................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTAAA...............231.000.00---------------------1.00---------------------------------------------------------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCATAT...................................................241.000.00-------1.00-----------------------------------------------------------------------------
...CCCCTTTCATGAACTCTTTCAGC................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------1.00-----------------------------
...............................................................................................................................................................AGGCCTGAGTGCAGTGGCGCGATCGCG................................................................271.000.001.00------------------------------------------------------------------------------------
................................................................................................................................................................................CGCGATCTCGGCTCACTGCATTA...................................................231.000.00--1.00----------------------------------------------------------------------------------
...........................................................................................................................................................................AGTGGCGCGATCTCGGCTCAAATA.......................................................241.000.00-----------------------------------------------------1.00-------------------------------
......................................................................................................................................................................AGTGCAGTGGCGCGATCTCGGCTCACTGGCTC....................................................321.000.001.00------------------------------------------------------------------------------------
.......................................................................................................................................................TGTCGCCCAGGCCTGAGTGCAGTGGGG........................................................................271.000.001.00------------------------------------------------------------------------------------
.........................................................................................................................................................TCGCCCAGGCCTGAGTGCAGTGGTGTG......................................................................271.000.001.00------------------------------------------------------------------------------------
...........................................................................................................................................................................AGTGGCGCGATCTCGGCTCAATT........................................................231.000.00------------------------------------------------------------------------------1.00------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGCAAGAAG.................................................261.000.00----1.00--------------------------------------------------------------------------------
.........................................................................................................................................ATGGAGTCTTGCTGTGTCGCAT...........................................................................................221.000.00--------------------1.00----------------------------------------------------------------
..................................GGGTTTAAAGCAAAAGGT......................................................................................................................................................................................................1811.001.00----------------------------------1.00--------------------------------------------------
................................................................................................................................................................GGCCTGAGTGCAGTGTGAA.......................................................................191.000.00--------------------------------------------------------------------------------1.00----
.......................................................................................................................................................................................TCGGCTCACTGCAAGCTCTGCCTCCCAGGGCC...................................321.000.00---1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................GCGCGATCTCGGCTCACTGGGGC....................................................231.000.00---------------------------1.00---------------------------------------------------------
............................................................................................................................................GAGTCTTGCTGTGTCGCCCAGGCGGAG...................................................................................271.000.001.00------------------------------------------------------------------------------------
............................................................................................................................................................CCCAGGCCTGAGTGCAGTGGCGCG......................................................................2440.250.250.25------------------------------------------------------------------------------------
......................................................ACTCATTTCTCTTAAG....................................................................................................................................................................................1660.170.17------------------------------------------------------------------------------------0.17

Antisense strand
GTTCCCCTTTCATGAACTCTTTCAGCATCTTCTTGGGTTTAAAGCAAAAGGTAGACTCATTTCTCTTAAGTGTAAAATGTGGTAGTGGCAAGTGTAAACACAGGAACTCTGCATTGAGTCTTCTTTTTTTTTTTGAGATGGAGTCTTGCTGTGTCGCCCAGGCCTGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTG
.............................................................................................................................................((.(((((.(((..(((.(((.....((((....))))..))).))).))).)))))))..................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACTG............................... 2313.000.00------------4.003.00------------------------1.00-------1.00----------------1.00-1.00----------1.00--1.00-----
.........................................................................................................................................................................................................TGCCTCCCAGGTTCACGCCATTTC......................... 247.000.00----------7.00--------------------------------------------------------------------------
.........................................................................AAAATGTGGTAGTGGCAAGTG............................................................................................................................................................ 214.000.00---------4.00---------------------------------------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTGTAG................................ 223.000.00---3.00---------------------------------------------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCACTC.......................... 282.000.001.00--1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................GCTCTGCCTCCCAGGTTCACGG............................... 222.000.00---2.00---------------------------------------------------------------------------------
..............................................................................................................................................................................GGCGCGATCTCGGCTCACTGTA...................................................... 222.000.00---------------2.00---------------------------------------------------------------------
.................................................................................................................................................................................................GCAAGCTCTGCCTCCCAGGTTCACAG............................... 262.000.00---2.00---------------------------------------------------------------------------------
.........................................................................................................................................................................................GGCTCACTGCAAGCTCTGCCTCCCAGGTTCG.................................. 312.000.002.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTCTG.................................. 202.000.00------------1.00------------------------------------1.00-----------------------------------
