ID: uc002klm.3_intron_34_0_chr18_2760738_f.5p
GENE: (35)
chr18:2760688-2760937+


(13)
BRAIN 		(2)
BREAST 		(7)
CELL-LINE 		(2)
LIVER 		(3)
OTHER 		(6)
SKIN

Sense strand
TCCAGTTTGGTTTTATGATGGATAAAACAAATATTCTCAACAGTGAACAGGTTTGCTTACTTTTTTTATATACCACAGTTAGCTTTACATTTTCTTTTTTTTTCCCTCTTGGTTCTGCATTACATGAAATAGCTTCACATTTTCTCATTTAGTTTATGAATGAAATATTTTGTTTAAAAGTGAAGTAATTATTGGATGTGAAATATAAATAATTCAATTTTCAGGAAAATTAGTATATAATATGTTTAAA
..................................................((..(((.(((...............))).)))...))................((....))..........................................................................................................................................
..................................................51..............................................................115.....................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................TCTTTTTTTTTCCCTCTTG...........................................................................................................................................19235.5035.5010.5011.501.006.005.501.00---------------------------
.......................................ACAGTGAACAGGTTTCTTT................................................................................................................................................................................................1934.000.00-------5.003.002.004.004.003.003.00-3.001.002.00-1.00-1.00--1.00-1.00------
..................................................................................CTTTACATTTTCTTTTCCCC....................................................................................................................................................203.000.00--------------3.00------------------
............................................................................................TCTTTTTTTTTCCCTCTTGGG.........................................................................................................................................212.000.00--1.00--1.00---------------------------
................................................................TTTATATACCACAGTATT........................................................................................................................................................................182.000.00------------------1.00--------1.00-----
.......................................ACAGTGAACAGGTTTCTTA................................................................................................................................................................................................192.000.00-------1.00--------1.00----------------
..........................................................................................TTTCTTTTTTTTTCCCTCTTG...........................................................................................................................................2112.002.00--1.00---1.00--------------------------
..................................................................................CTTTACATTTTCTTTTTTTTTCCCTCTTG...........................................................................................................................................2912.002.002.00--------------------------------
.....................................................................................TACATTTTCTTTTTTTTCTTG................................................................................................................................................212.000.001.00--1.00-----------------------------
.............................................................................................CTTTTTTTTTCCCTCTTG...........................................................................................................................................1871.571.570.140.43-0.430.57----------------------------
............................................................................................TCTTTTTTTTTCCCTCTTGTGC........................................................................................................................................2221.5035.50--1.50------------------------------
..........................................................................................TTTCTTTTTTTTTCCCTCTTGTGC........................................................................................................................................2411.002.00------1.00--------------------------
...................................................TTTGCTTACTTTTTTTAG.....................................................................................................................................................................................181.000.00------1.00--------------------------
.....................................................................................................................................TTCACATTTTCTCATTTCCTC................................................................................................211.000.00----------------------------1.00----
............................................................................................TCTTTTTTTTTCCCTCTGGTG.........................................................................................................................................211.000.00-----1.00---------------------------
........................................................................................ATTTTCTTTTTTTTTCCCG...............................................................................................................................................191.000.001.00--------------------------------
.....................ATAAAACAAATATTCTCAACAGTGAACAGGTTAT...................................................................................................................................................................................................341.000.00----------------------1.00----------
....................................................................................TTACATTTTCTTTTTTAATG..................................................................................................................................................201.000.00-1.00-------------------------------
.....................................................................................TACATTTTCTTTTTTTTGG..................................................................................................................................................191.000.00-1.00-------------------------------
......................................................................................ACATTTTCTTTTTTTTTCG.................................................................................................................................................191.000.00-1.00-------------------------------
.....................................................................................TACATTTTCTTTTTTTTAC..................................................................................................................................................191.000.00-----1.00---------------------------
.........................................................................................TTTTCTTTTTTTTTCCCTACC............................................................................................................................................211.000.00--1.00------------------------------
.........................................................................................TTTTCTTTTTTTTTCCCTCTTTTAG........................................................................................................................................251.000.00-1.00-------------------------------
............................................................................................TCTTTTTTTTTCCCTCTTGTG.........................................................................................................................................2121.0035.50--0.50---0.50--------------------------
..........................................................................................TTTCTTTTTTTTTCCCTCTTTGTC........................................................................................................................................241.000.00--1.00------------------------------
.......................................ACAGTGAACAGGTTTGCTTACTTTTTTTATA....................................................................................................................................................................................3111.001.00--1.00------------------------------
.....................................................................................TACATTTTCTTTTTTTTTAAG................................................................................................................................................211.000.001.00--------------------------------
..........................................................................................TTTCTTTTTTTTTCCCTCTTT...........................................................................................................................................211.000.00------1.00--------------------------