.....................................................................................................................................ACAGCAAGACTCCATCTCA.................................................................................................. 1902.002.00-------------------2.00-----------------------------------------------------------------
.....................................................................................................................................................................................................AGGAGAATGGCGTGAACCTGGGAGGCAGAGC...................... 3102.002.00------2.00------------------------------------------------------------------------------
..................................................................................................................................................................................CGATCTCGGCTCACTGCAAGAAAA................................................ 241.000.00--------------------------------------------------1.00----------------------------------
...............................................................................................................................................TCTTGCTGTGTCGCCCAGGCC...................................................................................... 211.000.00----------------------------------------------------------1.00--------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTCAA.................................. 201.000.00-------------------------------------1.00-----------------------------------------------
.................................................................TTAAGTGTAAAATGTGTG....................................................................................................................................................................... 181.000.00---------------------------------------------------------1.00---------------------------
.........................................................................................................................................................................................................TGCCTCCCAGGTTCACGCCATTTTAA....................... 261.000.00------------------------------------------------------------------------1.00------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCCTG................................ 221.000.00------------1.00------------------------------------------------------------------------
.............................................................................................................................................................................................CACTGCAAGCTCTGCCTCCCAGGTTCT.................................. 271.000.00--------------------------------------------------------------------1.00----------------
.................................................................................................................................................................................................................AGGTTCACGCCATTCTCCTGTA................... 221.000.00-----------------------------1.00-------------------------------------------------------
............................................................................................................................................................................................................CTCCCAGGTTCACGCCATTCTCCTCAA................... 271.000.00-----------------------------------------------1.00-------------------------------------
.........................................................................................................................................................................................................TGCCTCCCAGGTTCACGCCATTTT......................... 241.000.00------------------------------------1.00------------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCAGC........................... 271.000.001.00------------------------------------------------------------------------------------
..............................................................................................................................................................................GGCGCGATCTCGGCTCACTTTGA..................................................... 231.000.00----------------------------------------1.00--------------------------------------------
.........................................................................AAAATGTGGTAGTGGCAAGCGCT.......................................................................................................................................................... 231.000.00---------1.00---------------------------------------------------------------------------
.....................................TTTAAAGCAAAAGGTGCAG.................................................................................................................................................................................................. 191.000.00---1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................TGGCGTGAACCTGGGAGGCAGAGCTTGC............................. 2801.001.00-----1.00-------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CCTGCCTCAGCCTCCCGAGTTTTT. 241.000.00----------------------------------------------------1.00--------------------------------
........................................................................................................................................GATGGAGTCTTGCTGTGTCTA............................................................................................. 211.000.00---1.00---------------------------------------------------------------------------------
...........................................................................................................................................GGAGTCTTGCTGTGTCGCCCACCC....................................................................................... 241.000.001.00------------------------------------------------------------------------------------
.....................................................................................................................................................................................................GCTCTGCCTCCCAGGTTCACGCCATCCGC........................ 291.000.001.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CCAGGTTCACGCCATTCTTTT...................... 211.000.00---------------------------------------1.00---------------------------------------------
......................................................................................................................................................................................................................CACGCCATTCTCCTGTAG.................. 181.000.00-----------------------------------------------------------------------1.00-------------
...................................................................................................................................................................................................AAGCTCTGCCTCCCAGGTTCACGCCACCT.......................... 291.000.00---1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................GCTCTGCCTCCCAGGTTCACGCCATTCTCAA...................... 311.000.00-------------------------------------------------------------------------1.00-----------
.....................................................................................................................................................................................................................TCACGCCATTCTCCTGCCTCAGCCCCAA......... 281.000.00-----------------------------------------------------------1.00-------------------------
......................................................................................................................................................................................................TGGCGTGAACCTGGGAGGCAGAG............................. 2301.001.00------1.00------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGCCTCCCAGGTTCACAGAA............................. 201.000.00--------------------------------------------------------------------------1.00----------
.......................................................................................................................................................................................................GGAGAATGGCGTGAACCTGGGAGGCAGA....................... 2801.001.00--------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCATGGAG........................ 301.000.00---1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................................CCAGGTTCACGCCATTCTTTTT..................... 221.000.00-----------------------------------------1.00-------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCAATAC.............................. 241.000.00---1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGTTCACGCCATTCTCCTCAA................... 221.000.00---------------------------------------------------------------------------1.00---------
.........................................................................................................................................................................................GTGAACCTGGGAGGCAGAGCTTGCAGTGAGCC................................. 3201.001.00------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCATTGCAG....................... 311.000.001.00------------------------------------------------------------------------------------
.....................................................................................................................................................................................................TGGCGTGAACCTGGGAGGCAGAGC............................. 2401.001.00------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................CTGCAAGCTCTGCCTCCCAGGTTGAG................................. 261.000.001.00------------------------------------------------------------------------------------
........................................................................................................................................................GTCGCCCAGGCCTGAGTGCAGCAT.......................................................................... 241.000.00---------1.00---------------------------------------------------------------------------
...............................................................................................................................................................................................CTGCAAGCTCTGCCTCCCAGGTTCAAGCC.............................. 291.000.001.00------------------------------------------------------------------------------------
..................................................................................................................................................................GCGCCACTGCACTCAGG....................................................................... 1701.001.00------------------------------------------------------1.00------------------------------
.......................................................................................................................................................................................................TCTGCCTCCCAGGTTCACGCCATCTTG........................ 271.000.001.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTACGG................................ 221.000.00---1.00---------------------------------------------------------------------------------
...........................................................................................................................................................................................................................CATTCTCCTGCCTCAGCCTCCCGAGTATCGG 311.000.00------------------------------------------------------------------1.00------------------
......................CAGCATCTTCTTGGGGAT.................................................................................................................................................................................................................. 181.000.00--------------------------------------------1.00----------------------------------------
...............................................................................................................................................................................................................CCAGGTTCACGCCATTCTCCTGTAT.................. 251.000.00------------------1.00------------------------------------------------------------------
........................................................................................................................................................................................................CGTGAACCTGGGAGGCAG................................ 1801.001.00--------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................................GTGAACCTGGGAGGCAGAGCTTG................................. 2301.001.00------1.00------------------------------------------------------------------------------
........................................................................................................................................GATGGAGTCTTGCTGTGTCCAC............................................................................................ 221.000.00---1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CCTGCCTCAGCCTCCCGAGTAGCTTTTT 281.000.00---1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................CGTGAACCTGGGAGGCAGAGCTTGC................................ 2501.001.00------1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................................GCTCTGCCTCCCAGGTTCCC................................. 201.000.001.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCAGCAG......................... 291.000.001.00------------------------------------------------------------------------------------
....................................................................................................................................TTGAGATGGAGTCTTGCCAAG................................................................................................. 211.000.00-------------------------------1.00-----------------------------------------------------
..........................................................................................................................................................................................................GCCTCCCAGGTTCACGCCATTGT......................... 231.000.00------------------------------------------------1.00------------------------------------
.............................................................................................................................................................................................TGGCGTGAACCTGGGAGGCAGAGCTTGCAGTG............................. 3201.001.00-----1.00-------------------------------------------------------------------------------
............................................................................................................................................................................................GTGAACCTGGGAGGCAGAGCTTGCAGTGA................................. 2901.001.00-------1.00-----------------------------------------------------------------------------
...........................................................................................................................................................................................................CCTCCCAGGTTCACGCCATTGAGG....................... 241.000.00-----------------------------1.00-------------------------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCACGCCATGCAG........................ 301.000.001.00------------------------------------------------------------------------------------
........................................................................................................................................................................................................CTGCCTCCCAGGTTCACTGCA............................. 211.000.00---------------------------------------------------1.00---------------------------------
..................................................................................................................................................................................................CAAGCTCTGCCTCCCAGGTTCAGAA............................... 251.000.00----------------------------------------------------------------------------------1.00--
...................................................................................................................................................................................................................GTTCACGCCATTCTCCTGCCTCAGCCAAA.......... 291.000.00-------------------------------------------1.00-----------------------------------------
....................................................................................................................................................................................................AGCTCTGCCTCCCAGGTTCAACAG.............................. 241.000.001.00------------------------------------------------------------------------------------