.....................................................................................TACATTTTCTTTTTTTTTCTAG...............................................................................................................................................221.000.001.00--------------------------------
........................................................................................................................................................................................GTAATTATTGGATGTGAAATATAA..........................................2411.001.00-----------------------------1.00---
..........................................................................................TTTCTTTTTTTTTCCCTCTTGACC........................................................................................................................................2411.002.00--1.00------------------------------
.....................................................................................TACATTTTCTTTTTTTTTCTG................................................................................................................................................211.000.00-1.00-------------------------------
.........................................................................................TTTTCTTTTTTTTTCCCTCGAG...........................................................................................................................................221.000.00------1.00--------------------------
......................................................................................ACATTTTCTTTTTTTTTAAGC...............................................................................................................................................211.000.00-----1.00---------------------------
......................................................................................ACATTTTCTTTTTTTTTCCGGAG.............................................................................................................................................231.000.00--1.00------------------------------
...........................................................CTTTTTTTATATACCACAGTTAGCTT.....................................................................................................................................................................2611.001.00-------------------------1.00-------
.........................................................................................TTTTCTTTTTTTTTCCCTCTGTT..........................................................................................................................................231.000.00--1.00------------------------------
.....................................CAACAGTGAACAGGTTTCTTC................................................................................................................................................................................................211.000.00---------1.00-----------------------
..........................................................................................TTTCTTTTTTTTTCCCTCTTGTG.........................................................................................................................................2311.002.00--1.00------------------------------
.......................................ACAGTGAACAGGTTTCATT................................................................................................................................................................................................191.000.00---------1.00-----------------------
....................................................................................TTACATTTTCTTTTTTTTCTG.................................................................................................................................................211.000.00-1.00-------------------------------
.....................................................................................................................................TTCACATTTTCTCATTAACA.................................................................................................201.000.00-------------------------------1.00-
.......................................ACAGTGAACAGGTTTTTTT................................................................................................................................................................................................191.000.00----------------1.00----------------
.......................................ACAGTGAACAGGTTTCTT.................................................................................................................................................................................................181.000.00--------1.00------------------------
....................................................................................TTACATTTTCTTTTTTTTTTGTG...............................................................................................................................................231.000.001.00--------------------------------
..................................................................................CTTTACATTTTCTTTTTTTGTTT.................................................................................................................................................231.000.00-----1.00---------------------------
......................................................................................ACATTTTCTTTTTTTTTCCGAG..............................................................................................................................................221.000.00------1.00--------------------------
..CAGTTTGGTTTTATGATGGATAAA................................................................................................................................................................................................................................2411.001.00--------------------1.00------------
.......................................................................................CATTTTCTTTTTTTTTCCACAT.............................................................................................................................................221.000.00---1.00-----------------------------
...................................................................................TTTACATTTTCTTTTTTTCTG..................................................................................................................................................211.000.001.00--------------------------------
..................................................................................CTTTACATTTTCTTTTTTTTTTTT................................................................................................................................................241.000.00----1.00----------------------------
............................................................................................TCTTTTTTTTTCCCTCTTGTGCT.......................................................................................................................................2320.5035.50--0.50------------------------------

Antisense strand
TCCAGTTTGGTTTTATGATGGATAAAACAAATATTCTCAACAGTGAACAGGTTTGCTTACTTTTTTTATATACCACAGTTAGCTTTACATTTTCTTTTTTTTTCCCTCTTGGTTCTGCATTACATGAAATAGCTTCACATTTTCTCATTTAGTTTATGAATGAAATATTTTGTTTAAAAGTGAAGTAATTATTGGATGTGAAATATAAATAATTCAATTTTCAGGAAAATTAGTATATAATATGTTTAAA
..................................................((..(((.(((...............))).)))...))................((....))..........................................................................................................................................
..................................................51..............................................................115.....................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................AGTTAGCTTTACATTTAG............................................................................................................................................................ 181.000.00------------------------------1.00--
...........................................................................................................................................................ATGAATGAAATATTTCAAC............................................................................ 191.000.00-----1.00---------------------------
....................................................................................TTACATTTTCTTTTTTTCGTA................................................................................................................................................. 211.000.00-----------------------1.00---------
..........................................................................................................................GTGAAGCTATTTCATG................................................................................................................ 1640.250.25--------------------------------0.25